RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 CCT8L2Q96SF2 557 aa8.69□□□□□ -1.02
SF3A3-204ENST00000462258 WACQ9BTA9 647 aa8.69□□□□□ -1.02
SF3A3-204ENST00000462258 BEX2Q9BXY8 128 aa8.69□□□□□ -1.02
SF3A3-204ENST00000462258 OR2J1Q9GZK6 312 aa8.69□□□□□ -1.02
SF3A3-204ENST00000462258 SHARPINQ9H0F6 387 aa8.69□□□□□ -1.02
SF3A3-204ENST00000462258 OR52D1Q9H346 318 aa8.69□□□□□ -1.02
SF3A3-204ENST00000462258 RERGLQ9H628 205 aa8.69□□□□□ -1.02
SF3A3-204ENST00000462258 IL1RAPQ9NPH3 570 aa8.69□□□□□ -1.02
SF3A3-204ENST00000462258 ZNF275Q9NSD4 429 aaPredicted RBP8.69□□□□□ -1.02
SF3A3-204ENST00000462258 ASH2LQ9UBL3 628 aa8.69□□□□□ -1.02
SF3A3-204ENST00000462258 TMCC3Q9ULS5 477 aa8.69□□□□□ -1.02
SF3A3-204ENST00000462258 IER3IP1Q9Y5U9 82 aa8.69□□□□□ -1.02
SF3A3-204ENST00000462258 MXRA5Q9NR99 2828 aa8.68□□□□□ -1.02
SF3A3-204ENST00000462258 PLSCR5A0PG75 271 aa8.68□□□□□ -1.02
SF3A3-204ENST00000462258 DYNC1I1O14576 645 aa8.68□□□□□ -1.02
SF3A3-204ENST00000462258 SGCEO43556 437 aa8.68□□□□□ -1.02
SF3A3-204ENST00000462258 RP2O75695 350 aa8.68□□□□□ -1.02
SF3A3-204ENST00000462258 FAM107AO95990 144 aa8.68□□□□□ -1.02
SF3A3-204ENST00000462258 IFNA2P01563 188 aa8.68□□□□□ -1.02
SF3A3-204ENST00000462258 COX5BP10606 129 aa8.68□□□□□ -1.02
SF3A3-204ENST00000462258 HNF1AP20823 631 aa8.68□□□□□ -1.02
SF3A3-204ENST00000462258 COL8A2P25067 703 aa8.68□□□□□ -1.02
SF3A3-204ENST00000462258 IFNGR2P38484 337 aa8.68□□□□□ -1.02
SF3A3-204ENST00000462258 ZNF81P51508 661 aa8.68□□□□□ -1.02
SF3A3-204ENST00000462258 ARHGDIAP52565 204 aa8.68□□□□□ -1.02
SF3A3-204ENST00000462258 PPP1CBP62140 327 aa8.68□□□□□ -1.02
SF3A3-204ENST00000462258 CCL8P80075 99 aa8.68□□□□□ -1.02
SF3A3-204ENST00000462258 MOGQ16653 247 aa8.68□□□□□ -1.02
SF3A3-204ENST00000462258 MTX3Q5HYI7 312 aa8.68□□□□□ -1.02
SF3A3-204ENST00000462258 MBNL2Q5VZF2 373 aaKnown RBP8.68□□□□□ -1.02
SF3A3-204ENST00000462258 OTPQ5XKR4 325 aa8.68□□□□□ -1.02
SF3A3-204ENST00000462258 LEG1Q6P5S2 330 aa8.68□□□□□ -1.02
SF3A3-204ENST00000462258 ARL9Q6T311 187 aa8.68□□□□□ -1.02
SF3A3-204ENST00000462258 ZNF620Q6ZNG0 422 aa8.68□□□□□ -1.02
SF3A3-204ENST00000462258 IL17RELQ6ZVW7 336 aa8.68□□□□□ -1.02
SF3A3-204ENST00000462258 VASH1Q7L8A9 365 aaPredicted RBP8.68□□□□□ -1.02
SF3A3-204ENST00000462258 JAZF1Q86VZ6 243 aa8.68□□□□□ -1.02
SF3A3-204ENST00000462258 C1orf174Q8IYL3 243 aa8.68□□□□□ -1.02
SF3A3-204ENST00000462258 CCDC197Q8NCU1 140 aa8.68□□□□□ -1.02
SF3A3-204ENST00000462258 NPEPL1Q8NDH3 523 aa8.68□□□□□ -1.02
SF3A3-204ENST00000462258 KLF14Q8TD94 323 aaPredicted RBP8.68□□□□□ -1.02
SF3A3-204ENST00000462258 MARS2Q96GW9 593 aaKnown RBP8.68□□□□□ -1.02
SF3A3-204ENST00000462258 C4orf45Q96LM5 186 aa8.68□□□□□ -1.02
SF3A3-204ENST00000462258 ERMAPQ96PL5 475 aaPredicted RBP8.68□□□□□ -1.02
SF3A3-204ENST00000462258 NUAK2Q9H093 628 aa8.68□□□□□ -1.02
SF3A3-204ENST00000462258 MUC13Q9H3R2 512 aa8.68□□□□□ -1.02
SF3A3-204ENST00000462258 NARFLQ9H6Q4 476 aa8.68□□□□□ -1.02
SF3A3-204ENST00000462258 SAP30LQ9HAJ7 183 aa8.68□□□□□ -1.02
SF3A3-204ENST00000462258 ELOVL3Q9HB03 270 aa8.68□□□□□ -1.02
SF3A3-204ENST00000462258 NKIRAS2Q9NYR9 191 aa8.68□□□□□ -1.02
SF3A3-204ENST00000462258 PLEK2Q9NYT0 353 aa8.68□□□□□ -1.02
SF3A3-204ENST00000462258 ACTR3BQ9P1U1 418 aa8.68□□□□□ -1.02
SF3A3-204ENST00000462258 CGGBP1Q9UFW8 167 aaPredicted RBP8.68□□□□□ -1.02
SF3A3-204ENST00000462258 COA3Q9Y2R0 106 aaPredicted RBP8.68□□□□□ -1.02
SF3A3-204ENST00000462258 POLR1DQ9Y2S0 133 aa8.68□□□□□ -1.02
SF3A3-204ENST00000462258 ZSCAN5BA6NJL1 495 aa8.67□□□□□ -1.02
SF3A3-204ENST00000462258 B2RBV5 119 aa8.67□□□□□ -1.02
SF3A3-204ENST00000462258 TPD52L2O43399 206 aaKnown RBP8.67□□□□□ -1.02
SF3A3-204ENST00000462258 PPIHO43447 177 aaKnown RBP8.67□□□□□ -1.02
SF3A3-204ENST00000462258 CDC14BO60729 498 aa8.67□□□□□ -1.02
SF3A3-204ENST00000462258 MPZL1O95297 269 aa8.67□□□□□ -1.02
SF3A3-204ENST00000462258 TGFAP01135 160 aa8.67□□□□□ -1.02
SF3A3-204ENST00000462258 NGFP01138 241 aa8.67□□□□□ -1.02
SF3A3-204ENST00000462258 GAAP10253 952 aa8.67□□□□□ -1.02
SF3A3-204ENST00000462258 CALB2P22676 271 aa8.67□□□□□ -1.02
SF3A3-204ENST00000462258 CRABP1P29762 137 aa8.67□□□□□ -1.02
SF3A3-204ENST00000462258 CDKN2AP42771 156 aaKnown RBP8.67□□□□□ -1.02
SF3A3-204ENST00000462258 MAGEA2P43356 314 aa8.67□□□□□ -1.02
SF3A3-204ENST00000462258 GSSP48637 474 aa8.67□□□□□ -1.02
SF3A3-204ENST00000462258 MMP15P51511 669 aa8.67□□□□□ -1.02
SF3A3-204ENST00000462258 CDH15P55291 814 aa8.67□□□□□ -1.02
SF3A3-204ENST00000462258 LSM6P62312 80 aaKnown RBP8.67□□□□□ -1.02
SF3A3-204ENST00000462258 TSTQ16762 297 aaKnown RBP8.67□□□□□ -1.02
SF3A3-204ENST00000462258 RFX4Q33E94 735 aa8.67□□□□□ -1.02
SF3A3-204ENST00000462258 ZMAT1Q5H9K5 638 aa8.67□□□□□ -1.02
SF3A3-204ENST00000462258 FAM209AQ5JX71 171 aa8.67□□□□□ -1.02
SF3A3-204ENST00000462258 FAM120AOSQ5T036 256 aa8.67□□□□□ -1.02
SF3A3-204ENST00000462258 LCN8Q6JVE9 175 aa8.67□□□□□ -1.02
SF3A3-204ENST00000462258 PGBD2Q6P3X8 592 aa8.67□□□□□ -1.02
SF3A3-204ENST00000462258 PGM2L1Q6PCE3 622 aa8.67□□□□□ -1.02
SF3A3-204ENST00000462258 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.67□□□□□ -1.02
SF3A3-204ENST00000462258 ARHGAP24Q8N264 748 aa8.67□□□□□ -1.02
SF3A3-204ENST00000462258 LINC01356Q8N9X3 169 aa8.67□□□□□ -1.02
SF3A3-204ENST00000462258 SDR9C7Q8NEX9 313 aa8.67□□□□□ -1.02
SF3A3-204ENST00000462258 OR9Q2Q8NGE9 314 aa8.67□□□□□ -1.02
SF3A3-204ENST00000462258 CLDND2Q8NHS1 167 aa8.67□□□□□ -1.02
SF3A3-204ENST00000462258 NSL1Q96IY1 281 aa8.67□□□□□ -1.02
SF3A3-204ENST00000462258 SAMD8Q96LT4 415 aa8.67□□□□□ -1.02
SF3A3-204ENST00000462258 TSSK2Q96PF2 358 aa8.67□□□□□ -1.02
SF3A3-204ENST00000462258 IFT27Q9BW83 186 aa8.67□□□□□ -1.02
SF3A3-204ENST00000462258 RACGAP1Q9H0H5 632 aa8.67□□□□□ -1.02
SF3A3-204ENST00000462258 DECR2Q9NUI1 292 aa8.67□□□□□ -1.02
SF3A3-204ENST00000462258 ATPIF1Q9UII2 106 aa8.67□□□□□ -1.02
SF3A3-204ENST00000462258 LYVE1Q9Y5Y7 322 aa8.67□□□□□ -1.02
SF3A3-204ENST00000462258 IGLV1-36A0A0B4J1U3 117 aa8.66□□□□□ -1.02
SF3A3-204ENST00000462258 IGHV1-69-2A0A0G2JMI3 117 aa8.66□□□□□ -1.02
SF3A3-204ENST00000462258 TCRBV5S2A0A599 114 aa8.66□□□□□ -1.02
SF3A3-204ENST00000462258 OR6C6A6NF89 314 aa8.66□□□□□ -1.02
SF3A3-204ENST00000462258 CLDN25C9JDP6 229 aa8.66□□□□□ -1.02
SF3A3-204ENST00000462258 TNFRSF11BO00300 401 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms