RNA–Protein interactions for RNA: ENST00000462730.5

HDAC6-213, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-213ENST00000462730 OR52N5Q8NH56 324 aa12.89□□□□□ -0.35
HDAC6-213ENST00000462730 OR14L1PQ8NHC6 308 aa12.89□□□□□ -0.35
HDAC6-213ENST00000462730 KCTD12Q96CX2 325 aaKnown RBP12.89□□□□□ -0.35
HDAC6-213ENST00000462730 SLC25A44Q96H78 314 aaPredicted RBP12.89□□□□□ -0.35
HDAC6-213ENST00000462730 C4orf45Q96LM5 186 aa12.89□□□□□ -0.35
HDAC6-213ENST00000462730 DERL3Q96Q80 235 aa12.89□□□□□ -0.35
HDAC6-213ENST00000462730 UTP23Q9BRU9 249 aaKnown RBP12.89□□□□□ -0.35
HDAC6-213ENST00000462730 MRPL13Q9BYD1 178 aaKnown RBP12.89□□□□□ -0.35
HDAC6-213ENST00000462730 B3GAT2Q9NPZ5 323 aa12.89□□□□□ -0.35
HDAC6-213ENST00000462730 RBFOX1Q9NWB1 397 aaKnown RBP12.89□□□□□ -0.35
HDAC6-213ENST00000462730 MALT1Q9UDY8 824 aa12.89□□□□□ -0.35
HDAC6-213ENST00000462730 NCKAP5O14513 1909 aa12.89□□□□□ -0.35
HDAC6-213ENST00000462730 PINLYPA6NC86 204 aa12.89□□□□□ -0.35
HDAC6-213ENST00000462730 PIN1P1O15428 100 aa12.89□□□□□ -0.35
HDAC6-213ENST00000462730 SLC19A2O60779 497 aa12.89□□□□□ -0.35
HDAC6-213ENST00000462730 WDPCPO95876 746 aa12.89□□□□□ -0.35
HDAC6-213ENST00000462730 RFPL3SP0C7P2 107 aa12.89□□□□□ -0.35
HDAC6-213ENST00000462730 KIR3DL2P43630 455 aa12.89□□□□□ -0.35
HDAC6-213ENST00000462730 RAB25P57735 213 aa12.89□□□□□ -0.35
HDAC6-213ENST00000462730 RAC1P63000 192 aa12.89□□□□□ -0.35
HDAC6-213ENST00000462730 ROM1Q03395 351 aa12.89□□□□□ -0.35
HDAC6-213ENST00000462730 THEM4Q5T1C6 240 aa12.89□□□□□ -0.35
HDAC6-213ENST00000462730 LINC00346Q8IVM7 164 aa12.89□□□□□ -0.35
HDAC6-213ENST00000462730 GLB1L2Q8IW92 636 aa12.89□□□□□ -0.35
HDAC6-213ENST00000462730 PRSS35Q8N3Z0 413 aa12.89□□□□□ -0.35
HDAC6-213ENST00000462730 OR6X1Q8NH79 312 aa12.89□□□□□ -0.35
HDAC6-213ENST00000462730 RNF128Q8TEB7 428 aa12.89□□□□□ -0.35
HDAC6-213ENST00000462730 SLC39A7Q92504 469 aa12.89□□□□□ -0.35
HDAC6-213ENST00000462730 ORAI1Q96D31 301 aa12.89□□□□□ -0.35
HDAC6-213ENST00000462730 DCBLD2Q96PD2 775 aa12.89□□□□□ -0.35
HDAC6-213ENST00000462730 COMMD4Q9H0A8 199 aa12.89□□□□□ -0.35
HDAC6-213ENST00000462730 SLC25A18Q9H1K4 315 aa12.89□□□□□ -0.35
HDAC6-213ENST00000462730 FREM3P0C091 2139 aa12.88□□□□□ -0.35
HDAC6-213ENST00000462730 IGHV3-15A0A0B4J1V0 119 aa12.88□□□□□ -0.35
HDAC6-213ENST00000462730 A0A0J9YW62 118 aa12.88□□□□□ -0.35
HDAC6-213ENST00000462730 LOC102725191A0A1B0GVB3 256 aa12.88□□□□□ -0.35
HDAC6-213ENST00000462730 A0A1W2PPL8 197 aa12.88□□□□□ -0.35
HDAC6-213ENST00000462730 TMEM212A6NML5 194 aa12.88□□□□□ -0.35
HDAC6-213ENST00000462730 GJE1A6NN92 205 aa12.88□□□□□ -0.35
HDAC6-213ENST00000462730 TNFSF11O14788 317 aa12.88□□□□□ -0.35
HDAC6-213ENST00000462730 NKX2-8O15522 239 aa12.88□□□□□ -0.35
HDAC6-213ENST00000462730 CNR1P21554 472 aa12.88□□□□□ -0.35
HDAC6-213ENST00000462730 RIDAP52758 137 aaKnown RBP12.88□□□□□ -0.35
HDAC6-213ENST00000462730 CSNK2A1P68400 391 aaPredicted RBP12.88□□□□□ -0.35
HDAC6-213ENST00000462730 RASGEF1BQ0VAM2 473 aa12.88□□□□□ -0.35
HDAC6-213ENST00000462730 FAPQ12884 760 aa12.88□□□□□ -0.35
HDAC6-213ENST00000462730 RTP5Q14D33 572 aa12.88□□□□□ -0.35
HDAC6-213ENST00000462730 P2RY14Q15391 338 aa12.88□□□□□ -0.35
HDAC6-213ENST00000462730 OR1C1Q15619 314 aa12.88□□□□□ -0.35
HDAC6-213ENST00000462730 ODF4Q2M2E3 257 aa12.88□□□□□ -0.35
HDAC6-213ENST00000462730 WDR38Q5JTN6 314 aa12.88□□□□□ -0.35
HDAC6-213ENST00000462730 OR7E24Q6IFN5 339 aa12.88□□□□□ -0.35
HDAC6-213ENST00000462730 MZT2BQ6NZ67 158 aa12.88□□□□□ -0.35
HDAC6-213ENST00000462730 METAP1DQ6UB28 335 aaPredicted RBP12.88□□□□□ -0.35
HDAC6-213ENST00000462730 SPERTQ8NA61 448 aa12.88□□□□□ -0.35
HDAC6-213ENST00000462730 DUSP18Q8NEJ0 188 aa12.88□□□□□ -0.35
HDAC6-213ENST00000462730 OR10H5Q8NGA6 315 aa12.88□□□□□ -0.35
HDAC6-213ENST00000462730 ZFAND1Q8TCF1 268 aa12.88□□□□□ -0.35
HDAC6-213ENST00000462730 C11orf40Q8WZ69 217 aa12.88□□□□□ -0.35
HDAC6-213ENST00000462730 NAA11Q9BSU3 229 aaPredicted RBP12.88□□□□□ -0.35
HDAC6-213ENST00000462730 PLA2G3Q9NZ20 509 aa12.88□□□□□ -0.35
HDAC6-213ENST00000462730 KLHL9Q9P2J3 617 aa12.88□□□□□ -0.35
HDAC6-213ENST00000462730 GTF2A1LQ9UNN4 478 aa12.88□□□□□ -0.35
HDAC6-213ENST00000462730 AK6Q9Y3D8 172 aaKnown RBP12.88□□□□□ -0.35
HDAC6-213ENST00000462730 LRP12Q9Y561 859 aa12.88□□□□□ -0.35
HDAC6-213ENST00000462730 ALG5Q9Y673 324 aa12.88□□□□□ -0.35
HDAC6-213ENST00000462730 TRBV5-5A0A0J9YX44 114 aa12.87□□□□□ -0.35
HDAC6-213ENST00000462730 TRABD2BA6NFA1 517 aa12.87□□□□□ -0.35
HDAC6-213ENST00000462730 ZNF726A6NNF4 738 aa12.87□□□□□ -0.35
HDAC6-213ENST00000462730 EIF1BO60739 113 aaKnown RBP12.87□□□□□ -0.35
HDAC6-213ENST00000462730 AQP8O94778 261 aa12.87□□□□□ -0.35
HDAC6-213ENST00000462730 ZNF432O94892 652 aa12.87□□□□□ -0.35
HDAC6-213ENST00000462730 HRGP04196 525 aa12.87□□□□□ -0.35
HDAC6-213ENST00000462730 WT1P19544 449 aaPredicted RBP12.87□□□□□ -0.35
HDAC6-213ENST00000462730 PTBP1P26599 531 aaKnown RBP eCLIP12.87□□□□□ -0.35
HDAC6-213ENST00000462730 SOX2P48431 317 aa12.87□□□□□ -0.35
HDAC6-213ENST00000462730 EVX1P49640 407 aa12.87□□□□□ -0.35
HDAC6-213ENST00000462730 RRADP55042 308 aa12.87□□□□□ -0.35
HDAC6-213ENST00000462730 CLDN17P56750 224 aa12.87□□□□□ -0.35
HDAC6-213ENST00000462730 H3F3AP84243 136 aa12.87□□□□□ -0.35
HDAC6-213ENST00000462730 Q499Y3 187 aa12.87□□□□□ -0.35
HDAC6-213ENST00000462730 CEP78Q5JTW2 689 aa12.87□□□□□ -0.35
HDAC6-213ENST00000462730 TEX30Q5JUR7 227 aa12.87□□□□□ -0.35
HDAC6-213ENST00000462730 SIGIRRQ6IA17 410 aa12.87□□□□□ -0.35
HDAC6-213ENST00000462730 FDX2Q6P4F2 183 aa12.87□□□□□ -0.35
HDAC6-213ENST00000462730 DCXRQ7Z4W1 244 aa12.87□□□□□ -0.35
HDAC6-213ENST00000462730 GLCCI1Q86VQ1 547 aa12.87□□□□□ -0.35
HDAC6-213ENST00000462730 SUN5Q8TC36 379 aa12.87□□□□□ -0.35
HDAC6-213ENST00000462730 UCN2Q96RP3 112 aa12.87□□□□□ -0.35
HDAC6-213ENST00000462730 HES7Q9BYE0 225 aa12.87□□□□□ -0.35
HDAC6-213ENST00000462730 LYRM1O43325 122 aa12.87□□□□□ -0.35
HDAC6-213ENST00000462730 ZNF254O75437 659 aa12.87□□□□□ -0.35
HDAC6-213ENST00000462730 TRAPPC6AO75865 159 aa12.87□□□□□ -0.35
HDAC6-213ENST00000462730 FAM157BP0CG42 384 aa12.87□□□□□ -0.35
HDAC6-213ENST00000462730 ELK1P19419 428 aa12.87□□□□□ -0.35
HDAC6-213ENST00000462730 SRMP19623 302 aa12.87□□□□□ -0.35
HDAC6-213ENST00000462730 MAPK3P27361 379 aaPredicted RBP12.87□□□□□ -0.35
HDAC6-213ENST00000462730 GDF1P27539 372 aa12.87□□□□□ -0.35
HDAC6-213ENST00000462730 LAP3P28838 519 aa12.87□□□□□ -0.35
HDAC6-213ENST00000462730 MFGE8Q08431 387 aaPredicted RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms