RNA–Protein interactions for RNA: ENST00000466763.5

UBA3-209, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-209ENST00000466763 KCNMB1Q16558 191 aa12.03□□□□□ -0.48
UBA3-209ENST00000466763 TMEM154Q6P9G4 183 aa12.03□□□□□ -0.48
UBA3-209ENST00000466763 LYPD4Q6UWN0 246 aa12.03□□□□□ -0.48
UBA3-209ENST00000466763 ZNF771Q7L3S4 317 aaPredicted RBP12.03□□□□□ -0.48
UBA3-209ENST00000466763 CXXC5Q7LFL8 322 aaKnown RBP12.03□□□□□ -0.48
UBA3-209ENST00000466763 SYT9Q86SS6 491 aa12.03□□□□□ -0.48
UBA3-209ENST00000466763 ZNF584Q8IVC4 421 aa12.03□□□□□ -0.48
UBA3-209ENST00000466763 FBXL14Q8N1E6 418 aa12.03□□□□□ -0.48
UBA3-209ENST00000466763 ZNF511Q8NB15 262 aa12.03□□□□□ -0.48
UBA3-209ENST00000466763 CPEB3Q8NE35 698 aaKnown RBP12.03□□□□□ -0.48
UBA3-209ENST00000466763 DHRS9Q9BPW9 319 aa12.03□□□□□ -0.48
UBA3-209ENST00000466763 HCAR1Q9BXC0 346 aa12.03□□□□□ -0.48
UBA3-209ENST00000466763 NMNAT2Q9BZQ4 307 aa12.03□□□□□ -0.48
UBA3-209ENST00000466763 FAIMQ9NVQ4 179 aa12.03□□□□□ -0.48
UBA3-209ENST00000466763 PLEK2Q9NYT0 353 aa12.03□□□□□ -0.48
UBA3-209ENST00000466763 ZAR1LA6NP61 321 aa12.02□□□□□ -0.49
UBA3-209ENST00000466763 VSTM5A8MXK1 200 aa12.02□□□□□ -0.49
UBA3-209ENST00000466763 H0YHG0 523 aa12.02□□□□□ -0.49
UBA3-209ENST00000466763 M0R129 80 aa12.02□□□□□ -0.49
UBA3-209ENST00000466763 RER1O15258 196 aa12.02□□□□□ -0.49
UBA3-209ENST00000466763 ATE1O95260 518 aa12.02□□□□□ -0.49
UBA3-209ENST00000466763 ALPLP05186 524 aa12.02□□□□□ -0.49
UBA3-209ENST00000466763 SPARCP09486 303 aa12.02□□□□□ -0.49
UBA3-209ENST00000466763 FAM157BP0CG42 384 aa12.02□□□□□ -0.49
UBA3-209ENST00000466763 APOBEC3AP31941 199 aaPredicted RBP12.02□□□□□ -0.49
UBA3-209ENST00000466763 HTR5AP47898 357 aa12.02□□□□□ -0.49
UBA3-209ENST00000466763 ELF3P78545 371 aaPredicted RBP12.02□□□□□ -0.49
UBA3-209ENST00000466763 TRIP10Q15642 601 aa12.02□□□□□ -0.49
UBA3-209ENST00000466763 LRRC36Q1X8D7 754 aa12.02□□□□□ -0.49
UBA3-209ENST00000466763 SLX4IPQ5VYV7 408 aa12.02□□□□□ -0.49
UBA3-209ENST00000466763 PAQR4Q8N4S7 273 aaPredicted RBP12.02□□□□□ -0.49
UBA3-209ENST00000466763 TCEANCQ8N8B7 351 aa12.02□□□□□ -0.49
UBA3-209ENST00000466763 TMEM171Q8WVE6 324 aa12.02□□□□□ -0.49
UBA3-209ENST00000466763 PTP4A1Q93096 173 aa12.02□□□□□ -0.49
UBA3-209ENST00000466763 SLC29A1Q99808 456 aa12.02□□□□□ -0.49
UBA3-209ENST00000466763 WACQ9BTA9 647 aa12.02□□□□□ -0.49
UBA3-209ENST00000466763 HINT3Q9NQE9 182 aaKnown RBP12.02□□□□□ -0.49
UBA3-209ENST00000466763 MRPL22Q9NWU5 206 aaKnown RBP12.02□□□□□ -0.49
UBA3-209ENST00000466763 USE1Q9NZ43 259 aa12.02□□□□□ -0.49
UBA3-209ENST00000466763 EIF3KQ9UBQ5 218 aaKnown RBP12.02□□□□□ -0.49
UBA3-209ENST00000466763 APCP25054 2843 aa12.02□□□□□ -0.49
UBA3-209ENST00000466763 ANKRD17O75179 2603 aaKnown RBP12.02□□□□□ -0.49
UBA3-209ENST00000466763 TLX2O43763 284 aaPredicted RBP12.01□□□□□ -0.49
UBA3-209ENST00000466763 PRKYO43930 277 aa12.01□□□□□ -0.49
UBA3-209ENST00000466763 TMCC2O75069 709 aa12.01□□□□□ -0.49
UBA3-209ENST00000466763 GLCEO94923 617 aa12.01□□□□□ -0.49
UBA3-209ENST00000466763 LCKP06239 509 aa12.01□□□□□ -0.49
UBA3-209ENST00000466763 ZNF35P13682 527 aa12.01□□□□□ -0.49
UBA3-209ENST00000466763 CD53P19397 219 aa12.01□□□□□ -0.49
UBA3-209ENST00000466763 TTKP33981 857 aa12.01□□□□□ -0.49
UBA3-209ENST00000466763 THBS4P35443 961 aa12.01□□□□□ -0.49
UBA3-209ENST00000466763 RPS27P42677 84 aaKnown RBP12.01□□□□□ -0.49
UBA3-209ENST00000466763 BLVRAP53004 296 aa12.01□□□□□ -0.49
UBA3-209ENST00000466763 AGAP6Q5VW22 663 aa12.01□□□□□ -0.49
UBA3-209ENST00000466763 ERI1Q8IV48 349 aaKnown RBP12.01□□□□□ -0.49
UBA3-209ENST00000466763 MUC15Q8N387 334 aa12.01□□□□□ -0.49
UBA3-209ENST00000466763 GALNT4Q8N4A0 578 aa12.01□□□□□ -0.49
UBA3-209ENST00000466763 BBS1Q8NFJ9 593 aa12.01□□□□□ -0.49
UBA3-209ENST00000466763 GJC3Q8NFK1 279 aa12.01□□□□□ -0.49
UBA3-209ENST00000466763 OR6N2Q8NGY6 317 aa12.01□□□□□ -0.49
UBA3-209ENST00000466763 PIGTQ969N2 578 aa12.01□□□□□ -0.49
UBA3-209ENST00000466763 ZMYND19Q96E35 227 aaPredicted RBP12.01□□□□□ -0.49
UBA3-209ENST00000466763 IL4I1Q96RQ9 567 aa12.01□□□□□ -0.49
UBA3-209ENST00000466763 PITX2Q99697 317 aa12.01□□□□□ -0.49
UBA3-209ENST00000466763 GABARAPL3Q9BY60 117 aa12.01□□□□□ -0.49
UBA3-209ENST00000466763 WDR76Q9H967 626 aa12.01□□□□□ -0.49
UBA3-209ENST00000466763 CA10Q9NS85 328 aa12.01□□□□□ -0.49
UBA3-209ENST00000466763 H2AFY2Q9P0M6 372 aaPredicted RBP12.01□□□□□ -0.49
UBA3-209ENST00000466763 LHFPL6Q9Y693 200 aa12.01□□□□□ -0.49
UBA3-209ENST00000466763 RAI1Q7Z5J4 1906 aaPredicted RBP12.01□□□□□ -0.49
UBA3-209ENST00000466763 HRNRQ86YZ3 2850 aaPredicted RBP12□□□□□ -0.49
UBA3-209ENST00000466763 FBN2P35556 2912 aa12□□□□□ -0.49
UBA3-209ENST00000466763 LOC100509620A0A075B734 347 aa12□□□□□ -0.49
UBA3-209ENST00000466763 ZNF593O00488 134 aaPredicted RBP12□□□□□ -0.49
UBA3-209ENST00000466763 SOD3P08294 240 aa12□□□□□ -0.49
UBA3-209ENST00000466763 NR4A1P22736 598 aa12□□□□□ -0.49
UBA3-209ENST00000466763 GSTT1P30711 240 aa12□□□□□ -0.49
UBA3-209ENST00000466763 ENTPD1P49961 510 aa12□□□□□ -0.49
UBA3-209ENST00000466763 APOFQ13790 326 aa12□□□□□ -0.49
UBA3-209ENST00000466763 CCDC92Q53HC0 331 aaPredicted RBP12□□□□□ -0.49
UBA3-209ENST00000466763 LPCAT4Q643R3 524 aa12□□□□□ -0.49
UBA3-209ENST00000466763 C12orf73Q69YU5 71 aa12□□□□□ -0.49
UBA3-209ENST00000466763 ZNF544Q6NX49 715 aa12□□□□□ -0.49
UBA3-209ENST00000466763 VASH1Q7L8A9 365 aaPredicted RBP12□□□□□ -0.49
UBA3-209ENST00000466763 NUP37Q8NFH4 326 aa12□□□□□ -0.49
UBA3-209ENST00000466763 OR1F12Q8NHA8 337 aa12□□□□□ -0.49
UBA3-209ENST00000466763 NINJ1Q92982 152 aa12□□□□□ -0.49
UBA3-209ENST00000466763 POM121L2Q96KW2 1035 aa12□□□□□ -0.49
UBA3-209ENST00000466763 INTS14Q96SY0 518 aa12□□□□□ -0.49
UBA3-209ENST00000466763 TOR3AQ9H497 397 aa12□□□□□ -0.49
UBA3-209ENST00000466763 KCNG2Q9UJ96 466 aa12□□□□□ -0.49
UBA3-209ENST00000466763 GDF2Q9UK05 429 aaPredicted RBP12□□□□□ -0.49
UBA3-209ENST00000466763 NDRG4Q9ULP0 352 aaKnown RBP12□□□□□ -0.49
UBA3-209ENST00000466763 GRIP1Q9Y3R0 1128 aa12□□□□□ -0.49
UBA3-209ENST00000466763 CMAHPQ9Y471 501 aa12□□□□□ -0.49
UBA3-209ENST00000466763 COMMD3-BMI1R4GMX3 469 aa12□□□□□ -0.49
UBA3-209ENST00000466763 USF3Q68DE3 2245 aa12□□□□□ -0.49
UBA3-209ENST00000466763 ARID1AO14497 2285 aa11.99□□□□□ -0.49
UBA3-209ENST00000466763 GPRIN2O60269 458 aa11.99□□□□□ -0.49
UBA3-209ENST00000466763 SMPD2O60906 423 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms