RNA–Protein interactions for RNA: ENST00000460170.2

PTPRU-205, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,337 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-205ENST00000460170 IKZF1Q13422 519 aa13.41□□□□□ -0.26
PTPRU-205ENST00000460170 IAH1Q2TAA2 248 aaPredicted RBP13.41□□□□□ -0.26
PTPRU-205ENST00000460170 PRSS41Q7RTY9 318 aa13.41□□□□□ -0.26
PTPRU-205ENST00000460170 KMT5CQ86Y97 462 aa13.41□□□□□ -0.26
PTPRU-205ENST00000460170 CNEP1R1Q8N9A8 125 aa13.41□□□□□ -0.26
PTPRU-205ENST00000460170 SLCO1C1Q9NYB5 712 aa13.41□□□□□ -0.26
PTPRU-205ENST00000460170 B9D1Q9UPM9 204 aa13.41□□□□□ -0.26
PTPRU-205ENST00000460170 S100A12P80511 92 aa13.41□□□□□ -0.26
PTPRU-205ENST00000460170 ARF1P84077 181 aaKnown RBP13.41□□□□□ -0.26
PTPRU-205ENST00000460170 ZNF74Q16587 644 aa13.41□□□□□ -0.26
PTPRU-205ENST00000460170 FAAP20Q6NZ36 180 aa13.41□□□□□ -0.26
PTPRU-205ENST00000460170 OR14K1Q8NGZ2 314 aa13.41□□□□□ -0.26
PTPRU-205ENST00000460170 S100PBPQ96BU1 408 aa13.41□□□□□ -0.26
PTPRU-205ENST00000460170 C8orf44Q96CB5 159 aa13.41□□□□□ -0.26
PTPRU-205ENST00000460170 IMPA2O14732 288 aa13.41□□□□□ -0.26
PTPRU-205ENST00000460170 LAP3P28838 519 aa13.41□□□□□ -0.26
PTPRU-205ENST00000460170 GZMMP51124 257 aa13.41□□□□□ -0.26
PTPRU-205ENST00000460170 MMP15P51511 669 aa13.41□□□□□ -0.26
PTPRU-205ENST00000460170 TCTN1Q2MV58 587 aa13.41□□□□□ -0.26
PTPRU-205ENST00000460170 ZNF425Q6IV72 752 aa13.41□□□□□ -0.26
PTPRU-205ENST00000460170 Q6ZS52 159 aa13.41□□□□□ -0.26
PTPRU-205ENST00000460170 CPEB2Q7Z5Q1 589 aaKnown RBP13.41□□□□□ -0.26
PTPRU-205ENST00000460170 FJX1Q86VR8 437 aa13.41□□□□□ -0.26
PTPRU-205ENST00000460170 RNF141Q8WVD5 230 aa13.41□□□□□ -0.26
PTPRU-205ENST00000460170 NMNAT2Q9BZQ4 307 aa13.41□□□□□ -0.26
PTPRU-205ENST00000460170 UBE2ZQ9H832 354 aaPredicted RBP13.41□□□□□ -0.26
PTPRU-205ENST00000460170 R4GMQ9 66 aa13.41□□□□□ -0.26
PTPRU-205ENST00000460170 METTL12A8MUP2 240 aa13.4□□□□□ -0.26
PTPRU-205ENST00000460170 ZNF133P52736 654 aaPredicted RBP13.4□□□□□ -0.26
PTPRU-205ENST00000460170 GPR85P60893 370 aa13.4□□□□□ -0.26
PTPRU-205ENST00000460170 ERVK-16P61578 105 aa13.4□□□□□ -0.26
PTPRU-205ENST00000460170 GRAMD2AQ8IUY3 354 aa13.4□□□□□ -0.26
PTPRU-205ENST00000460170 TDHQ8IZJ6 230 aa13.4□□□□□ -0.26
PTPRU-205ENST00000460170 OR9K2Q8NGE7 335 aa13.4□□□□□ -0.26
PTPRU-205ENST00000460170 FOXQ1Q9C009 403 aa13.4□□□□□ -0.26
PTPRU-205ENST00000460170 C2CD4DB7Z1M9 353 aa13.4□□□□□ -0.26
PTPRU-205ENST00000460170 B8ZZF3 427 aa13.4□□□□□ -0.26
PTPRU-205ENST00000460170 STMND1H3BQB6 276 aa13.4□□□□□ -0.26
PTPRU-205ENST00000460170 ITGB2P05107 769 aa13.4□□□□□ -0.26
PTPRU-205ENST00000460170 HOXC4P09017 264 aaPredicted RBP13.4□□□□□ -0.26
PTPRU-205ENST00000460170 RFX2P48378 723 aa13.4□□□□□ -0.26
PTPRU-205ENST00000460170 CYB561P49447 251 aa13.4□□□□□ -0.26
PTPRU-205ENST00000460170 GPNMBQ14956 572 aa13.4□□□□□ -0.26
PTPRU-205ENST00000460170 OTPQ5XKR4 325 aa13.4□□□□□ -0.26
PTPRU-205ENST00000460170 NRTNQ99748 197 aa13.4□□□□□ -0.26
PTPRU-205ENST00000460170 WWTR1Q9GZV5 400 aa13.4□□□□□ -0.26
PTPRU-205ENST00000460170 CALHM2Q9HA72 323 aa13.4□□□□□ -0.26
PTPRU-205ENST00000460170 FAM212BQ9NTI7 297 aaPredicted RBP13.4□□□□□ -0.26
PTPRU-205ENST00000460170 A0A1B0GUH1 482 aa13.4□□□□□ -0.26
PTPRU-205ENST00000460170 ZNF814B7Z6K7 855 aa13.4□□□□□ -0.26
PTPRU-205ENST00000460170 SGCEO43556 437 aa13.4□□□□□ -0.26
PTPRU-205ENST00000460170 PLPP2O43688 288 aa13.4□□□□□ -0.26
PTPRU-205ENST00000460170 F10P00742 488 aa13.4□□□□□ -0.26
PTPRU-205ENST00000460170 EBPQ15125 230 aaKnown RBP13.4□□□□□ -0.26
PTPRU-205ENST00000460170 PRICKLE4Q2TBC4 344 aa13.4□□□□□ -0.26
PTPRU-205ENST00000460170 KANSL1Q7Z3B3 1105 aa13.4□□□□□ -0.26
PTPRU-205ENST00000460170 SFTPA1Q8IWL2 248 aa13.4□□□□□ -0.26
PTPRU-205ENST00000460170 SECTM1Q8WVN6 248 aa13.4□□□□□ -0.26
PTPRU-205ENST00000460170 LIPHQ8WWY8 451 aa13.4□□□□□ -0.26
PTPRU-205ENST00000460170 SLAMF9Q96A28 289 aa13.4□□□□□ -0.26
PTPRU-205ENST00000460170 OBP2BQ9NPH6 170 aa13.4□□□□□ -0.26
PTPRU-205ENST00000460170 EXOGQ9Y2C4 368 aaKnown RBP13.4□□□□□ -0.26
PTPRU-205ENST00000460170 FFAR1O14842 300 aa13.4□□□□□ -0.26
PTPRU-205ENST00000460170 ARPC3O15145 178 aa13.4□□□□□ -0.26
PTPRU-205ENST00000460170 TGM6O95932 706 aa13.4□□□□□ -0.26
PTPRU-205ENST00000460170 IL2RGP31785 369 aa13.4□□□□□ -0.26
PTPRU-205ENST00000460170 ECI1P42126 302 aa13.4□□□□□ -0.26
PTPRU-205ENST00000460170 SMAD4Q13485 552 aaKnown RBP13.4□□□□□ -0.26
PTPRU-205ENST00000460170 AADACL4Q5VUY2 407 aa13.4□□□□□ -0.26
PTPRU-205ENST00000460170 RHOUQ7L0Q8 258 aa13.4□□□□□ -0.26
PTPRU-205ENST00000460170 WDR5BQ86VZ2 330 aa13.4□□□□□ -0.26
PTPRU-205ENST00000460170 OR8D4Q8NGM9 314 aa13.4□□□□□ -0.26
PTPRU-205ENST00000460170 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.4□□□□□ -0.26
PTPRU-205ENST00000460170 SLC22A11Q9NSA0 550 aa13.4□□□□□ -0.26
PTPRU-205ENST00000460170 CCSO14618 274 aa13.39□□□□□ -0.27
PTPRU-205ENST00000460170 RBM39Q14498 530 aaKnown RBP13.39□□□□□ -0.27
PTPRU-205ENST00000460170 C3orf49Q96BT1 292 aa13.39□□□□□ -0.27
PTPRU-205ENST00000460170 ZCCHC4Q9H5U6 513 aa13.39□□□□□ -0.27
PTPRU-205ENST00000460170 RAB9BQ9NP90 201 aa13.39□□□□□ -0.27
PTPRU-205ENST00000460170 FBXO34Q9NWN3 711 aa13.39□□□□□ -0.27
PTPRU-205ENST00000460170 PCDHGA5Q9Y5G8 931 aa13.39□□□□□ -0.27
PTPRU-205ENST00000460170 CCDC163A0A0D9SF12 145 aa13.39□□□□□ -0.27
PTPRU-205ENST00000460170 ZGLP1P0C6A0 271 aa13.39□□□□□ -0.27
PTPRU-205ENST00000460170 DCTDP32321 178 aa13.39□□□□□ -0.27
PTPRU-205ENST00000460170 SUMF2Q8NBJ7 301 aa13.39□□□□□ -0.27
PTPRU-205ENST00000460170 SEMA6DQ8NFY4 1073 aa13.39□□□□□ -0.27
PTPRU-205ENST00000460170 PELI1Q96FA3 418 aa13.39□□□□□ -0.27
PTPRU-205ENST00000460170 MMP25Q9NPA2 562 aa13.39□□□□□ -0.27
PTPRU-205ENST00000460170 BIN3Q9NQY0 253 aa13.39□□□□□ -0.27
PTPRU-205ENST00000460170 DNAJB12Q9NXW2 375 aaKnown RBP13.39□□□□□ -0.27
PTPRU-205ENST00000460170 MRPS2Q9Y399 296 aaKnown RBP13.39□□□□□ -0.27
PTPRU-205ENST00000460170 IL32P24001 234 aa13.39□□□□□ -0.27
PTPRU-205ENST00000460170 SRPXP78539 464 aa13.39□□□□□ -0.27
PTPRU-205ENST00000460170 TCTE3Q8IZS6 198 aa13.39□□□□□ -0.27
PTPRU-205ENST00000460170 KTI12Q96EK9 354 aaPredicted RBP13.39□□□□□ -0.27
PTPRU-205ENST00000460170 ZNF681Q96N22 645 aa13.39□□□□□ -0.27
PTPRU-205ENST00000460170 ABHD6Q9BV23 337 aa13.39□□□□□ -0.27
PTPRU-205ENST00000460170 KLK11Q9UBX7 282 aa13.39□□□□□ -0.27
PTPRU-205ENST00000460170 ZNF587BE7ETH6 402 aa13.39□□□□□ -0.27
PTPRU-205ENST00000460170 CD3DP04234 171 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms