RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 NHLRC1Q6VVB1 395 aa13.91□□□□□ -0.18
LMNB1-203ENST00000460265 WWTR1Q9GZV5 400 aa13.91□□□□□ -0.18
LMNB1-203ENST00000460265 MED29Q9NX70 200 aa13.91□□□□□ -0.18
LMNB1-203ENST00000460265 DCAF16Q9NXF7 216 aa13.91□□□□□ -0.18
LMNB1-203ENST00000460265 AKR7A3O95154 331 aa13.9□□□□□ -0.18
LMNB1-203ENST00000460265 CD2P06729 351 aa13.9□□□□□ -0.18
LMNB1-203ENST00000460265 NPR2P20594 1047 aa13.9□□□□□ -0.18
LMNB1-203ENST00000460265 GUCA1AP43080 201 aaPredicted RBP13.9□□□□□ -0.18
LMNB1-203ENST00000460265 PRKXP51817 358 aa13.9□□□□□ -0.18
LMNB1-203ENST00000460265 NANOS3P60323 173 aaKnown RBP13.9□□□□□ -0.18
LMNB1-203ENST00000460265 EIF2B1Q14232 305 aaKnown RBP13.9□□□□□ -0.18
LMNB1-203ENST00000460265 EBPQ15125 230 aaKnown RBP13.9□□□□□ -0.18
LMNB1-203ENST00000460265 ZNF528Q3MIS6 628 aa13.9□□□□□ -0.18
LMNB1-203ENST00000460265 YOD1Q5VVQ6 348 aaPredicted RBP13.9□□□□□ -0.18
LMNB1-203ENST00000460265 B3GNTL1Q67FW5 361 aaPredicted RBP13.9□□□□□ -0.18
LMNB1-203ENST00000460265 TMEM225Q6GV28 225 aa13.9□□□□□ -0.18
LMNB1-203ENST00000460265 GUSBP11Q6P575 273 aa13.9□□□□□ -0.18
LMNB1-203ENST00000460265 FAM199XQ6PEV8 388 aaPredicted RBP13.9□□□□□ -0.18
LMNB1-203ENST00000460265 CMTM4Q8IZR5 234 aa13.9□□□□□ -0.18
LMNB1-203ENST00000460265 CHST4Q8NCG5 386 aa13.9□□□□□ -0.18
LMNB1-203ENST00000460265 ZNF485Q8NCK3 441 aa13.9□□□□□ -0.18
LMNB1-203ENST00000460265 OR10AC1Q8NH08 325 aa13.9□□□□□ -0.18
LMNB1-203ENST00000460265 WNT2BQ93097 391 aa13.9□□□□□ -0.18
LMNB1-203ENST00000460265 DEFB126Q9BYW3 111 aa13.9□□□□□ -0.18
LMNB1-203ENST00000460265 PPP4R1LQ9P1A2 415 aa13.9□□□□□ -0.18
LMNB1-203ENST00000460265 CKLFQ9UBR5 152 aa13.9□□□□□ -0.18
LMNB1-203ENST00000460265 NPFFR2Q9Y5X5 522 aa13.9□□□□□ -0.18
LMNB1-203ENST00000460265 NPTNQ9Y639 398 aa13.9□□□□□ -0.18
LMNB1-203ENST00000460265 CREBL2O60519 120 aaPredicted RBP13.9□□□□□ -0.18
LMNB1-203ENST00000460265 GDNFP39905 211 aa13.9□□□□□ -0.18
LMNB1-203ENST00000460265 SLC6A8P48029 635 aa13.9□□□□□ -0.18
LMNB1-203ENST00000460265 RAG2P55895 527 aa13.9□□□□□ -0.18
LMNB1-203ENST00000460265 DMWDQ09019 674 aa13.9□□□□□ -0.18
LMNB1-203ENST00000460265 C9orf40Q8IXQ3 194 aa13.9□□□□□ -0.18
LMNB1-203ENST00000460265 OR51D1Q8NGF3 324 aa13.9□□□□□ -0.18
LMNB1-203ENST00000460265 GLYATL2Q8WU03 294 aa13.9□□□□□ -0.18
LMNB1-203ENST00000460265 FCAMRQ8WWV6 532 aa13.9□□□□□ -0.18
LMNB1-203ENST00000460265 ZNF775Q96BV0 537 aaPredicted RBP13.9□□□□□ -0.18
LMNB1-203ENST00000460265 GPN1Q9HCN4 374 aaPredicted RBP13.9□□□□□ -0.18
LMNB1-203ENST00000460265 KLK11Q9UBX7 282 aa13.9□□□□□ -0.18
LMNB1-203ENST00000460265 A0A1W2PR77 199 aa13.89□□□□□ -0.19
LMNB1-203ENST00000460265 WRBO00258 174 aa13.89□□□□□ -0.19
LMNB1-203ENST00000460265 ST8SIA5O15466 376 aa13.89□□□□□ -0.19
LMNB1-203ENST00000460265 MPZL1O95297 269 aa13.89□□□□□ -0.19
LMNB1-203ENST00000460265 HPP00738 406 aa13.89□□□□□ -0.19
LMNB1-203ENST00000460265 GIPP09681 153 aaPredicted RBP13.89□□□□□ -0.19
LMNB1-203ENST00000460265 SMIM6P0DI80 62 aa13.89□□□□□ -0.19
LMNB1-203ENST00000460265 GIMD1P0DJR0 217 aa13.89□□□□□ -0.19
LMNB1-203ENST00000460265 FOSL2P15408 326 aa13.89□□□□□ -0.19
LMNB1-203ENST00000460265 PSMB1P20618 241 aaKnown RBP13.89□□□□□ -0.19
LMNB1-203ENST00000460265 EPHA4P54764 986 aa13.89□□□□□ -0.19
LMNB1-203ENST00000460265 LTBQ06643 244 aa13.89□□□□□ -0.19
LMNB1-203ENST00000460265 SKP2Q13309 424 aa13.89□□□□□ -0.19
LMNB1-203ENST00000460265 ALKBH1Q13686 389 aaKnown RBP13.89□□□□□ -0.19
LMNB1-203ENST00000460265 C1orf140Q5VVS0 124 aa13.89□□□□□ -0.19
LMNB1-203ENST00000460265 HACD4Q5VWC8 232 aa13.89□□□□□ -0.19
LMNB1-203ENST00000460265 LYSMD4Q5XG99 296 aa13.89□□□□□ -0.19
LMNB1-203ENST00000460265 ATG4DQ86TL0 474 aaPredicted RBP13.89□□□□□ -0.19
LMNB1-203ENST00000460265 PUSL1Q8N0Z8 303 aaKnown RBP13.89□□□□□ -0.19
LMNB1-203ENST00000460265 EIF4E3Q8N5X7 224 aaKnown RBP13.89□□□□□ -0.19
LMNB1-203ENST00000460265 PLPP7Q8NBV4 271 aa13.89□□□□□ -0.19
LMNB1-203ENST00000460265 UBL7Q96S82 380 aaPredicted RBP13.89□□□□□ -0.19
LMNB1-203ENST00000460265 ZNF649Q9BS31 505 aa13.89□□□□□ -0.19
LMNB1-203ENST00000460265 COA3Q9Y2R0 106 aaPredicted RBP13.89□□□□□ -0.19
LMNB1-203ENST00000460265 KLHDC2Q9Y2U9 406 aa13.89□□□□□ -0.19
LMNB1-203ENST00000460265 CACNA1GO43497 2377 aa13.89□□□□□ -0.19
LMNB1-203ENST00000460265 TRAV18A0A075B6X5 111 aa13.89□□□□□ -0.19
LMNB1-203ENST00000460265 BLACEA4D250 179 aa13.89□□□□□ -0.19
LMNB1-203ENST00000460265 PTGFRP43088 359 aa13.89□□□□□ -0.19
LMNB1-203ENST00000460265 ART1P52961 327 aa13.89□□□□□ -0.19
LMNB1-203ENST00000460265 MDGA2Q7Z553 956 aa13.89□□□□□ -0.19
LMNB1-203ENST00000460265 NAXDQ8IW45 347 aa13.89□□□□□ -0.19
LMNB1-203ENST00000460265 TMEM234Q8WY98 164 aa13.89□□□□□ -0.19
LMNB1-203ENST00000460265 MR1Q95460 341 aa13.89□□□□□ -0.19
LMNB1-203ENST00000460265 KCTD12Q96CX2 325 aaKnown RBP13.89□□□□□ -0.19
LMNB1-203ENST00000460265 TSPAN32Q96QS1 320 aa13.89□□□□□ -0.19
LMNB1-203ENST00000460265 LANCL2Q9NS86 450 aa13.89□□□□□ -0.19
LMNB1-203ENST00000460265 TMEM14AQ9Y6G1 99 aa13.89□□□□□ -0.19
LMNB1-203ENST00000460265 TMEM200CA6NKL6 621 aa13.89□□□□□ -0.19
LMNB1-203ENST00000460265 PRAF2O60831 178 aa13.89□□□□□ -0.19
LMNB1-203ENST00000460265 S100A8P05109 93 aa13.89□□□□□ -0.19
LMNB1-203ENST00000460265 LDLRAD3Q86YD5 345 aa13.89□□□□□ -0.19
LMNB1-203ENST00000460265 OR51A4Q8NGJ6 313 aa13.89□□□□□ -0.19
LMNB1-203ENST00000460265 GPR148Q8TDV2 347 aa13.89□□□□□ -0.19
LMNB1-203ENST00000460265 PGLYRP3Q96LB9 341 aa13.89□□□□□ -0.19
LMNB1-203ENST00000460265 PFDN5Q99471 154 aa13.89□□□□□ -0.19
LMNB1-203ENST00000460265 CMKLR1Q99788 373 aa13.89□□□□□ -0.19
LMNB1-203ENST00000460265 MFFQ9GZY8 342 aa13.89□□□□□ -0.19
LMNB1-203ENST00000460265 PHF3Q92576 2039 aaKnown RBP13.88□□□□□ -0.19
LMNB1-203ENST00000460265 IGKV1D-42A0A075B6H8 117 aa13.88□□□□□ -0.19
LMNB1-203ENST00000460265 TRAV36DV7A0A075B6V5 113 aa13.88□□□□□ -0.19
LMNB1-203ENST00000460265 ARPC3O15145 178 aa13.88□□□□□ -0.19
LMNB1-203ENST00000460265 ZNF41P51814 821 aaPredicted RBP13.88□□□□□ -0.19
LMNB1-203ENST00000460265 RAB5BP61020 215 aa13.88□□□□□ -0.19
LMNB1-203ENST00000460265 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.88□□□□□ -0.192e-6■□□□□ 10.1
LMNB1-203ENST00000460265 AKIRIN2Q53H80 203 aa13.88□□□□□ -0.19
LMNB1-203ENST00000460265 FAM69AQ5T7M9 428 aa13.88□□□□□ -0.19
LMNB1-203ENST00000460265 SLC16A9Q7RTY1 509 aa13.88□□□□□ -0.19
LMNB1-203ENST00000460265 WDR77Q9BQA1 342 aaPredicted RBP13.88□□□□□ -0.19
LMNB1-203ENST00000460265 PAPOLGQ9BWT3 736 aaKnown RBP13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms