RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 GCM1Q9NP62 436 aa12.1□□□□□ -0.47
SMC1A-204ENST00000463684 SLAMF8Q9P0V8 285 aa12.1□□□□□ -0.47
SMC1A-204ENST00000463684 KIF17Q9P2E2 1029 aa12.1□□□□□ -0.47
SMC1A-204ENST00000463684 ASH2LQ9UBL3 628 aa12.1□□□□□ -0.47
SMC1A-204ENST00000463684 CLPXO76031 633 aa12.09□□□□□ -0.47
SMC1A-204ENST00000463684 ZNF205O95201 554 aa12.09□□□□□ -0.47
SMC1A-204ENST00000463684 LYPD3O95274 346 aa12.09□□□□□ -0.47
SMC1A-204ENST00000463684 THY1P04216 161 aa12.09□□□□□ -0.47
SMC1A-204ENST00000463684 CST2P09228 141 aa12.09□□□□□ -0.47
SMC1A-204ENST00000463684 FUT1P19526 365 aa12.09□□□□□ -0.47
SMC1A-204ENST00000463684 KITLGP21583 273 aa12.09□□□□□ -0.47
SMC1A-204ENST00000463684 LAP3P28838 519 aa12.09□□□□□ -0.47
SMC1A-204ENST00000463684 STX1BP61266 288 aa12.09□□□□□ -0.47
SMC1A-204ENST00000463684 FGF12P61328 243 aa12.09□□□□□ -0.47
SMC1A-204ENST00000463684 FMODQ06828 376 aa12.09□□□□□ -0.47
SMC1A-204ENST00000463684 NPTX1Q15818 432 aa12.09□□□□□ -0.47
SMC1A-204ENST00000463684 DUSP7Q16829 419 aa12.09□□□□□ -0.47
SMC1A-204ENST00000463684 MSRB3Q8IXL7 192 aa12.09□□□□□ -0.47
SMC1A-204ENST00000463684 ATG16L2Q8NAA4 619 aa12.09□□□□□ -0.47
SMC1A-204ENST00000463684 OR8B3Q8NGG8 313 aa12.09□□□□□ -0.47
SMC1A-204ENST00000463684 LINC01006Q8NI28 216 aa12.09□□□□□ -0.47
SMC1A-204ENST00000463684 SSMEM1Q8WWF3 244 aa12.09□□□□□ -0.47
SMC1A-204ENST00000463684 DYRK2Q92630 601 aa12.09□□□□□ -0.47
SMC1A-204ENST00000463684 RBP7Q96R05 134 aa12.09□□□□□ -0.47
SMC1A-204ENST00000463684 OR8B2Q96RD0 313 aa12.09□□□□□ -0.47
SMC1A-204ENST00000463684 OR52B2Q96RD2 323 aa12.09□□□□□ -0.47
SMC1A-204ENST00000463684 TBCCD1Q9NVR7 557 aa12.09□□□□□ -0.47
SMC1A-204ENST00000463684 NDRG4Q9ULP0 352 aaKnown RBP12.09□□□□□ -0.47
SMC1A-204ENST00000463684 TANC2Q9HCD6 1990 aa12.09□□□□□ -0.47
SMC1A-204ENST00000463684 IGKV1D-43A0A0B4J1Z2 117 aa12.08□□□□□ -0.48
SMC1A-204ENST00000463684 SNNO75324 88 aaPredicted RBP12.08□□□□□ -0.48
SMC1A-204ENST00000463684 TSPAN15O95858 294 aa12.08□□□□□ -0.48
SMC1A-204ENST00000463684 MELTFP08582 738 aa12.08□□□□□ -0.48
SMC1A-204ENST00000463684 GPX2P18283 190 aa12.08□□□□□ -0.48
SMC1A-204ENST00000463684 AQP2P41181 271 aa12.08□□□□□ -0.48
SMC1A-204ENST00000463684 PITPNBP48739 271 aa12.08□□□□□ -0.48
SMC1A-204ENST00000463684 MMP16P51512 607 aa12.08□□□□□ -0.48
SMC1A-204ENST00000463684 RUNDC3AQ59EK9 446 aa12.08□□□□□ -0.48
SMC1A-204ENST00000463684 ARMC4Q5T2S8 1044 aa12.08□□□□□ -0.48
SMC1A-204ENST00000463684 SLC25A47Q6Q0C1 308 aa12.08□□□□□ -0.48
SMC1A-204ENST00000463684 PTOV1Q86YD1 416 aa12.08□□□□□ -0.48
SMC1A-204ENST00000463684 RBM45Q8IUH3 476 aaKnown RBP12.08□□□□□ -0.48
SMC1A-204ENST00000463684 FITM2Q8N6M3 262 aa12.08□□□□□ -0.48
SMC1A-204ENST00000463684 HDAC2Q92769 488 aaKnown RBP12.08□□□□□ -0.48
SMC1A-204ENST00000463684 DACT3Q96B18 629 aaPredicted RBP12.08□□□□□ -0.48
SMC1A-204ENST00000463684 HAVCR1Q96D42 359 aa12.08□□□□□ -0.48
SMC1A-204ENST00000463684 COG8Q96MW5 612 aa12.08□□□□□ -0.48
SMC1A-204ENST00000463684 TMEM246Q9BRR3 403 aa12.08□□□□□ -0.48
SMC1A-204ENST00000463684 ZNF426Q9BUY5 554 aa12.08□□□□□ -0.48
SMC1A-204ENST00000463684 CENPHQ9H3R5 247 aa12.08□□□□□ -0.48
SMC1A-204ENST00000463684 MEPEQ9NQ76 525 aaPredicted RBP12.08□□□□□ -0.48
SMC1A-204ENST00000463684 VAPAQ9P0L0 249 aa12.08□□□□□ -0.48
SMC1A-204ENST00000463684 CLN8Q9UBY8 286 aa12.08□□□□□ -0.48
SMC1A-204ENST00000463684 GMEB1Q9Y692 573 aa12.08□□□□□ -0.48
SMC1A-204ENST00000463684 LRRC30A6NM36 301 aa12.07□□□□□ -0.48
SMC1A-204ENST00000463684 C12orf71A8MTZ7 269 aa12.07□□□□□ -0.48
SMC1A-204ENST00000463684 M0QX08 132 aa12.07□□□□□ -0.48
SMC1A-204ENST00000463684 OR7A10O76100 309 aa12.07□□□□□ -0.48
SMC1A-204ENST00000463684 CYB5R3P00387 301 aaPredicted RBP12.07□□□□□ -0.48
SMC1A-204ENST00000463684 MT-ND1P03886 318 aa12.07□□□□□ -0.48
SMC1A-204ENST00000463684 OPN1SWP03999 348 aa12.07□□□□□ -0.48
SMC1A-204ENST00000463684 THRBP10828 461 aa12.07□□□□□ -0.48
SMC1A-204ENST00000463684 CD247P20963 164 aa12.07□□□□□ -0.48
SMC1A-204ENST00000463684 VSNL1P62760 191 aa12.07□□□□□ -0.48
SMC1A-204ENST00000463684 GUCY1A3Q02108 690 aa12.07□□□□□ -0.48
SMC1A-204ENST00000463684 C2orf68Q2NKX9 166 aa12.07□□□□□ -0.48
SMC1A-204ENST00000463684 VASH1Q7L8A9 365 aaPredicted RBP12.07□□□□□ -0.48
SMC1A-204ENST00000463684 SYT9Q86SS6 491 aa12.07□□□□□ -0.48
SMC1A-204ENST00000463684 ANKRD42Q8N9B4 389 aa12.07□□□□□ -0.48
SMC1A-204ENST00000463684 GPR32P1Q8NGA4 272 aa12.07□□□□□ -0.48
SMC1A-204ENST00000463684 ZNF420Q8TAQ5 688 aaPredicted RBP12.07□□□□□ -0.48
SMC1A-204ENST00000463684 FNDC8Q8TC99 324 aa12.07□□□□□ -0.48
SMC1A-204ENST00000463684 PTP4A1Q93096 173 aa12.07□□□□□ -0.48
SMC1A-204ENST00000463684 NMD3Q96D46 503 aaKnown RBP12.07□□□□□ -0.48
SMC1A-204ENST00000463684 PCGF1Q9BSM1 259 aa12.07□□□□□ -0.48
SMC1A-204ENST00000463684 POFUT1Q9H488 388 aa12.07□□□□□ -0.48
SMC1A-204ENST00000463684 STARD10Q9Y365 291 aa12.07□□□□□ -0.48
SMC1A-204ENST00000463684 A0A1W2PPL8 197 aa12.06□□□□□ -0.48
SMC1A-204ENST00000463684 TNFRSF13BO14836 293 aaPredicted RBP12.06□□□□□ -0.48
SMC1A-204ENST00000463684 ENSAO43768 121 aaKnown RBP12.06□□□□□ -0.48
SMC1A-204ENST00000463684 COX5BP10606 129 aa12.06□□□□□ -0.48
SMC1A-204ENST00000463684 SRP9P49458 86 aaKnown RBP12.06□□□□□ -0.48
SMC1A-204ENST00000463684 PROK1P58294 105 aa12.06□□□□□ -0.48
SMC1A-204ENST00000463684 LAPTM4AQ15012 233 aa12.06□□□□□ -0.48
SMC1A-204ENST00000463684 ZNF404Q494X3 552 aa12.06□□□□□ -0.48
SMC1A-204ENST00000463684 PAGE3Q5JUK9 113 aa12.06□□□□□ -0.48
SMC1A-204ENST00000463684 RUSC1-AS1Q66K80 236 aa12.06□□□□□ -0.48
SMC1A-204ENST00000463684 BLOC1S3Q6QNY0 202 aa12.06□□□□□ -0.48
SMC1A-204ENST00000463684 SLC30A8Q8IWU4 369 aa12.06□□□□□ -0.48
SMC1A-204ENST00000463684 C1orf87Q8N0U7 546 aa12.06□□□□□ -0.48
SMC1A-204ENST00000463684 C11orf65Q8NCR3 313 aa12.06□□□□□ -0.48
SMC1A-204ENST00000463684 MOSPD2Q8NHP6 518 aa12.06□□□□□ -0.48
SMC1A-204ENST00000463684 SLC26A7Q8TE54 656 aa12.06□□□□□ -0.48
SMC1A-204ENST00000463684 GATAD2BQ8WXI9 593 aa12.06□□□□□ -0.48
SMC1A-204ENST00000463684 SPDL1Q96EA4 605 aa12.06□□□□□ -0.48
SMC1A-204ENST00000463684 SGTBQ96EQ0 304 aa12.06□□□□□ -0.48
SMC1A-204ENST00000463684 ALG12Q9BV10 488 aa12.06□□□□□ -0.48
SMC1A-204ENST00000463684 TXNIPQ9H3M7 391 aa12.06□□□□□ -0.48
SMC1A-204ENST00000463684 IKZF5Q9H5V7 419 aa12.06□□□□□ -0.48
SMC1A-204ENST00000463684 NPIPB13A6NJU9 1138 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms