RNA–Protein interactions for RNA: ENST00000464764.5

CLCNKA-204, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2

Gene CLCNKA, Length 3,060 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-204ENST00000464764 KXD1Q9BQD3 176 aa11.33□□□□□ -0.6
CLCNKA-204ENST00000464764 DHDHQ9UQ10 334 aa11.33□□□□□ -0.6
CLCNKA-204ENST00000464764 MEX3AA1L020 520 aaKnown RBP11.33□□□□□ -0.6
CLCNKA-204ENST00000464764 C5orf51A6NDU8 294 aa11.33□□□□□ -0.6
CLCNKA-204ENST00000464764 ZNF208O43345 1280 aa11.33□□□□□ -0.6
CLCNKA-204ENST00000464764 FARS2O95363 451 aaKnown RBP11.33□□□□□ -0.6
CLCNKA-204ENST00000464764 ERCC1P07992 297 aaPredicted RBP11.33□□□□□ -0.6
CLCNKA-204ENST00000464764 C5AR1P21730 350 aa11.33□□□□□ -0.6
CLCNKA-204ENST00000464764 MEOX2P50222 304 aa11.33□□□□□ -0.6
CLCNKA-204ENST00000464764 RASGEF1BQ0VAM2 473 aa11.33□□□□□ -0.6
CLCNKA-204ENST00000464764 SLC17A1Q14916 467 aa11.33□□□□□ -0.6
CLCNKA-204ENST00000464764 ISXQ2M1V0 245 aa11.33□□□□□ -0.6
CLCNKA-204ENST00000464764 ATG4DQ86TL0 474 aaPredicted RBP11.33□□□□□ -0.6
CLCNKA-204ENST00000464764 OTOSQ8NHW6 89 aa11.33□□□□□ -0.6
CLCNKA-204ENST00000464764 NUDCD2Q8WVJ2 157 aa11.33□□□□□ -0.6
CLCNKA-204ENST00000464764 Q9N2J8 555 aa11.33□□□□□ -0.6
CLCNKA-204ENST00000464764 MUC22E2RYF6 1773 aaPredicted RBP11.33□□□□□ -0.6
CLCNKA-204ENST00000464764 FREM3P0C091 2139 aa11.32□□□□□ -0.6
CLCNKA-204ENST00000464764 LOC101059948A0A1B0GTJ6 334 aa11.32□□□□□ -0.6
CLCNKA-204ENST00000464764 C9orf170A2RU37 121 aa11.32□□□□□ -0.6
CLCNKA-204ENST00000464764 ASAH2BP0C7U1 165 aa11.32□□□□□ -0.6
CLCNKA-204ENST00000464764 RFC3P40938 356 aa11.32□□□□□ -0.6
CLCNKA-204ENST00000464764 ADAM8P78325 824 aa11.32□□□□□ -0.6
CLCNKA-204ENST00000464764 TFF2Q03403 129 aa11.32□□□□□ -0.6
CLCNKA-204ENST00000464764 RBM39Q14498 530 aaKnown RBP11.32□□□□□ -0.6
CLCNKA-204ENST00000464764 ELOCQ15369 112 aa11.32□□□□□ -0.6
CLCNKA-204ENST00000464764 CCDC157Q569K6 752 aa11.32□□□□□ -0.6
CLCNKA-204ENST00000464764 VWA2Q5GFL6 755 aa11.32□□□□□ -0.6
CLCNKA-204ENST00000464764 EEF1A1P5Q5VTE0 462 aa11.32□□□□□ -0.6
CLCNKA-204ENST00000464764 PAPD4Q6PIY7 484 aaKnown RBP11.32□□□□□ -0.6
CLCNKA-204ENST00000464764 TMEM184AQ6ZMB5 413 aa11.32□□□□□ -0.6
CLCNKA-204ENST00000464764 CCDC36Q8IYA8 594 aa11.32□□□□□ -0.6
CLCNKA-204ENST00000464764 HOXB13Q92826 284 aaPredicted RBP11.32□□□□□ -0.6
CLCNKA-204ENST00000464764 PMM1Q92871 262 aa11.32□□□□□ -0.6
CLCNKA-204ENST00000464764 SLC25A44Q96H78 314 aaPredicted RBP11.32□□□□□ -0.6
CLCNKA-204ENST00000464764 CRB3Q9BUF7 120 aa11.32□□□□□ -0.6
CLCNKA-204ENST00000464764 EDEM2Q9BV94 578 aa11.32□□□□□ -0.6
CLCNKA-204ENST00000464764 RTN4RQ9BZR6 473 aa11.32□□□□□ -0.6
CLCNKA-204ENST00000464764 SEMA6CQ9H3T2 930 aa11.32□□□□□ -0.6
CLCNKA-204ENST00000464764 CSAG2Q9Y5P2 127 aa11.32□□□□□ -0.6
CLCNKA-204ENST00000464764 ZNF432O94892 652 aa11.32□□□□□ -0.6
CLCNKA-204ENST00000464764 MELTFP08582 738 aa11.32□□□□□ -0.6
CLCNKA-204ENST00000464764 GDI1P31150 447 aa11.32□□□□□ -0.6
CLCNKA-204ENST00000464764 CD96P40200 585 aa11.32□□□□□ -0.6
CLCNKA-204ENST00000464764 AKR1C3P42330 323 aa11.32□□□□□ -0.6
CLCNKA-204ENST00000464764 PDZK1IP1Q13113 114 aa11.32□□□□□ -0.6
CLCNKA-204ENST00000464764 KIF26BQ2KJY2 2108 aa11.32□□□□□ -0.6
CLCNKA-204ENST00000464764 CHST4Q8NCG5 386 aa11.32□□□□□ -0.6
CLCNKA-204ENST00000464764 OR4D6Q8NGJ1 314 aa11.32□□□□□ -0.6
CLCNKA-204ENST00000464764 SLC25A36Q96CQ1 311 aa11.32□□□□□ -0.6
CLCNKA-204ENST00000464764 FBXO17Q96EF6 278 aa11.32□□□□□ -0.6
CLCNKA-204ENST00000464764 CCDC3Q9BQI4 270 aa11.32□□□□□ -0.6
CLCNKA-204ENST00000464764 HRH4Q9H3N8 390 aa11.32□□□□□ -0.6
CLCNKA-204ENST00000464764 HRASLS2Q9NWW9 162 aa11.32□□□□□ -0.6
CLCNKA-204ENST00000464764 DHCR7Q9UBM7 475 aaKnown RBP11.32□□□□□ -0.6
CLCNKA-204ENST00000464764 FANCMQ8IYD8 2048 aa11.32□□□□□ -0.6
CLCNKA-204ENST00000464764 EIF3GO75821 320 aaKnown RBP eCLIP11.32□□□□□ -0.6
CLCNKA-204ENST00000464764 EGR3Q06889 387 aa11.32□□□□□ -0.6
CLCNKA-204ENST00000464764 TOMM34Q15785 309 aaPredicted RBP11.32□□□□□ -0.6
CLCNKA-204ENST00000464764 ZNF542PQ5EBM4 170 aa11.32□□□□□ -0.6
CLCNKA-204ENST00000464764 CHRDL2Q6WN34 429 aa11.32□□□□□ -0.6
CLCNKA-204ENST00000464764 RBMS3Q6XE24 437 aaKnown RBP11.32□□□□□ -0.6
CLCNKA-204ENST00000464764 ZNF813Q6ZN06 617 aa11.32□□□□□ -0.6
CLCNKA-204ENST00000464764 LYG2Q86SG7 212 aa11.32□□□□□ -0.6
CLCNKA-204ENST00000464764 FJX1Q86VR8 437 aa11.32□□□□□ -0.6
CLCNKA-204ENST00000464764 ZNF584Q8IVC4 421 aa11.32□□□□□ -0.6
CLCNKA-204ENST00000464764 PAQR4Q8N4S7 273 aaPredicted RBP11.32□□□□□ -0.6
CLCNKA-204ENST00000464764 ZNF321PQ8N8H1 164 aa11.32□□□□□ -0.6
CLCNKA-204ENST00000464764 NANPQ8TBE9 248 aa11.32□□□□□ -0.6
CLCNKA-204ENST00000464764 GLYATL2Q8WU03 294 aa11.32□□□□□ -0.6
CLCNKA-204ENST00000464764 DCUN1D4Q92564 292 aa11.32□□□□□ -0.6
CLCNKA-204ENST00000464764 PIK3IP1Q96FE7 263 aa11.32□□□□□ -0.6
CLCNKA-204ENST00000464764 OR8B4Q96RC9 309 aa11.32□□□□□ -0.6
CLCNKA-204ENST00000464764 FN3KRPQ9HA64 309 aa11.32□□□□□ -0.6
CLCNKA-204ENST00000464764 OR2S2Q9NQN1 319 aa11.32□□□□□ -0.6
CLCNKA-204ENST00000464764 WDR87Q6ZQQ6 2873 aa11.31□□□□□ -0.6
CLCNKA-204ENST00000464764 RAB19A4D1S5 217 aa11.31□□□□□ -0.6
CLCNKA-204ENST00000464764 MSGN1A6NI15 193 aa11.31□□□□□ -0.6
CLCNKA-204ENST00000464764 LINC00587B1AMM8 73 aa11.31□□□□□ -0.6
CLCNKA-204ENST00000464764 AGPAT2O15120 278 aa11.31□□□□□ -0.6
CLCNKA-204ENST00000464764 SLC16A7O60669 478 aa11.31□□□□□ -0.6
CLCNKA-204ENST00000464764 TACR3P29371 465 aa11.31□□□□□ -0.6
CLCNKA-204ENST00000464764 PRMT2P55345 433 aa11.31□□□□□ -0.6
CLCNKA-204ENST00000464764 SCAND1P57086 179 aa11.31□□□□□ -0.6
CLCNKA-204ENST00000464764 KLHL26Q53HC5 615 aa11.31□□□□□ -0.6
CLCNKA-204ENST00000464764 NKAPLQ5M9Q1 402 aa11.31□□□□□ -0.6
CLCNKA-204ENST00000464764 DHRS7BQ6IAN0 325 aaPredicted RBP11.31□□□□□ -0.6
CLCNKA-204ENST00000464764 MED25Q71SY5 747 aa11.31□□□□□ -0.6
CLCNKA-204ENST00000464764 SLC16A13Q7RTY0 426 aa11.31□□□□□ -0.6
CLCNKA-204ENST00000464764 SLC25A42Q86VD7 318 aa11.31□□□□□ -0.6
CLCNKA-204ENST00000464764 PRR22Q8IZ63 422 aa11.31□□□□□ -0.6
CLCNKA-204ENST00000464764 FAM160A2Q8N612 972 aaPredicted RBP11.31□□□□□ -0.6
CLCNKA-204ENST00000464764 BAHD1Q8TBE0 780 aaPredicted RBP11.31□□□□□ -0.6
CLCNKA-204ENST00000464764 ZNF296Q8WUU4 475 aaPredicted RBP11.31□□□□□ -0.6
CLCNKA-204ENST00000464764 PHYHIPLQ96FC7 376 aa11.31□□□□□ -0.6
CLCNKA-204ENST00000464764 TOX2Q96NM4 488 aa11.31□□□□□ -0.6
CLCNKA-204ENST00000464764 GAS2L1Q99501 681 aaPredicted RBP11.31□□□□□ -0.6
CLCNKA-204ENST00000464764 SLC19A3Q9BZV2 496 aa11.31□□□□□ -0.6
CLCNKA-204ENST00000464764 BIN3Q9NQY0 253 aa11.31□□□□□ -0.6
CLCNKA-204ENST00000464764 MRPL22Q9NWU5 206 aaKnown RBP11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms