RNA–Protein interactions for RNA: ENST00000464168.5

USP4-208, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 4

Gene USP4, Length 601 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-208ENST00000464168 FXYD1O00168 92 aa19.04■□□□□ 0.64
USP4-208ENST00000464168 ABHD16AO95870 558 aa19.04■□□□□ 0.64
USP4-208ENST00000464168 IFI30P13284 250 aa19.04■□□□□ 0.64
USP4-208ENST00000464168 MSR1P21757 451 aa19.04■□□□□ 0.64
USP4-208ENST00000464168 FUT4P22083 530 aa19.04■□□□□ 0.64
USP4-208ENST00000464168 ZMYND11Q15326 602 aa19.04■□□□□ 0.64
USP4-208ENST00000464168 FAM205BPQ63HN1 556 aa19.04■□□□□ 0.64
USP4-208ENST00000464168 OR2Z1Q8NG97 314 aa19.04■□□□□ 0.64
USP4-208ENST00000464168 OR8J3Q8NGG0 315 aa19.04■□□□□ 0.64
USP4-208ENST00000464168 ZNF48Q96MX3 618 aaPredicted RBP19.04■□□□□ 0.64
USP4-208ENST00000464168 ZNF583Q96ND8 569 aa19.04■□□□□ 0.64
USP4-208ENST00000464168 SIGLEC11Q96RL6 698 aa19.04■□□□□ 0.64
USP4-208ENST00000464168 POLE4Q9NR33 117 aa19.04■□□□□ 0.64
USP4-208ENST00000464168 MAN2C1Q9NTJ4 1040 aa19.04■□□□□ 0.64
USP4-208ENST00000464168 INTS9Q9NV88 658 aaKnown RBP19.04■□□□□ 0.64
USP4-208ENST00000464168 TBCCD1Q9NVR7 557 aa19.04■□□□□ 0.64
USP4-208ENST00000464168 A4GNTQ9UNA3 340 aa19.04■□□□□ 0.64
USP4-208ENST00000464168 HTR3EA5X5Y0 456 aa19.03■□□□□ 0.64
USP4-208ENST00000464168 IFNA14P01570 189 aa19.03■□□□□ 0.64
USP4-208ENST00000464168 GSTM3P21266 225 aa19.03■□□□□ 0.64
USP4-208ENST00000464168 BTG1P62324 171 aa19.03■□□□□ 0.64
USP4-208ENST00000464168 ST3GAL3Q11203 375 aa19.03■□□□□ 0.64
USP4-208ENST00000464168 CYBRD1Q53TN4 286 aa19.03■□□□□ 0.64
USP4-208ENST00000464168 METTL21CQ5VZV1 264 aa19.03■□□□□ 0.64
USP4-208ENST00000464168 C10orf82Q8WW14 230 aa19.03■□□□□ 0.64
USP4-208ENST00000464168 EMC7Q9NPA0 242 aa19.03■□□□□ 0.64
USP4-208ENST00000464168 NDRG4Q9ULP0 352 aaKnown RBP19.03■□□□□ 0.64
USP4-208ENST00000464168 TRAV27A0A087WT01 109 aa19.02■□□□□ 0.64
USP4-208ENST00000464168 A6NIZ1 184 aa19.02■□□□□ 0.64
USP4-208ENST00000464168 A8MXK9 166 aa19.02■□□□□ 0.64
USP4-208ENST00000464168 F5H0A9 414 aaPredicted RBP19.02■□□□□ 0.64
USP4-208ENST00000464168 COX5BP10606 129 aa19.02■□□□□ 0.64
USP4-208ENST00000464168 TNFRSF1AP19438 455 aa19.02■□□□□ 0.64
USP4-208ENST00000464168 KITLGP21583 273 aa19.02■□□□□ 0.64
USP4-208ENST00000464168 TUBG1P23258 451 aa19.02■□□□□ 0.64
USP4-208ENST00000464168 TNFSF4P23510 183 aa19.02■□□□□ 0.64
USP4-208ENST00000464168 RAP1BP61224 184 aa19.02■□□□□ 0.64
USP4-208ENST00000464168 RAP1AP62834 184 aa19.02■□□□□ 0.64
USP4-208ENST00000464168 BAMBIQ13145 260 aa19.02■□□□□ 0.64
USP4-208ENST00000464168 ERICH5Q6P6B1 374 aa19.02■□□□□ 0.64
USP4-208ENST00000464168 MICU2Q8IYU8 434 aa19.02■□□□□ 0.64
USP4-208ENST00000464168 NPEPL1Q8NDH3 523 aa19.02■□□□□ 0.64
USP4-208ENST00000464168 OR51A7Q8NH64 312 aa19.02■□□□□ 0.64
USP4-208ENST00000464168 CMBLQ96DG6 245 aa19.02■□□□□ 0.64
USP4-208ENST00000464168 MAGEB18Q96M61 343 aa19.02■□□□□ 0.64
USP4-208ENST00000464168 ZMAT3Q9HA38 289 aaKnown RBP19.02■□□□□ 0.64
USP4-208ENST00000464168 TUBG2Q9NRH3 451 aa19.02■□□□□ 0.64
USP4-208ENST00000464168 PPP1R3CQ9UQK1 317 aa19.02■□□□□ 0.64
USP4-208ENST00000464168 STARD10Q9Y365 291 aa19.02■□□□□ 0.64
USP4-208ENST00000464168 A0A0G2JND7 137 aa19.01■□□□□ 0.63
USP4-208ENST00000464168 KDELR2P33947 212 aa19.01■□□□□ 0.63
USP4-208ENST00000464168 NRMQ8IXM6 262 aa19.01■□□□□ 0.63
USP4-208ENST00000464168 ITLN1Q8WWA0 313 aa19.01■□□□□ 0.63
USP4-208ENST00000464168 HAVCR1Q96D42 359 aa19.01■□□□□ 0.63
USP4-208ENST00000464168 PRRC1Q96M27 445 aa19.01■□□□□ 0.63
USP4-208ENST00000464168 WACQ9BTA9 647 aa19.01■□□□□ 0.63
USP4-208ENST00000464168 MRI1Q9BV20 369 aa19.01■□□□□ 0.63
USP4-208ENST00000464168 IL19Q9UHD0 177 aa19.01■□□□□ 0.63
USP4-208ENST00000464168 H7C1C5 153 aa19■□□□□ 0.63
USP4-208ENST00000464168 EDF1O60869 148 aaKnown RBP19■□□□□ 0.63
USP4-208ENST00000464168 RNASE1P07998 156 aaKnown RBP19■□□□□ 0.63
USP4-208ENST00000464168 CD80P33681 288 aa19■□□□□ 0.63
USP4-208ENST00000464168 HTR5AP47898 357 aa19■□□□□ 0.63
USP4-208ENST00000464168 LCN6P62502 163 aa19■□□□□ 0.63
USP4-208ENST00000464168 PAX8Q06710 450 aa19■□□□□ 0.63
USP4-208ENST00000464168 LRRC23Q53EV4 343 aaPredicted RBP19■□□□□ 0.63
USP4-208ENST00000464168 OAFQ86UD1 273 aa19■□□□□ 0.63
USP4-208ENST00000464168 TPD52L3Q96J77 140 aa19■□□□□ 0.63
USP4-208ENST00000464168 UNKLQ9H9P5 680 aaKnown RBP19■□□□□ 0.63
USP4-208ENST00000464168 VWFP04275 2813 aa19■□□□□ 0.63
USP4-208ENST00000464168 TMEM178BH3BS89 294 aa18.99■□□□□ 0.63
USP4-208ENST00000464168 SGCEO43556 437 aa18.99■□□□□ 0.63
USP4-208ENST00000464168 DOK2O60496 412 aa18.99■□□□□ 0.63
USP4-208ENST00000464168 NPPAP01160 153 aa18.99■□□□□ 0.63
USP4-208ENST00000464168 MDH2P40926 338 aaKnown RBP18.99■□□□□ 0.63
USP4-208ENST00000464168 ERFP50548 548 aa18.99■□□□□ 0.63
USP4-208ENST00000464168 PRKCDQ05655 676 aa18.99■□□□□ 0.63
USP4-208ENST00000464168 ESCO2Q56NI9 601 aa18.99■□□□□ 0.63
USP4-208ENST00000464168 VASH1Q7L8A9 365 aaPredicted RBP18.99■□□□□ 0.63
USP4-208ENST00000464168 OR2V2Q96R30 315 aa18.99■□□□□ 0.63
USP4-208ENST00000464168 RHCGQ9UBD6 479 aa18.99■□□□□ 0.63
USP4-208ENST00000464168 SNX13Q9Y5W8 968 aa18.99■□□□□ 0.63
USP4-208ENST00000464168 CEACAM18A8MTB9 384 aa18.98■□□□□ 0.63
USP4-208ENST00000464168 EFCAB9A8MZ26 197 aa18.98■□□□□ 0.63
USP4-208ENST00000464168 CLDN34H7C241 214 aa18.98■□□□□ 0.63
USP4-208ENST00000464168 SURF4O15260 269 aa18.98■□□□□ 0.63
USP4-208ENST00000464168 WNT2P09544 360 aa18.98■□□□□ 0.63
USP4-208ENST00000464168 YAP1P46937 504 aaKnown RBP18.98■□□□□ 0.63
USP4-208ENST00000464168 SELENOWP63302 87 aa18.98■□□□□ 0.63
USP4-208ENST00000464168 PAX2Q02962 417 aa18.98■□□□□ 0.63
USP4-208ENST00000464168 SCRN3Q0VDG4 424 aa18.98■□□□□ 0.63
USP4-208ENST00000464168 SLC9A3R2Q15599 337 aa18.98■□□□□ 0.63
USP4-208ENST00000464168 ANKDD1AQ495B1 522 aa18.98■□□□□ 0.63
USP4-208ENST00000464168 COQ5Q5HYK3 327 aa18.98■□□□□ 0.63
USP4-208ENST00000464168 OR13C2Q8NGS9 318 aa18.98■□□□□ 0.63
USP4-208ENST00000464168 SLC7A6Q92536 515 aa18.98■□□□□ 0.63
USP4-208ENST00000464168 TAF15Q92804 592 aaKnown RBP eCLIP18.98■□□□□ 0.63
USP4-208ENST00000464168 PTP4A1Q93096 173 aa18.98■□□□□ 0.63
USP4-208ENST00000464168 SLC25A28Q96A46 364 aa18.98■□□□□ 0.63
USP4-208ENST00000464168 SIKE1Q9BRV8 207 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms