RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 ROM1Q03395 351 aa17.76■□□□□ 0.43
SDF4-205ENST00000465727 OR7A5Q15622 319 aa17.76■□□□□ 0.43
SDF4-205ENST00000465727 NKPD1Q17RQ9 610 aa17.76■□□□□ 0.43
SDF4-205ENST00000465727 GFOD2Q3B7J2 385 aa17.76■□□□□ 0.43
SDF4-205ENST00000465727 FAM109BQ6ICB4 259 aaPredicted RBP17.76■□□□□ 0.43
SDF4-205ENST00000465727 CD163Q86VB7 1156 aa17.76■□□□□ 0.43
SDF4-205ENST00000465727 TMEM200AQ86VY9 491 aa17.76■□□□□ 0.43
SDF4-205ENST00000465727 FAM174AQ8TBP5 190 aa17.76■□□□□ 0.43
SDF4-205ENST00000465727 TMED6Q8WW62 240 aa17.76■□□□□ 0.43
SDF4-205ENST00000465727 SELENOIQ9C0D9 397 aa17.76■□□□□ 0.43
SDF4-205ENST00000465727 ZDHHC4Q9NPG8 344 aa17.76■□□□□ 0.43
SDF4-205ENST00000465727 SMCO4Q9NRQ5 59 aa17.76■□□□□ 0.43
SDF4-205ENST00000465727 SERGEFQ9UGK8 458 aa17.76■□□□□ 0.43
SDF4-205ENST00000465727 MRPS18BQ9Y676 258 aaKnown RBP17.76■□□□□ 0.43
SDF4-205ENST00000465727 METTL21EPA6NDL7 271 aa17.76■□□□□ 0.43
SDF4-205ENST00000465727 C5orf51A6NDU8 294 aa17.76■□□□□ 0.43
SDF4-205ENST00000465727 TMEM235A6NFC5 223 aa17.76■□□□□ 0.43
SDF4-205ENST00000465727 COLCA2A8K830 154 aa17.76■□□□□ 0.43
SDF4-205ENST00000465727 ZNF705EA8MWA4 302 aaPredicted RBP17.76■□□□□ 0.43
SDF4-205ENST00000465727 LIPCP11150 499 aa17.76■□□□□ 0.43
SDF4-205ENST00000465727 VIPR2P41587 438 aa17.76■□□□□ 0.43
SDF4-205ENST00000465727 CENPAP49450 140 aa17.76■□□□□ 0.43
SDF4-205ENST00000465727 PDGFRLQ15198 375 aa17.76■□□□□ 0.43
SDF4-205ENST00000465727 NPSR1Q6W5P4 371 aa17.76■□□□□ 0.43
SDF4-205ENST00000465727 LRRC69Q6ZNQ3 347 aa17.76■□□□□ 0.43
SDF4-205ENST00000465727 RHOUQ7L0Q8 258 aa17.76■□□□□ 0.43
SDF4-205ENST00000465727 ZSCAN1Q8NBB4 408 aa17.76■□□□□ 0.43
SDF4-205ENST00000465727 NUDCD2Q8WVJ2 157 aa17.76■□□□□ 0.43
SDF4-205ENST00000465727 MRGPRFQ96AM1 343 aa17.76■□□□□ 0.43
SDF4-205ENST00000465727 SYT4Q9H2B2 425 aa17.76■□□□□ 0.43
SDF4-205ENST00000465727 FGF22Q9HCT0 170 aa17.76■□□□□ 0.43
SDF4-205ENST00000465727 LRIT1Q9P2V4 623 aa17.76■□□□□ 0.43
SDF4-205ENST00000465727 TMED7Q9Y3B3 224 aa17.76■□□□□ 0.43
SDF4-205ENST00000465727 WIF1Q9Y5W5 379 aa17.76■□□□□ 0.43
SDF4-205ENST00000465727 A0A1W2PP55 124 aa17.75■□□□□ 0.43
SDF4-205ENST00000465727 PRSS38A1L453 326 aa17.75■□□□□ 0.43
SDF4-205ENST00000465727 OR2W5A6NFC9 320 aa17.75■□□□□ 0.43
SDF4-205ENST00000465727 LINC00587B1AMM8 73 aa17.75■□□□□ 0.43
SDF4-205ENST00000465727 UBE2CO00762 179 aa17.75■□□□□ 0.43
SDF4-205ENST00000465727 EFSO43281 561 aa17.75■□□□□ 0.43
SDF4-205ENST00000465727 CSN2P05814 226 aa17.75■□□□□ 0.43
SDF4-205ENST00000465727 MAOAP21397 527 aa17.75■□□□□ 0.43
SDF4-205ENST00000465727 PTAFRP25105 342 aa17.75■□□□□ 0.43
SDF4-205ENST00000465727 PGDP52209 483 aa17.75■□□□□ 0.43
SDF4-205ENST00000465727 MST1LQ2TV78 715 aa17.75■□□□□ 0.43
SDF4-205ENST00000465727 C1orf100Q5SVJ3 147 aa17.75■□□□□ 0.43
SDF4-205ENST00000465727 SLC18B1Q6NT16 456 aa17.75■□□□□ 0.43
SDF4-205ENST00000465727 CORO6Q6QEF8 472 aa17.75■□□□□ 0.43
SDF4-205ENST00000465727 VITQ6UXI7 678 aa17.75■□□□□ 0.43
SDF4-205ENST00000465727 SHISA5Q8N114 240 aa17.75■□□□□ 0.43
SDF4-205ENST00000465727 ZFP82Q8N141 532 aa17.75■□□□□ 0.43
SDF4-205ENST00000465727 NKAIN3Q8N8D7 197 aa17.75■□□□□ 0.43
SDF4-205ENST00000465727 OR4S1Q8NGB4 309 aa17.75■□□□□ 0.43
SDF4-205ENST00000465727 OR4C3Q8NH37 302 aa17.75■□□□□ 0.43
SDF4-205ENST00000465727 NANPQ8TBE9 248 aa17.75■□□□□ 0.43
SDF4-205ENST00000465727 OIT3Q8WWZ8 545 aa17.75■□□□□ 0.43
SDF4-205ENST00000465727 SMIM8Q96KF7 97 aa17.75■□□□□ 0.43
SDF4-205ENST00000465727 TOX2Q96NM4 488 aa17.75■□□□□ 0.43
SDF4-205ENST00000465727 CMKLR1Q99788 373 aa17.75■□□□□ 0.43
SDF4-205ENST00000465727 KXD1Q9BQD3 176 aa17.75■□□□□ 0.43
SDF4-205ENST00000465727 RHOFQ9HBH0 211 aa17.75■□□□□ 0.43
SDF4-205ENST00000465727 TAS2R4Q9NYW5 299 aa17.75■□□□□ 0.43
SDF4-205ENST00000465727 PCOLCE2Q9UKZ9 415 aa17.75■□□□□ 0.43
SDF4-205ENST00000465727 SLC22A13Q9Y226 551 aa17.75■□□□□ 0.43
SDF4-205ENST00000465727 LOC390937A0A1W2PQ73 354 aa17.75■□□□□ 0.43
SDF4-205ENST00000465727 CPED1A4D0V7 1026 aa17.75■□□□□ 0.43
SDF4-205ENST00000465727 SCAMP1O15126 338 aa17.75■□□□□ 0.43
SDF4-205ENST00000465727 EML2O95834 649 aa17.75■□□□□ 0.43
SDF4-205ENST00000465727 ERCC1P07992 297 aaPredicted RBP17.75■□□□□ 0.43
SDF4-205ENST00000465727 VAMP1P23763 118 aa17.75■□□□□ 0.43
SDF4-205ENST00000465727 HABP2Q14520 560 aaPredicted RBP17.75■□□□□ 0.43
SDF4-205ENST00000465727 CPEB4Q17RY0 729 aaKnown RBP eCLIP17.75■□□□□ 0.43
SDF4-205ENST00000465727 RNF212Q495C1 297 aa17.75■□□□□ 0.43
SDF4-205ENST00000465727 KCTD18Q6PI47 426 aaPredicted RBP17.75■□□□□ 0.43
SDF4-205ENST00000465727 KCTD9Q7L273 389 aa17.75■□□□□ 0.43
SDF4-205ENST00000465727 SLC25A44Q96H78 314 aaPredicted RBP17.75■□□□□ 0.43
SDF4-205ENST00000465727 SEC61A2Q9H9S3 476 aa17.75■□□□□ 0.43
SDF4-205ENST00000465727 A0A0B4J2A0 478 aa17.74■□□□□ 0.43
SDF4-205ENST00000465727 C5orf52A6NGY3 159 aa17.74■□□□□ 0.43
SDF4-205ENST00000465727 C1orf196B1AJZ1 125 aa17.74■□□□□ 0.43
SDF4-205ENST00000465727 GLAP06280 429 aa17.74■□□□□ 0.43
SDF4-205ENST00000465727 EIF5AP63241 154 aaKnown RBP17.74■□□□□ 0.43
SDF4-205ENST00000465727 MOGAT2Q3SYC2 334 aa17.74■□□□□ 0.43
SDF4-205ENST00000465727 ZNF260Q3ZCT1 412 aa17.74■□□□□ 0.43
SDF4-205ENST00000465727 KLHL26Q53HC5 615 aa17.74■□□□□ 0.43
SDF4-205ENST00000465727 PRRT3Q5FWE3 981 aa17.74■□□□□ 0.43
SDF4-205ENST00000465727 FAM209BQ5JX69 171 aa17.74■□□□□ 0.43
SDF4-205ENST00000465727 EIF5AL1Q6IS14 154 aaKnown RBP17.74■□□□□ 0.43
SDF4-205ENST00000465727 FJX1Q86VR8 437 aa17.74■□□□□ 0.43
SDF4-205ENST00000465727 OR10R2Q8NGX6 335 aa17.74■□□□□ 0.43
SDF4-205ENST00000465727 ADAMTS17Q8TE56 1095 aa17.74■□□□□ 0.43
SDF4-205ENST00000465727 CASTOR1Q8WTX7 329 aa17.74■□□□□ 0.43
SDF4-205ENST00000465727 SLC39A7Q92504 469 aa17.74■□□□□ 0.43
SDF4-205ENST00000465727 FAM3CQ92520 227 aa17.74■□□□□ 0.43
SDF4-205ENST00000465727 TMEM231Q9H6L2 316 aa17.74■□□□□ 0.43
SDF4-205ENST00000465727 ZMAT3Q9HA38 289 aaKnown RBP17.74■□□□□ 0.43
SDF4-205ENST00000465727 GDE1Q9NZC3 331 aa17.74■□□□□ 0.43
SDF4-205ENST00000465727 SHPKQ9UHJ6 478 aa17.74■□□□□ 0.43
SDF4-205ENST00000465727 GTF2A1LQ9UNN4 478 aa17.74■□□□□ 0.43
SDF4-205ENST00000465727 DTX4Q9Y2E6 619 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms