RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 CSNK2BP67870 215 aa9.72□□□□□ -0.85
VCP-204ENST00000466100 TUBA1BP68363 451 aa9.72□□□□□ -0.85
VCP-204ENST00000466100 TUBA4AP68366 448 aa9.72□□□□□ -0.85
VCP-204ENST00000466100 SLC35A2P78381 396 aa9.72□□□□□ -0.85
VCP-204ENST00000466100 TAB1Q15750 504 aa9.72□□□□□ -0.85
VCP-204ENST00000466100 CCDC92Q53HC0 331 aaPredicted RBP9.72□□□□□ -0.85
VCP-204ENST00000466100 RBM48Q5RL73 367 aaKnown RBP9.72□□□□□ -0.85
VCP-204ENST00000466100 C1QTNF12Q5T7M4 302 aa9.72□□□□□ -0.85
VCP-204ENST00000466100 CORO6Q6QEF8 472 aa9.72□□□□□ -0.85
VCP-204ENST00000466100 CFAP77Q6ZQR2 320 aa9.72□□□□□ -0.85
VCP-204ENST00000466100 TUBA1AQ71U36 451 aa9.72□□□□□ -0.85
VCP-204ENST00000466100 SLC16A14Q7RTX9 510 aa9.72□□□□□ -0.85
VCP-204ENST00000466100 DPPA2Q7Z7J5 298 aa9.72□□□□□ -0.85
VCP-204ENST00000466100 P2RY8Q86VZ1 359 aa9.72□□□□□ -0.85
VCP-204ENST00000466100 SLC35F2Q8IXU6 374 aa9.72□□□□□ -0.85
VCP-204ENST00000466100 CCDC36Q8IYA8 594 aa9.72□□□□□ -0.85
VCP-204ENST00000466100 ZNF786Q8N393 782 aa9.72□□□□□ -0.85
VCP-204ENST00000466100 ACBD4Q8NC06 268 aa9.72□□□□□ -0.85
VCP-204ENST00000466100 OR6N2Q8NGY6 317 aa9.72□□□□□ -0.85
VCP-204ENST00000466100 MAP6Q96JE9 813 aa9.72□□□□□ -0.85
VCP-204ENST00000466100 WNT5BQ9H1J7 359 aa9.72□□□□□ -0.85
VCP-204ENST00000466100 DUSP21Q9H596 190 aa9.72□□□□□ -0.85
VCP-204ENST00000466100 PNRC2Q9NPJ4 139 aaKnown RBP9.72□□□□□ -0.85
VCP-204ENST00000466100 CRNNQ9UBG3 495 aaPredicted RBP9.72□□□□□ -0.85
VCP-204ENST00000466100 GDF2Q9UK05 429 aaPredicted RBP9.72□□□□□ -0.85
VCP-204ENST00000466100 MYRFQ9Y2G1 1151 aa9.72□□□□□ -0.85
VCP-204ENST00000466100 AMDHD2Q9Y303 409 aa9.72□□□□□ -0.85
VCP-204ENST00000466100 ROS1P08922 2347 aa9.72□□□□□ -0.85
VCP-204ENST00000466100 A0A1W2PR80 420 aa9.71□□□□□ -0.86
VCP-204ENST00000466100 OR6C6A6NF89 314 aa9.71□□□□□ -0.86
VCP-204ENST00000466100 EFCAB10A6NFE3 127 aa9.71□□□□□ -0.86
VCP-204ENST00000466100 RER1O15258 196 aa9.71□□□□□ -0.86
VCP-204ENST00000466100 FAM20BO75063 409 aa9.71□□□□□ -0.86
VCP-204ENST00000466100 UBL3O95164 117 aa9.71□□□□□ -0.86
VCP-204ENST00000466100 HTR1AP08908 422 aa9.71□□□□□ -0.86
VCP-204ENST00000466100 SPARCP09486 303 aa9.71□□□□□ -0.86
VCP-204ENST00000466100 ALOX5APP20292 161 aa9.71□□□□□ -0.86
VCP-204ENST00000466100 PSG4Q00888 419 aa9.71□□□□□ -0.86
VCP-204ENST00000466100 MVKQ03426 396 aa9.71□□□□□ -0.86
VCP-204ENST00000466100 ZNF85Q03923 595 aa9.71□□□□□ -0.86
VCP-204ENST00000466100 SLC36A2Q495M3 483 aa9.71□□□□□ -0.86
VCP-204ENST00000466100 KLHL22Q53GT1 634 aa9.71□□□□□ -0.86
VCP-204ENST00000466100 AHSA2Q719I0 299 aa9.71□□□□□ -0.86
VCP-204ENST00000466100 SSX6Q7RTT6 188 aa9.71□□□□□ -0.86
VCP-204ENST00000466100 DCXRQ7Z4W1 244 aa9.71□□□□□ -0.86
VCP-204ENST00000466100 MDP1Q86V88 176 aa9.71□□□□□ -0.86
VCP-204ENST00000466100 ZNF584Q8IVC4 421 aa9.71□□□□□ -0.86
VCP-204ENST00000466100 ZNF454Q8N9F8 522 aa9.71□□□□□ -0.86
VCP-204ENST00000466100 SSC4DQ8WTU2 575 aa9.71□□□□□ -0.86
VCP-204ENST00000466100 NANOS1Q8WY41 292 aaKnown RBP9.71□□□□□ -0.86
VCP-204ENST00000466100 MNTQ99583 582 aa9.71□□□□□ -0.86
VCP-204ENST00000466100 USB1Q9BQ65 265 aaKnown RBP9.71□□□□□ -0.86
VCP-204ENST00000466100 ABHD6Q9BV23 337 aa9.71□□□□□ -0.86
VCP-204ENST00000466100 YTHDF1Q9BYJ9 559 aaKnown RBP9.71□□□□□ -0.86
VCP-204ENST00000466100 OR2H1Q9GZK4 316 aa9.71□□□□□ -0.86
VCP-204ENST00000466100 DIMT1Q9UNQ2 313 aaKnown RBP9.71□□□□□ -0.86
VCP-204ENST00000466100 POLR1DQ9Y2S0 133 aa9.71□□□□□ -0.86
VCP-204ENST00000466100 NBPF19A0A087WUL8 3843 aa9.7□□□□□ -0.86
VCP-204ENST00000466100 A0A1W2PQL4 384 aaPredicted RBP9.7□□□□□ -0.86
VCP-204ENST00000466100 IRGMA1A4Y4 181 aa9.7□□□□□ -0.86
VCP-204ENST00000466100 C19orf84I3L1E1 186 aa9.7□□□□□ -0.86
VCP-204ENST00000466100 SYNGR3O43761 229 aa9.7□□□□□ -0.86
VCP-204ENST00000466100 FADS2O95864 444 aaKnown RBP9.7□□□□□ -0.86
VCP-204ENST00000466100 IGKV3-15P01624 115 aa9.7□□□□□ -0.86
VCP-204ENST00000466100 IGLV1-44P01699 117 aa9.7□□□□□ -0.86
VCP-204ENST00000466100 OR2T7P0C7T2 308 aa9.7□□□□□ -0.86
VCP-204ENST00000466100 LIMS3P0CW19 117 aa9.7□□□□□ -0.86
VCP-204ENST00000466100 LIMS4P0CW20 117 aa9.7□□□□□ -0.86
VCP-204ENST00000466100 PPP3CBP16298 524 aa9.7□□□□□ -0.86
VCP-204ENST00000466100 ZNF14P17017 642 aaPredicted RBP9.7□□□□□ -0.86
VCP-204ENST00000466100 GABARAPL2P60520 117 aa9.7□□□□□ -0.86
VCP-204ENST00000466100 UBE2NP61088 152 aaKnown RBP9.7□□□□□ -0.86
VCP-204ENST00000466100 PCBD1P61457 104 aa9.7□□□□□ -0.86
VCP-204ENST00000466100 ACTC1P68032 377 aa9.7□□□□□ -0.86
VCP-204ENST00000466100 ACTA1P68133 377 aa9.7□□□□□ -0.86
VCP-204ENST00000466100 ROM1Q03395 351 aa9.7□□□□□ -0.86
VCP-204ENST00000466100 SCRN3Q0VDG4 424 aa9.7□□□□□ -0.86
VCP-204ENST00000466100 ST3GAL4Q11206 333 aa9.7□□□□□ -0.86
VCP-204ENST00000466100 PPA1Q15181 289 aa9.7□□□□□ -0.86
VCP-204ENST00000466100 RAB35Q15286 201 aa9.7□□□□□ -0.86
VCP-204ENST00000466100 KRTAP27-1Q3LI81 207 aa9.7□□□□□ -0.86
VCP-204ENST00000466100 KCTD21Q4G0X4 260 aa9.7□□□□□ -0.86
VCP-204ENST00000466100 PABPC1L2AQ5JQF8 200 aa9.7□□□□□ -0.86
VCP-204ENST00000466100 ZNF684Q5T5D7 378 aa9.7□□□□□ -0.86
VCP-204ENST00000466100 VASH1Q7L8A9 365 aaPredicted RBP9.7□□□□□ -0.86
VCP-204ENST00000466100 MYPOPQ86VE0 399 aaPredicted RBP9.7□□□□□ -0.86
VCP-204ENST00000466100 FAM169BQ8N8A8 192 aa9.7□□□□□ -0.86
VCP-204ENST00000466100 ZNF540Q8NDQ6 660 aa9.7□□□□□ -0.86
VCP-204ENST00000466100 GJC3Q8NFK1 279 aa9.7□□□□□ -0.86
VCP-204ENST00000466100 OR2T27Q8NH04 317 aa9.7□□□□□ -0.86
VCP-204ENST00000466100 OR52N5Q8NH56 324 aa9.7□□□□□ -0.86
VCP-204ENST00000466100 AKR7LQ8NHP1 331 aa9.7□□□□□ -0.86
VCP-204ENST00000466100 RNF133Q8WVZ7 376 aa9.7□□□□□ -0.86
VCP-204ENST00000466100 IPCEF1Q8WWN9 437 aaPredicted RBP9.7□□□□□ -0.86
VCP-204ENST00000466100 HSD17B8Q92506 261 aa9.7□□□□□ -0.86
VCP-204ENST00000466100 LRRC46Q96FV0 321 aa9.7□□□□□ -0.86
VCP-204ENST00000466100 COPS4Q9BT78 406 aa9.7□□□□□ -0.86
VCP-204ENST00000466100 DDX28Q9NUL7 540 aaKnown RBP9.7□□□□□ -0.86
VCP-204ENST00000466100 SCN3BQ9NY72 215 aa9.7□□□□□ -0.86
VCP-204ENST00000466100 NPAP1Q9NZP6 1156 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms