RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 JSRP1Q96MG2 331 aaPredicted RBP2.78□□□□□ -1.96
CDC42BPA-211ENST00000466538 ACTR3CQ9C0K3 210 aaPredicted RBP2.78□□□□□ -1.96
CDC42BPA-211ENST00000466538 CCNB1IP1Q9NPC3 277 aa2.78□□□□□ -1.96
CDC42BPA-211ENST00000466538 PSME2Q9UL46 239 aa2.78□□□□□ -1.96
CDC42BPA-211ENST00000466538 SCN2AQ99250 2005 aa2.78□□□□□ -1.96
CDC42BPA-211ENST00000466538 IGLV1-50A0A075B6I6 118 aa2.77□□□□□ -1.97
CDC42BPA-211ENST00000466538 TRAV25A0A0B4J276 109 aa2.77□□□□□ -1.97
CDC42BPA-211ENST00000466538 KRTAP9-6A8MVA2 160 aa2.77□□□□□ -1.97
CDC42BPA-211ENST00000466538 C11orf94C9JXX5 98 aa2.77□□□□□ -1.97
CDC42BPA-211ENST00000466538 SNAI2O43623 268 aa2.77□□□□□ -1.97
CDC42BPA-211ENST00000466538 CD160O95971 181 aa2.77□□□□□ -1.97
CDC42BPA-211ENST00000466538 HLA-DPB1P04440 258 aa2.77□□□□□ -1.97
CDC42BPA-211ENST00000466538 PRPS2P11908 318 aa2.77□□□□□ -1.97
CDC42BPA-211ENST00000466538 GZMAP12544 262 aa2.77□□□□□ -1.97
CDC42BPA-211ENST00000466538 AZU1P20160 251 aa2.77□□□□□ -1.97
CDC42BPA-211ENST00000466538 CLDN18P56856 261 aa2.77□□□□□ -1.97
CDC42BPA-211ENST00000466538 ERCC8Q13216 396 aa2.77□□□□□ -1.97
CDC42BPA-211ENST00000466538 NCF4Q15080 339 aa2.77□□□□□ -1.97
CDC42BPA-211ENST00000466538 ZNF726P1Q15940 193 aa2.77□□□□□ -1.97
CDC42BPA-211ENST00000466538 DEFB116Q30KQ4 102 aa2.77□□□□□ -1.97
CDC42BPA-211ENST00000466538 CHRFAM7AQ494W8 412 aa2.77□□□□□ -1.97
CDC42BPA-211ENST00000466538 PTPN20Q4JDL3 420 aa2.77□□□□□ -1.97
CDC42BPA-211ENST00000466538 ANGPTL8Q6UXH0 198 aa2.77□□□□□ -1.97
CDC42BPA-211ENST00000466538 PRSS58Q8IYP2 241 aa2.77□□□□□ -1.97
CDC42BPA-211ENST00000466538 KATNAL2Q8IYT4 538 aa2.77□□□□□ -1.97
CDC42BPA-211ENST00000466538 OFCC1Q8IZS5 231 aa2.77□□□□□ -1.97
CDC42BPA-211ENST00000466538 FAM104AQ969W3 186 aa2.77□□□□□ -1.97
CDC42BPA-211ENST00000466538 TMEM230Q96A57 120 aa2.77□□□□□ -1.97
CDC42BPA-211ENST00000466538 ZNF414Q96IQ9 312 aa2.77□□□□□ -1.97
CDC42BPA-211ENST00000466538 ZNF681Q96N22 645 aa2.77□□□□□ -1.97
CDC42BPA-211ENST00000466538 OPALINQ96PE5 141 aa2.77□□□□□ -1.97
CDC42BPA-211ENST00000466538 CHAC1Q9BUX1 264 aa2.77□□□□□ -1.97
CDC42BPA-211ENST00000466538 MRPL22Q9NWU5 206 aaKnown RBP2.77□□□□□ -1.97
CDC42BPA-211ENST00000466538 UVRAGQ9P2Y5 699 aa2.77□□□□□ -1.97
CDC42BPA-211ENST00000466538 TBC1D24Q9ULP9 559 aa2.77□□□□□ -1.97
CDC42BPA-211ENST00000466538 ZNFX1Q9P2E3 1918 aaKnown RBP2.76□□□□□ -1.97
CDC42BPA-211ENST00000466538 A6NDN8 102 aa2.76□□□□□ -1.97
CDC42BPA-211ENST00000466538 NCF1BA6NI72 391 aaPredicted RBP2.76□□□□□ -1.97
CDC42BPA-211ENST00000466538 NCF1CA8MVU1 366 aaPredicted RBP2.76□□□□□ -1.97
CDC42BPA-211ENST00000466538 GOLGA8TH3BQL2 631 aa2.76□□□□□ -1.97
CDC42BPA-211ENST00000466538 M0R3G1 203 aa2.76□□□□□ -1.97
CDC42BPA-211ENST00000466538 AIREO43918 545 aa2.76□□□□□ -1.97
CDC42BPA-211ENST00000466538 GABARAPO95166 117 aa2.76□□□□□ -1.97
CDC42BPA-211ENST00000466538 SLC25A14O95258 325 aaPredicted RBP2.76□□□□□ -1.97
CDC42BPA-211ENST00000466538 LSM8O95777 96 aaKnown RBP2.76□□□□□ -1.97
CDC42BPA-211ENST00000466538 HLA-HP01893 362 aa2.76□□□□□ -1.97
CDC42BPA-211ENST00000466538 ARG1P05089 322 aa2.76□□□□□ -1.97
CDC42BPA-211ENST00000466538 UBTFL6P0CB48 400 aaPredicted RBP2.76□□□□□ -1.97
CDC42BPA-211ENST00000466538 STAG3L3P0CL85 134 aa2.76□□□□□ -1.97
CDC42BPA-211ENST00000466538 ATF6P18850 670 aa2.76□□□□□ -1.97
CDC42BPA-211ENST00000466538 MAGEA1P43355 309 aa2.76□□□□□ -1.97
CDC42BPA-211ENST00000466538 RND2P52198 227 aa2.76□□□□□ -1.97
CDC42BPA-211ENST00000466538 ZNF138P52744 262 aa2.76□□□□□ -1.97
CDC42BPA-211ENST00000466538 CRISP1P54107 249 aa2.76□□□□□ -1.97
CDC42BPA-211ENST00000466538 SEMG2Q02383 582 aa2.76□□□□□ -1.97
CDC42BPA-211ENST00000466538 SPAG1Q07617 926 aa2.76□□□□□ -1.97
CDC42BPA-211ENST00000466538 ITIH4Q14624 930 aa2.76□□□□□ -1.97
CDC42BPA-211ENST00000466538 MBOAT1Q6ZNC8 495 aa2.76□□□□□ -1.97
CDC42BPA-211ENST00000466538 TMCO2Q7Z6W1 182 aaPredicted RBP2.76□□□□□ -1.97
CDC42BPA-211ENST00000466538 NPWQ8N729 165 aa2.76□□□□□ -1.97
CDC42BPA-211ENST00000466538 C15orf56Q8N910 161 aa2.76□□□□□ -1.97
CDC42BPA-211ENST00000466538 NUBPLQ8TB37 319 aa2.76□□□□□ -1.97
CDC42BPA-211ENST00000466538 GLYATL2Q8WU03 294 aa2.76□□□□□ -1.97
CDC42BPA-211ENST00000466538 ABHD3Q8WU67 409 aa2.76□□□□□ -1.97
CDC42BPA-211ENST00000466538 PEX13Q92968 403 aa2.76□□□□□ -1.97
CDC42BPA-211ENST00000466538 NTAN1Q96AB6 310 aa2.76□□□□□ -1.97
CDC42BPA-211ENST00000466538 MRGPRFQ96AM1 343 aa2.76□□□□□ -1.97
CDC42BPA-211ENST00000466538 LINC00167Q96N53 147 aa2.76□□□□□ -1.97
CDC42BPA-211ENST00000466538 FOPNLQ96NB1 174 aa2.76□□□□□ -1.97
CDC42BPA-211ENST00000466538 ZNF285Q96NJ3 590 aa2.76□□□□□ -1.97
CDC42BPA-211ENST00000466538 OR2A5Q96R48 311 aa2.76□□□□□ -1.97
CDC42BPA-211ENST00000466538 MICU1Q9BPX6 476 aa2.76□□□□□ -1.97
CDC42BPA-211ENST00000466538 ANKRD60Q9BZ19 345 aa2.76□□□□□ -1.97
CDC42BPA-211ENST00000466538 ZNF223Q9UK11 482 aaPredicted RBP2.76□□□□□ -1.97
CDC42BPA-211ENST00000466538 KLK12Q9UKR0 248 aa2.76□□□□□ -1.97
CDC42BPA-211ENST00000466538 TTC41PQ6P2S7 1318 aa2.75□□□□□ -1.97
CDC42BPA-211ENST00000466538 ARHGAP21Q5T5U3 1957 aa2.75□□□□□ -1.97
CDC42BPA-211ENST00000466538 BCHEP06276 602 aa2.75□□□□□ -1.97
CDC42BPA-211ENST00000466538 CLTAP09496 248 aa2.75□□□□□ -1.97
CDC42BPA-211ENST00000466538 TLX1NBP0CAT3 122 aa2.75□□□□□ -1.97
CDC42BPA-211ENST00000466538 CTRB1P17538 263 aa2.75□□□□□ -1.97
CDC42BPA-211ENST00000466538 RAB3AP20336 220 aa2.75□□□□□ -1.97
CDC42BPA-211ENST00000466538 OR1E1P30953 314 aa2.75□□□□□ -1.97
CDC42BPA-211ENST00000466538 RAD51Q06609 339 aa2.75□□□□□ -1.97
CDC42BPA-211ENST00000466538 MADCAM1Q13477 382 aa2.75□□□□□ -1.97
CDC42BPA-211ENST00000466538 PON2Q15165 354 aa2.75□□□□□ -1.97
CDC42BPA-211ENST00000466538 FBXW12Q6X9E4 464 aa2.75□□□□□ -1.97
CDC42BPA-211ENST00000466538 TIFABQ6ZNK6 161 aa2.75□□□□□ -1.97
CDC42BPA-211ENST00000466538 APRG1Q8IVJ8 170 aa2.75□□□□□ -1.97
CDC42BPA-211ENST00000466538 FAM86B1Q8N7N1 296 aa2.75□□□□□ -1.97
CDC42BPA-211ENST00000466538 C8orf31Q8N9H6 132 aa2.75□□□□□ -1.97
CDC42BPA-211ENST00000466538 CHST4Q8NCG5 386 aa2.75□□□□□ -1.97
CDC42BPA-211ENST00000466538 TEKT3Q9BXF9 490 aa2.75□□□□□ -1.97
CDC42BPA-211ENST00000466538 UCK2Q9BZX2 261 aa2.75□□□□□ -1.97
CDC42BPA-211ENST00000466538 VCXQ9H320 206 aa2.75□□□□□ -1.97
CDC42BPA-211ENST00000466538 SAV1Q9H4B6 383 aaPredicted RBP2.75□□□□□ -1.97
CDC42BPA-211ENST00000466538 SYNDIG1Q9H7V2 258 aa2.75□□□□□ -1.97
CDC42BPA-211ENST00000466538 UBE2ZQ9H832 354 aaPredicted RBP2.75□□□□□ -1.97
CDC42BPA-211ENST00000466538 MRM3Q9HC36 420 aaKnown RBP2.75□□□□□ -1.97
CDC42BPA-211ENST00000466538 LYRM4Q9HD34 91 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms