RNA–Protein interactions for RNA: ENST00000462815.5

PTPN7-204, Transcript of protein tyrosine phosphatase, non-receptor type 7, human

TSL 2

Gene PTPN7, Length 1,147 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN7-204	ENST00000462815	CD80	P33681	288 aa		9.37	□□□□□ -0.91
PTPN7-204	ENST00000462815	BTG1	P62324	171 aa		9.37	□□□□□ -0.91
PTPN7-204	ENST00000462815	TNFAIP6	P98066	277 aa	Predicted RBP	9.37	□□□□□ -0.91
PTPN7-204	ENST00000462815	PIN1	Q13526	163 aa	Predicted RBP	9.37	□□□□□ -0.91
PTPN7-204	ENST00000462815	SGCA	Q16586	387 aa		9.37	□□□□□ -0.91
PTPN7-204	ENST00000462815	ARMCX4	Q5H9R4	360 aa		9.37	□□□□□ -0.91
PTPN7-204	ENST00000462815	MTX3	Q5HYI7	312 aa		9.37	□□□□□ -0.91
PTPN7-204	ENST00000462815	TREML4	Q6UXN2	200 aa		9.37	□□□□□ -0.91
PTPN7-204	ENST00000462815	BCAS4	Q8TDM0	211 aa		9.37	□□□□□ -0.91
PTPN7-204	ENST00000462815	ST7L	Q8TDW4	575 aa		9.37	□□□□□ -0.91
PTPN7-204	ENST00000462815	C4orf45	Q96LM5	186 aa		9.37	□□□□□ -0.91
PTPN7-204	ENST00000462815	SAMD8	Q96LT4	415 aa		9.37	□□□□□ -0.91
PTPN7-204	ENST00000462815	POLR2J2	Q9GZM3	115 aa	Known RBP	9.37	□□□□□ -0.91
PTPN7-204	ENST00000462815	POLR2J3	Q9H1A7	115 aa	Known RBP	9.37	□□□□□ -0.91
PTPN7-204	ENST00000462815	STX18	Q9P2W9	335 aa	Known RBP	9.37	□□□□□ -0.91
PTPN7-204	ENST00000462815	EIF3K	Q9UBQ5	218 aa	Known RBP	9.37	□□□□□ -0.91
PTPN7-204	ENST00000462815	RIMS3	Q9UJD0	308 aa		9.37	□□□□□ -0.91
PTPN7-204	ENST00000462815	NDUFAF1	Q9Y375	327 aa		9.37	□□□□□ -0.91
PTPN7-204	ENST00000462815	AUP1	Q9Y679	476 aa		9.37	□□□□□ -0.91
PTPN7-204	ENST00000462815	SBK2	P0C263	348 aa		9.36	□□□□□ -0.91
PTPN7-204	ENST00000462815	PPIAL4G	P0DN37	164 aa		9.36	□□□□□ -0.91
PTPN7-204	ENST00000462815	COX5B	P10606	129 aa		9.36	□□□□□ -0.91
PTPN7-204	ENST00000462815	ZNF26	P17031	533 aa	Predicted RBP	9.36	□□□□□ -0.91
PTPN7-204	ENST00000462815	RPL27	P61353	136 aa	Known RBP	9.36	□□□□□ -0.91
PTPN7-204	ENST00000462815	CD47	Q08722	323 aa		9.36	□□□□□ -0.91
PTPN7-204	ENST00000462815	BAMBI	Q13145	260 aa		9.36	□□□□□ -0.91
PTPN7-204	ENST00000462815	TAF11	Q15544	211 aa		9.36	□□□□□ -0.91
PTPN7-204	ENST00000462815	OCLN	Q16625	522 aa		9.36	□□□□□ -0.91
PTPN7-204	ENST00000462815	ALG10	Q5BKT4	473 aa		9.36	□□□□□ -0.91
PTPN7-204	ENST00000462815	ZMAT1	Q5H9K5	638 aa		9.36	□□□□□ -0.91
PTPN7-204	ENST00000462815	LEG1	Q6P5S2	330 aa		9.36	□□□□□ -0.91
PTPN7-204	ENST00000462815	SYT9	Q86SS6	491 aa		9.36	□□□□□ -0.91
PTPN7-204	ENST00000462815	SPIC	Q8N5J4	248 aa		9.36	□□□□□ -0.91
PTPN7-204	ENST00000462815	TSPEAR	Q8WU66	669 aa		9.36	□□□□□ -0.91
PTPN7-204	ENST00000462815	ITLN1	Q8WWA0	313 aa		9.36	□□□□□ -0.91
PTPN7-204	ENST00000462815	RASSF5	Q8WWW0	418 aa		9.36	□□□□□ -0.91
PTPN7-204	ENST00000462815	DCLRE1C	Q96SD1	692 aa	Known RBP	9.36	□□□□□ -0.91
PTPN7-204	ENST00000462815	GPA33	Q99795	319 aa		9.36	□□□□□ -0.91
PTPN7-204	ENST00000462815	SLITRK2	Q9H156	845 aa		9.36	□□□□□ -0.91
PTPN7-204	ENST00000462815	KCNN2	Q9H2S1	579 aa		9.36	□□□□□ -0.91
PTPN7-204	ENST00000462815	PRDM13	Q9H4Q3	707 aa		9.36	□□□□□ -0.91
PTPN7-204	ENST00000462815	POLE4	Q9NR33	117 aa		9.36	□□□□□ -0.91
PTPN7-204	ENST00000462815	MAN2C1	Q9NTJ4	1040 aa		9.36	□□□□□ -0.91
PTPN7-204	ENST00000462815	TBCCD1	Q9NVR7	557 aa		9.36	□□□□□ -0.91
PTPN7-204	ENST00000462815	A4GNT	Q9UNA3	340 aa		9.36	□□□□□ -0.91
PTPN7-204	ENST00000462815	SH3GLB1	Q9Y371	365 aa		9.36	□□□□□ -0.91
PTPN7-204	ENST00000462815	TIMM10B	Q9Y5J6	103 aa		9.36	□□□□□ -0.91
PTPN7-204	ENST00000462815	MDFIC2	A0A1B0GVS7	189 aa		9.35	□□□□□ -0.91
PTPN7-204	ENST00000462815	POM121C	A8CG34	1229 aa		9.35	□□□□□ -0.91
PTPN7-204	ENST00000462815	CEACAM18	A8MTB9	384 aa		9.35	□□□□□ -0.91
PTPN7-204	ENST00000462815	TMEM178B	H3BS89	294 aa		9.35	□□□□□ -0.91
PTPN7-204	ENST00000462815	NDUFAB1	O14561	156 aa		9.35	□□□□□ -0.91
PTPN7-204	ENST00000462815	WNT2	P09544	360 aa		9.35	□□□□□ -0.91
PTPN7-204	ENST00000462815	THRB	P10828	461 aa		9.35	□□□□□ -0.91
PTPN7-204	ENST00000462815	MDK	P21741	143 aa	Predicted RBP	9.35	□□□□□ -0.91
PTPN7-204	ENST00000462815	OR1E2	P47887	323 aa		9.35	□□□□□ -0.91
PTPN7-204	ENST00000462815	MMP16	P51512	607 aa		9.35	□□□□□ -0.91
PTPN7-204	ENST00000462815	TAS2R41	P59536	307 aa		9.35	□□□□□ -0.91
PTPN7-204	ENST00000462815	IL13RA1	P78552	427 aa		9.35	□□□□□ -0.91
PTPN7-204	ENST00000462815	TOP3A	Q13472	1001 aa	Predicted RBP	9.35	□□□□□ -0.91
PTPN7-204	ENST00000462815	NFYC	Q13952	458 aa		9.35	□□□□□ -0.91
PTPN7-204	ENST00000462815	RABL3	Q5HYI8	236 aa		9.35	□□□□□ -0.91
PTPN7-204	ENST00000462815	INTS11	Q5TA45	600 aa	Known RBP	9.35	□□□□□ -0.91
PTPN7-204	ENST00000462815	NANOGP8	Q6NSW7	305 aa		9.35	□□□□□ -0.91
PTPN7-204	ENST00000462815	UNQ6126/PRO20091	Q6UXV3	157 aa		9.35	□□□□□ -0.91
PTPN7-204	ENST00000462815	IGFN1	Q86VF2	1251 aa		9.35	□□□□□ -0.91
PTPN7-204	ENST00000462815	FAM156A	Q8NDB6	213 aa		9.35	□□□□□ -0.91
PTPN7-204	ENST00000462815	UPRT	Q96BW1	309 aa		9.35	□□□□□ -0.91
PTPN7-204	ENST00000462815	ZNF583	Q96ND8	569 aa		9.35	□□□□□ -0.91
PTPN7-204	ENST00000462815	ELOVL3	Q9HB03	270 aa		9.35	□□□□□ -0.91
PTPN7-204	ENST00000462815	GCM1	Q9NP62	436 aa		9.35	□□□□□ -0.91
PTPN7-204	ENST00000462815	ZKSCAN7	Q9P0L1	754 aa	Predicted RBP	9.35	□□□□□ -0.91
PTPN7-204	ENST00000462815	IL19	Q9UHD0	177 aa		9.35	□□□□□ -0.91
PTPN7-204	ENST00000462815	ARL2BP	Q9Y2Y0	163 aa		9.35	□□□□□ -0.91
PTPN7-204	ENST00000462815	STARD10	Q9Y365	291 aa		9.35	□□□□□ -0.91
PTPN7-204	ENST00000462815	MED31	Q9Y3C7	131 aa		9.35	□□□□□ -0.91
PTPN7-204	ENST00000462815	MMP24	Q9Y5R2	645 aa		9.35	□□□□□ -0.91
PTPN7-204	ENST00000462815		A0A1B0GWJ7	208 aa		9.34	□□□□□ -0.91
PTPN7-204	ENST00000462815	OR6C6	A6NF89	314 aa		9.34	□□□□□ -0.91
PTPN7-204	ENST00000462815	ANGPT2	O15123	496 aa		9.34	□□□□□ -0.91
PTPN7-204	ENST00000462815	TIMM8A	O60220	97 aa	Predicted RBP	9.34	□□□□□ -0.91
PTPN7-204	ENST00000462815	ABHD16A	O95870	558 aa		9.34	□□□□□ -0.91
PTPN7-204	ENST00000462815	NR2C1	P13056	603 aa		9.34	□□□□□ -0.91
PTPN7-204	ENST00000462815	MSR1	P21757	451 aa		9.34	□□□□□ -0.91
PTPN7-204	ENST00000462815	ARHGDIA	P52565	204 aa		9.34	□□□□□ -0.91
PTPN7-204	ENST00000462815	PCBD1	P61457	104 aa		9.34	□□□□□ -0.91
PTPN7-204	ENST00000462815	METTL21C	Q5VZV1	264 aa		9.34	□□□□□ -0.91
PTPN7-204	ENST00000462815	RBMS3	Q6XE24	437 aa	Known RBP	9.34	□□□□□ -0.91
PTPN7-204	ENST00000462815	VASH1	Q7L8A9	365 aa	Predicted RBP	9.34	□□□□□ -0.91
PTPN7-204	ENST00000462815	JAZF1	Q86VZ6	243 aa		9.34	□□□□□ -0.91
PTPN7-204	ENST00000462815	TREML1	Q86YW5	311 aa		9.34	□□□□□ -0.91
PTPN7-204	ENST00000462815	ALDH16A1	Q8IZ83	802 aa		9.34	□□□□□ -0.91
PTPN7-204	ENST00000462815	PARP8	Q8N3A8	854 aa		9.34	□□□□□ -0.91
PTPN7-204	ENST00000462815	KLHL36	Q8N4N3	616 aa		9.34	□□□□□ -0.91
PTPN7-204	ENST00000462815	POU5F2	Q8N7G0	328 aa		9.34	□□□□□ -0.91
PTPN7-204	ENST00000462815	CCDC197	Q8NCU1	140 aa		9.34	□□□□□ -0.91
PTPN7-204	ENST00000462815	NPEPL1	Q8NDH3	523 aa		9.34	□□□□□ -0.91
PTPN7-204	ENST00000462815	OR2Z1	Q8NG97	314 aa		9.34	□□□□□ -0.91
PTPN7-204	ENST00000462815	FNDC8	Q8TC99	324 aa		9.34	□□□□□ -0.91
PTPN7-204	ENST00000462815	SLC26A7	Q8TE54	656 aa		9.34	□□□□□ -0.91

Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms