RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 OVOL3O00110 214 aa12.53□□□□□ -0.4
SQSTM1-205ENST00000464493 SGCEO43556 437 aa12.53□□□□□ -0.4
SQSTM1-205ENST00000464493 SNAP29O95721 258 aa12.53□□□□□ -0.4
SQSTM1-205ENST00000464493 GYPBP06028 91 aa12.53□□□□□ -0.4
SQSTM1-205ENST00000464493 OR4A8P0C604 315 aa12.53□□□□□ -0.4
SQSTM1-205ENST00000464493 ZNF823P16415 610 aa12.53□□□□□ -0.4
SQSTM1-205ENST00000464493 SPI1P17947 270 aa12.53□□□□□ -0.4
SQSTM1-205ENST00000464493 PAICSP22234 425 aaKnown RBP12.53□□□□□ -0.4
SQSTM1-205ENST00000464493 CCNOP22674 350 aa12.53□□□□□ -0.4
SQSTM1-205ENST00000464493 GLRXP35754 106 aa12.53□□□□□ -0.4
SQSTM1-205ENST00000464493 GDI2P50395 445 aaKnown RBP12.53□□□□□ -0.4
SQSTM1-205ENST00000464493 PPP2R2BQ00005 443 aa12.53□□□□□ -0.4
SQSTM1-205ENST00000464493 ADIPOQQ15848 244 aa12.53□□□□□ -0.4
SQSTM1-205ENST00000464493 GJC3Q8NFK1 279 aa12.53□□□□□ -0.4
SQSTM1-205ENST00000464493 STMN2Q93045 179 aa12.53□□□□□ -0.4
SQSTM1-205ENST00000464493 PTP4A1Q93096 173 aa12.53□□□□□ -0.4
SQSTM1-205ENST00000464493 PLEKHA8Q96JA3 519 aa12.53□□□□□ -0.4
SQSTM1-205ENST00000464493 POM121L2Q96KW2 1035 aa12.53□□□□□ -0.4
SQSTM1-205ENST00000464493 CIB1Q99828 191 aa12.53□□□□□ -0.4
SQSTM1-205ENST00000464493 CXXC4Q9H2H0 198 aa12.53□□□□□ -0.4
SQSTM1-205ENST00000464493 MED20Q9H944 212 aa12.53□□□□□ -0.4
SQSTM1-205ENST00000464493 MRPL22Q9NWU5 206 aaKnown RBP12.53□□□□□ -0.4
SQSTM1-205ENST00000464493 TVP23BQ9NYZ1 205 aa12.53□□□□□ -0.4
SQSTM1-205ENST00000464493 TMEFF2Q9UIK5 374 aaPredicted RBP12.53□□□□□ -0.4
SQSTM1-205ENST00000464493 LHFPL6Q9Y693 200 aa12.53□□□□□ -0.4
SQSTM1-205ENST00000464493 VPS13CQ709C8 3753 aa12.53□□□□□ -0.4
SQSTM1-205ENST00000464493 USF3Q68DE3 2245 aa12.53□□□□□ -0.4
SQSTM1-205ENST00000464493 TVP23AA6NH52 213 aa12.52□□□□□ -0.41
SQSTM1-205ENST00000464493 ANKRD65E5RJM6 399 aa12.52□□□□□ -0.41
SQSTM1-205ENST00000464493 PRR23D1E9PI22 279 aaPredicted RBP12.52□□□□□ -0.41
SQSTM1-205ENST00000464493 RER1O15258 196 aa12.52□□□□□ -0.41
SQSTM1-205ENST00000464493 DOK2O60496 412 aa12.52□□□□□ -0.41
SQSTM1-205ENST00000464493 BAG2O95816 211 aa12.52□□□□□ -0.41
SQSTM1-205ENST00000464493 PRR23D2P0DMB1 279 aaPredicted RBP12.52□□□□□ -0.41
SQSTM1-205ENST00000464493 COX5BP10606 129 aa12.52□□□□□ -0.41
SQSTM1-205ENST00000464493 CLUP10909 449 aa12.52□□□□□ -0.41
SQSTM1-205ENST00000464493 PAX1P15863 534 aa12.52□□□□□ -0.41
SQSTM1-205ENST00000464493 PCSK6P29122 969 aa12.52□□□□□ -0.41
SQSTM1-205ENST00000464493 FMO3P31513 532 aa12.52□□□□□ -0.41
SQSTM1-205ENST00000464493 RAD52P43351 418 aa12.52□□□□□ -0.41
SQSTM1-205ENST00000464493 BLVRAP53004 296 aa12.52□□□□□ -0.41
SQSTM1-205ENST00000464493 UCP2P55851 309 aa12.52□□□□□ -0.41
SQSTM1-205ENST00000464493 TESK1Q15569 626 aa12.52□□□□□ -0.41
SQSTM1-205ENST00000464493 SNAPC1Q16533 368 aa12.52□□□□□ -0.41
SQSTM1-205ENST00000464493 MST1LQ2TV78 715 aa12.52□□□□□ -0.41
SQSTM1-205ENST00000464493 CCDC92Q53HC0 331 aaPredicted RBP12.52□□□□□ -0.41
SQSTM1-205ENST00000464493 C11orf71Q6IPW1 123 aa12.52□□□□□ -0.41
SQSTM1-205ENST00000464493 CORO6Q6QEF8 472 aa12.52□□□□□ -0.41
SQSTM1-205ENST00000464493 VASH1Q7L8A9 365 aaPredicted RBP12.52□□□□□ -0.41
SQSTM1-205ENST00000464493 LRRC75A-AS1Q8N1F1 130 aa12.52□□□□□ -0.41
SQSTM1-205ENST00000464493 PQLC1Q8N2U9 271 aa12.52□□□□□ -0.41
SQSTM1-205ENST00000464493 OR2AJ1Q8NGZ0 328 aa12.52□□□□□ -0.41
SQSTM1-205ENST00000464493 HCAR1Q9BXC0 346 aa12.52□□□□□ -0.41
SQSTM1-205ENST00000464493 GSX2Q9BZM3 304 aa12.52□□□□□ -0.41
SQSTM1-205ENST00000464493 ZNF701Q9NV72 531 aaPredicted RBP12.52□□□□□ -0.41
SQSTM1-205ENST00000464493 PLEK2Q9NYT0 353 aa12.52□□□□□ -0.41
SQSTM1-205ENST00000464493 EIF3KQ9UBQ5 218 aaKnown RBP12.52□□□□□ -0.41
SQSTM1-205ENST00000464493 CYB5R1Q9UHQ9 305 aa12.52□□□□□ -0.41
SQSTM1-205ENST00000464493 KCNG2Q9UJ96 466 aa12.52□□□□□ -0.41
SQSTM1-205ENST00000464493 NDRG4Q9ULP0 352 aaKnown RBP12.52□□□□□ -0.41
SQSTM1-205ENST00000464493 CMAHPQ9Y471 501 aa12.52□□□□□ -0.41
SQSTM1-205ENST00000464493 PRRC2AP48634 2157 aaKnown RBP12.52□□□□□ -0.41
SQSTM1-205ENST00000464493 ZAR1LA6NP61 321 aa12.51□□□□□ -0.41
SQSTM1-205ENST00000464493 B9A039 149 aa12.51□□□□□ -0.41
SQSTM1-205ENST00000464493 SYNGR3O43761 229 aa12.51□□□□□ -0.41
SQSTM1-205ENST00000464493 GPRIN2O60269 458 aa12.51□□□□□ -0.41
SQSTM1-205ENST00000464493 FAM157BP0CG42 384 aa12.51□□□□□ -0.41
SQSTM1-205ENST00000464493 BMP4P12644 408 aa12.51□□□□□ -0.41
SQSTM1-205ENST00000464493 EPHA2P29317 976 aa12.51□□□□□ -0.41
SQSTM1-205ENST00000464493 GGT2P36268 569 aa12.51□□□□□ -0.41
SQSTM1-205ENST00000464493 CDKN1AP38936 164 aa12.51□□□□□ -0.41
SQSTM1-205ENST00000464493 HTR5AP47898 357 aa12.51□□□□□ -0.41
SQSTM1-205ENST00000464493 PTH2RP49190 550 aa12.51□□□□□ -0.41
SQSTM1-205ENST00000464493 RPS23P62266 143 aaKnown RBP12.51□□□□□ -0.41
SQSTM1-205ENST00000464493 HIST1H3AP68431 136 aa12.51□□□□□ -0.41
SQSTM1-205ENST00000464493 ADAM8P78325 824 aa12.51□□□□□ -0.41
SQSTM1-205ENST00000464493 EFNB3Q15768 340 aa12.51□□□□□ -0.41
SQSTM1-205ENST00000464493 SWI5Q1ZZU3 235 aa12.51□□□□□ -0.41
SQSTM1-205ENST00000464493 HIST2H3PS2Q5TEC6 136 aa12.51□□□□□ -0.41
SQSTM1-205ENST00000464493 SLC18B1Q6NT16 456 aa12.51□□□□□ -0.41
SQSTM1-205ENST00000464493 PLBD1Q6P4A8 553 aa12.51□□□□□ -0.41
SQSTM1-205ENST00000464493 HIST2H3AQ71DI3 136 aa12.51□□□□□ -0.41
SQSTM1-205ENST00000464493 CPOQ8IVL8 374 aa12.51□□□□□ -0.41
SQSTM1-205ENST00000464493 LINC00346Q8IVM7 164 aa12.51□□□□□ -0.41
SQSTM1-205ENST00000464493 ZNF511Q8NB15 262 aa12.51□□□□□ -0.41
SQSTM1-205ENST00000464493 OR6K6Q8NGW6 343 aa12.51□□□□□ -0.41
SQSTM1-205ENST00000464493 OR1F12Q8NHA8 337 aa12.51□□□□□ -0.41
SQSTM1-205ENST00000464493 TRMT61AQ96FX7 289 aaKnown RBP12.51□□□□□ -0.41
SQSTM1-205ENST00000464493 PERPQ96FX8 193 aa12.51□□□□□ -0.41
SQSTM1-205ENST00000464493 CACNG6Q9BXT2 260 aa12.51□□□□□ -0.41
SQSTM1-205ENST00000464493 PRRG3Q9BZD7 231 aa12.51□□□□□ -0.41
SQSTM1-205ENST00000464493 BCL2L14Q9BZR8 327 aa12.51□□□□□ -0.41
SQSTM1-205ENST00000464493 OR51V1Q9H2C8 321 aa12.51□□□□□ -0.41
SQSTM1-205ENST00000464493 OR51B6Q9H340 312 aa12.51□□□□□ -0.41
SQSTM1-205ENST00000464493 PLK3Q9H4B4 646 aa12.51□□□□□ -0.41
SQSTM1-205ENST00000464493 PMF1-BGLAPU3KQ54 211 aa12.51□□□□□ -0.41
SQSTM1-205ENST00000464493 OR6C6A6NF89 314 aa12.5□□□□□ -0.41
SQSTM1-205ENST00000464493 ZNF593O00488 134 aaPredicted RBP12.5□□□□□ -0.41
SQSTM1-205ENST00000464493 EI24O14681 340 aa12.5□□□□□ -0.41
SQSTM1-205ENST00000464493 GLCEO94923 617 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms