RNA–Protein interactions for RNA: ENST00000461347.5

NCL-207, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 3,967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-207ENST00000461347 C1orf140Q5VVS0 124 aa13.09□□□□□ -0.31
NCL-207ENST00000461347 LPCAT3Q6P1A2 487 aa13.09□□□□□ -0.31
NCL-207ENST00000461347 UEVLDQ8IX04 471 aa13.09□□□□□ -0.31
NCL-207ENST00000461347 FAM174AQ8TBP5 190 aa13.09□□□□□ -0.31
NCL-207ENST00000461347 TMEM59Q9BXS4 323 aa13.09□□□□□ -0.31
NCL-207ENST00000461347 BANF2Q9H503 90 aa13.09□□□□□ -0.31
NCL-207ENST00000461347 CUTCQ9NTM9 273 aa13.09□□□□□ -0.31
NCL-207ENST00000461347 RP1L1Q8IWN7 2480 aaPredicted RBP13.09□□□□□ -0.31
NCL-207ENST00000461347 KNTC1P50748 2209 aa13.09□□□□□ -0.31
NCL-207ENST00000461347 SLC22A23A1A5C7 686 aa13.08□□□□□ -0.31
NCL-207ENST00000461347 RAB6AP20340 208 aa13.08□□□□□ -0.31
NCL-207ENST00000461347 CD1CP29017 333 aa13.08□□□□□ -0.31
NCL-207ENST00000461347 EPHA4P54764 986 aa13.08□□□□□ -0.31
NCL-207ENST00000461347 HSD17B7P56937 341 aa13.08□□□□□ -0.31
NCL-207ENST00000461347 VAMP2P63027 116 aa13.08□□□□□ -0.31
NCL-207ENST00000461347 STX12Q86Y82 276 aa13.08□□□□□ -0.31
NCL-207ENST00000461347 HOXB13Q92826 284 aaPredicted RBP13.08□□□□□ -0.31
NCL-207ENST00000461347 TSLPQ969D9 159 aa13.08□□□□□ -0.31
NCL-207ENST00000461347 TCTN2Q96GX1 697 aa13.08□□□□□ -0.31
NCL-207ENST00000461347 SCPEP1Q9HB40 452 aa13.08□□□□□ -0.31
NCL-207ENST00000461347 TMEM200CA6NKL6 621 aa13.08□□□□□ -0.32
NCL-207ENST00000461347 WDPCPO95876 746 aa13.08□□□□□ -0.32
NCL-207ENST00000461347 SNRNP70P08621 437 aaKnown RBP13.08□□□□□ -0.32
NCL-207ENST00000461347 ZNF43P17038 809 aa13.08□□□□□ -0.32
NCL-207ENST00000461347 ZNF93P35789 620 aaPredicted RBP13.08□□□□□ -0.32
NCL-207ENST00000461347 SERPINF1P36955 418 aa13.08□□□□□ -0.32
NCL-207ENST00000461347 DHRS2Q13268 280 aa13.08□□□□□ -0.32
NCL-207ENST00000461347 OR52W1Q6IF63 320 aa13.08□□□□□ -0.32
NCL-207ENST00000461347 RAB11FIP2Q7L804 512 aa13.08□□□□□ -0.32
NCL-207ENST00000461347 KISS1RQ969F8 398 aaPredicted RBP13.08□□□□□ -0.32
NCL-207ENST00000461347 PNPLA2Q96AD5 504 aa13.08□□□□□ -0.32
NCL-207ENST00000461347 BMFQ96LC9 184 aa13.08□□□□□ -0.32
NCL-207ENST00000461347 ABHD6Q9BV23 337 aa13.08□□□□□ -0.32
NCL-207ENST00000461347 ZNF629Q9UEG4 869 aaPredicted RBP13.08□□□□□ -0.32
NCL-207ENST00000461347 RAB22AQ9UL26 194 aa13.08□□□□□ -0.32
NCL-207ENST00000461347 RNF215Q9Y6U7 377 aa13.08□□□□□ -0.32
NCL-207ENST00000461347 TNFRSF10CO14798 259 aa13.08□□□□□ -0.32
NCL-207ENST00000461347 ICOSLGO75144 302 aa13.08□□□□□ -0.32
NCL-207ENST00000461347 SERPINA5P05154 406 aa13.08□□□□□ -0.32
NCL-207ENST00000461347 NMBP08949 121 aa13.08□□□□□ -0.32
NCL-207ENST00000461347 POLR2HP52434 150 aaKnown RBP13.08□□□□□ -0.32
NCL-207ENST00000461347 RAB2AP61019 212 aa13.08□□□□□ -0.32
NCL-207ENST00000461347 HERV-K104P61576 105 aa13.08□□□□□ -0.32
NCL-207ENST00000461347 FAM122BQ7Z309 247 aa13.08□□□□□ -0.32
NCL-207ENST00000461347 SLC22A24Q8N4F4 322 aa13.08□□□□□ -0.32
NCL-207ENST00000461347 CLRN3Q8NCR9 226 aa13.08□□□□□ -0.32
NCL-207ENST00000461347 SLC25A38Q96DW6 304 aa13.08□□□□□ -0.32
NCL-207ENST00000461347 ZNF75AQ96N20 296 aa13.08□□□□□ -0.32
NCL-207ENST00000461347 CHST6Q9GZX3 395 aa13.08□□□□□ -0.32
NCL-207ENST00000461347 SERPINA2P20848 420 aa13.07□□□□□ -0.32
NCL-207ENST00000461347 CTHP32929 405 aa13.07□□□□□ -0.32
NCL-207ENST00000461347 GLP1RP43220 463 aa13.07□□□□□ -0.32
NCL-207ENST00000461347 TNFRSF4P43489 277 aa13.07□□□□□ -0.32
NCL-207ENST00000461347 FAM53BQ14153 422 aa13.07□□□□□ -0.32
NCL-207ENST00000461347 PEA15Q15121 130 aa13.07□□□□□ -0.32
NCL-207ENST00000461347 FAM199XQ6PEV8 388 aaPredicted RBP13.07□□□□□ -0.32
NCL-207ENST00000461347 OR4D10Q8NGI6 311 aa13.07□□□□□ -0.32
NCL-207ENST00000461347 OTOSQ8NHW6 89 aa13.07□□□□□ -0.32
NCL-207ENST00000461347 LHFPL5Q8TAF8 219 aa13.07□□□□□ -0.32
NCL-207ENST00000461347 FNDC9Q8TBE3 224 aa13.07□□□□□ -0.32
NCL-207ENST00000461347 OR5B2Q96R09 309 aa13.07□□□□□ -0.32
NCL-207ENST00000461347 OR8B4Q96RC9 309 aa13.07□□□□□ -0.32
NCL-207ENST00000461347 RPP25Q9BUL9 199 aaKnown RBP13.07□□□□□ -0.32
NCL-207ENST00000461347 PARP12Q9H0J9 701 aaKnown RBP13.07□□□□□ -0.32
NCL-207ENST00000461347 PTGES2Q9H7Z7 377 aa13.07□□□□□ -0.32
NCL-207ENST00000461347 FAM60AQ9NP50 221 aa13.07□□□□□ -0.32
NCL-207ENST00000461347 B9D1Q9UPM9 204 aa13.07□□□□□ -0.32
NCL-207ENST00000461347 MRPS28Q9Y2Q9 187 aaKnown RBP13.07□□□□□ -0.32
NCL-207ENST00000461347 PRSS37A4D1T9 235 aa13.07□□□□□ -0.32
NCL-207ENST00000461347 A8MVM7 634 aa13.07□□□□□ -0.32
NCL-207ENST00000461347 HRH1P35367 487 aa13.07□□□□□ -0.32
NCL-207ENST00000461347 RGS19P49795 217 aa13.07□□□□□ -0.32
NCL-207ENST00000461347 EFNB2P52799 333 aa13.07□□□□□ -0.32
NCL-207ENST00000461347 NAXDQ8IW45 347 aa13.07□□□□□ -0.32
NCL-207ENST00000461347 ESX1Q8N693 406 aa13.07□□□□□ -0.32
NCL-207ENST00000461347 C1orf198Q9H425 327 aa13.07□□□□□ -0.32
NCL-207ENST00000461347 A0A0G2JK05 382 aa13.07□□□□□ -0.32
NCL-207ENST00000461347 HMSDA8MTL9 139 aa13.07□□□□□ -0.32
NCL-207ENST00000461347 PIN1P1O15428 100 aa13.07□□□□□ -0.32
NCL-207ENST00000461347 GLULP15104 373 aa13.07□□□□□ -0.32
NCL-207ENST00000461347 CNR1P21554 472 aa13.07□□□□□ -0.32
NCL-207ENST00000461347 DPP4P27487 766 aa13.07□□□□□ -0.32
NCL-207ENST00000461347 PAN3Q58A45 887 aaKnown RBP13.07□□□□□ -0.32
NCL-207ENST00000461347 EMC4Q5J8M3 183 aa13.07□□□□□ -0.32
NCL-207ENST00000461347 SEZ6L2Q6UXD5 910 aa13.07□□□□□ -0.32
NCL-207ENST00000461347 BVESQ8NE79 360 aa13.07□□□□□ -0.32
NCL-207ENST00000461347 MARCH1Q8TCQ1 289 aa13.07□□□□□ -0.32
NCL-207ENST00000461347 MAFIPQ8WZ33 124 aa13.07□□□□□ -0.32
NCL-207ENST00000461347 FGF14Q92915 247 aa13.07□□□□□ -0.32
NCL-207ENST00000461347 DDIT4LQ96D03 193 aa13.07□□□□□ -0.32
NCL-207ENST00000461347 CMBLQ96DG6 245 aa13.07□□□□□ -0.32
NCL-207ENST00000461347 CASP8AP2Q9UKL3 1982 aa13.07□□□□□ -0.32
NCL-207ENST00000461347 KLF4O43474 513 aa13.06□□□□□ -0.32
NCL-207ENST00000461347 GABRR1P24046 479 aa13.06□□□□□ -0.32
NCL-207ENST00000461347 PSMB6P28072 239 aa13.06□□□□□ -0.32
NCL-207ENST00000461347 BIDP55957 195 aa13.06□□□□□ -0.32
NCL-207ENST00000461347 HTRA4P83105 476 aaPredicted RBP13.06□□□□□ -0.32
NCL-207ENST00000461347 TMEM240Q5SV17 173 aa13.06□□□□□ -0.32
NCL-207ENST00000461347 PDSS1Q5T2R2 415 aa13.06□□□□□ -0.32
NCL-207ENST00000461347 SGPP2Q8IWX5 399 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms