RNA–Protein interactions for RNA: ENST00000460168.1

HERC4-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,215 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-207ENST00000460168 RDH10Q8IZV5 341 aa9.34□□□□□ -0.91
HERC4-207ENST00000460168 OR4Q3Q8NH05 313 aa9.34□□□□□ -0.91
HERC4-207ENST00000460168 STOML3Q8TAV4 291 aa9.34□□□□□ -0.91
HERC4-207ENST00000460168 ZNF524Q96C55 264 aa9.34□□□□□ -0.91
HERC4-207ENST00000460168 SMAD5Q99717 465 aaKnown RBP9.34□□□□□ -0.91
HERC4-207ENST00000460168 CMSS1Q9BQ75 279 aaKnown RBP9.34□□□□□ -0.91
HERC4-207ENST00000460168 TMEM43Q9BTV4 400 aa9.34□□□□□ -0.91
HERC4-207ENST00000460168 IFT27Q9BW83 186 aa9.34□□□□□ -0.91
HERC4-207ENST00000460168 UBQLN3Q9H347 655 aa9.34□□□□□ -0.91
HERC4-207ENST00000460168 HHATLQ9HCP6 504 aa9.34□□□□□ -0.91
HERC4-207ENST00000460168 PSORS1C1Q9UIG5 152 aa9.34□□□□□ -0.91
HERC4-207ENST00000460168 CNOT1A5YKK6 2376 aaKnown RBP9.34□□□□□ -0.91
HERC4-207ENST00000460168 IGKV1D-42A0A075B6H8 117 aa9.33□□□□□ -0.92
HERC4-207ENST00000460168 LOC101059948A0A1B0GTJ6 334 aa9.33□□□□□ -0.92
HERC4-207ENST00000460168 LRRN3E7EW58 273 aa9.33□□□□□ -0.92
HERC4-207ENST00000460168 SSX4O60224 188 aa9.33□□□□□ -0.92
HERC4-207ENST00000460168 FADS2O95864 444 aaKnown RBP9.33□□□□□ -0.92
HERC4-207ENST00000460168 MT-ND2P03891 347 aa9.33□□□□□ -0.92
HERC4-207ENST00000460168 FGF2P09038 288 aa9.33□□□□□ -0.92
HERC4-207ENST00000460168 CSRP1P21291 193 aaKnown RBP9.33□□□□□ -0.92
HERC4-207ENST00000460168 RBMS1P29558 406 aaKnown RBP9.33□□□□□ -0.92
HERC4-207ENST00000460168 THBS4P35443 961 aa9.33□□□□□ -0.92
HERC4-207ENST00000460168 RAB25P57735 213 aa9.33□□□□□ -0.92
HERC4-207ENST00000460168 GMFBP60983 142 aa9.33□□□□□ -0.92
HERC4-207ENST00000460168 EMX1Q04741 257 aaPredicted RBP9.33□□□□□ -0.92
HERC4-207ENST00000460168 IL10RAQ13651 578 aa9.33□□□□□ -0.92
HERC4-207ENST00000460168 EXOSC2Q13868 293 aaKnown RBP9.33□□□□□ -0.92
HERC4-207ENST00000460168 MPPED2Q15777 294 aa9.33□□□□□ -0.92
HERC4-207ENST00000460168 AKIRIN2Q53H80 203 aa9.33□□□□□ -0.92
HERC4-207ENST00000460168 HACD4Q5VWC8 232 aa9.33□□□□□ -0.92
HERC4-207ENST00000460168 THSD4Q6ZMP0 1018 aa9.33□□□□□ -0.92
HERC4-207ENST00000460168 MRGPREQ86SM8 312 aa9.33□□□□□ -0.92
HERC4-207ENST00000460168 ZNF383Q8NA42 475 aa9.33□□□□□ -0.92
HERC4-207ENST00000460168 TMEM163Q8TC26 289 aa9.33□□□□□ -0.92
HERC4-207ENST00000460168 MRGPRDQ8TDS7 321 aa9.33□□□□□ -0.92
HERC4-207ENST00000460168 GPR119Q8TDV5 335 aa9.33□□□□□ -0.92
HERC4-207ENST00000460168 TMEM234Q8WY98 164 aa9.33□□□□□ -0.92
HERC4-207ENST00000460168 GGHQ92820 318 aa9.33□□□□□ -0.92
HERC4-207ENST00000460168 FAM210BQ96KR6 192 aa9.33□□□□□ -0.92
HERC4-207ENST00000460168 TNFRSF13CQ96RJ3 184 aa9.33□□□□□ -0.92
HERC4-207ENST00000460168 ATP6V0BQ99437 205 aa9.33□□□□□ -0.92
HERC4-207ENST00000460168 GGACTQ9BVM4 153 aa9.33□□□□□ -0.92
HERC4-207ENST00000460168 PTTG3PQ9NZH4 202 aa9.33□□□□□ -0.92
HERC4-207ENST00000460168 MED11Q9P086 117 aa9.33□□□□□ -0.92
HERC4-207ENST00000460168 METTL1Q9UBP6 276 aaKnown RBP9.33□□□□□ -0.92
HERC4-207ENST00000460168 SCP2D1Q9UJQ7 156 aa9.33□□□□□ -0.92
HERC4-207ENST00000460168 OSGIN1Q9UJX0 560 aa9.33□□□□□ -0.92
HERC4-207ENST00000460168 WIF1Q9Y5W5 379 aa9.33□□□□□ -0.92
HERC4-207ENST00000460168 MRPS18BQ9Y676 258 aaKnown RBP9.33□□□□□ -0.92
HERC4-207ENST00000460168 CELSR3Q9NYQ7 3312 aa9.33□□□□□ -0.92
HERC4-207ENST00000460168 MPDZO75970 2070 aa9.33□□□□□ -0.92
HERC4-207ENST00000460168 ADAM10O14672 748 aa9.33□□□□□ -0.92
HERC4-207ENST00000460168 SURF4O15260 269 aa9.33□□□□□ -0.92
HERC4-207ENST00000460168 IFNA6P05013 189 aa9.33□□□□□ -0.92
HERC4-207ENST00000460168 CEACAM1P13688 526 aa9.33□□□□□ -0.92
HERC4-207ENST00000460168 IFNGR1P15260 489 aa9.33□□□□□ -0.92
HERC4-207ENST00000460168 C21orf33P30042 268 aaPredicted RBP9.33□□□□□ -0.92
HERC4-207ENST00000460168 DDTP30046 118 aa9.33□□□□□ -0.92
HERC4-207ENST00000460168 ETV6P41212 452 aa9.33□□□□□ -0.92
HERC4-207ENST00000460168 MAGEB1P43366 347 aa9.33□□□□□ -0.92
HERC4-207ENST00000460168 NOVA1P51513 510 aaKnown RBP9.33□□□□□ -0.92
HERC4-207ENST00000460168 POLR2HP52434 150 aaKnown RBP9.33□□□□□ -0.92
HERC4-207ENST00000460168 ST3GAL4Q11206 333 aa9.33□□□□□ -0.92
HERC4-207ENST00000460168 IRF3Q14653 427 aa9.33□□□□□ -0.92
HERC4-207ENST00000460168 P2RY14Q15391 338 aa9.33□□□□□ -0.92
HERC4-207ENST00000460168 RBMS2Q15434 407 aaKnown RBP9.33□□□□□ -0.92
HERC4-207ENST00000460168 ZNF791Q3KP31 576 aaPredicted RBP9.33□□□□□ -0.92
HERC4-207ENST00000460168 SYT14P1Q58G82 188 aa9.33□□□□□ -0.92
HERC4-207ENST00000460168 TMEM201Q5SNT2 666 aa9.33□□□□□ -0.92
HERC4-207ENST00000460168 ATPAF1Q5TC12 328 aaPredicted RBP9.33□□□□□ -0.92
HERC4-207ENST00000460168 ZNF468Q5VIY5 522 aaPredicted RBP9.33□□□□□ -0.92
HERC4-207ENST00000460168 PRAMEF20Q5VT98 475 aa9.33□□□□□ -0.92
HERC4-207ENST00000460168 GRINAQ7Z429 371 aa9.33□□□□□ -0.92
HERC4-207ENST00000460168 NRARPQ7Z6K4 114 aa9.33□□□□□ -0.92
HERC4-207ENST00000460168 GCDHQ92947 438 aaPredicted RBP9.33□□□□□ -0.92
HERC4-207ENST00000460168 RAB24Q969Q5 203 aa9.33□□□□□ -0.92
HERC4-207ENST00000460168 ENKD1Q9H0I2 346 aa9.33□□□□□ -0.92
HERC4-207ENST00000460168 NANSQ9NR45 359 aa9.33□□□□□ -0.92
HERC4-207ENST00000460168 STUB1Q9UNE7 303 aa9.33□□□□□ -0.92
HERC4-207ENST00000460168 MOKQ9UQ07 419 aa9.33□□□□□ -0.92
HERC4-207ENST00000460168 VDAC3Q9Y277 283 aa9.33□□□□□ -0.92
HERC4-207ENST00000460168 ZNF337Q9Y3M9 751 aa9.33□□□□□ -0.92
HERC4-207ENST00000460168 RPL36Q9Y3U8 105 aaKnown RBP9.33□□□□□ -0.92
HERC4-207ENST00000460168 PCNX3Q9H6A9 2034 aa9.33□□□□□ -0.92
HERC4-207ENST00000460168 ANKUB1A6NFN9 424 aa9.32□□□□□ -0.92
HERC4-207ENST00000460168 BHLHE40O14503 412 aa9.32□□□□□ -0.92
HERC4-207ENST00000460168 MRPS14O60783 128 aaKnown RBP9.32□□□□□ -0.92
HERC4-207ENST00000460168 PCMT1P22061 227 aa9.32□□□□□ -0.92
HERC4-207ENST00000460168 BDKRB2P30411 391 aa9.32□□□□□ -0.92
HERC4-207ENST00000460168 GAS1P54826 345 aa9.32□□□□□ -0.92
HERC4-207ENST00000460168 SUMO3P55854 103 aaPredicted RBP9.32□□□□□ -0.92
HERC4-207ENST00000460168 EGR4Q05215 589 aa9.32□□□□□ -0.92
HERC4-207ENST00000460168 Q0VFX4 171 aa9.32□□□□□ -0.92
HERC4-207ENST00000460168 MRPL49Q13405 166 aaKnown RBP9.32□□□□□ -0.92
HERC4-207ENST00000460168 SLC35F1Q5T1Q4 408 aa9.32□□□□□ -0.92
HERC4-207ENST00000460168 ZNF813Q6ZN06 617 aa9.32□□□□□ -0.92
HERC4-207ENST00000460168 HSD17B13Q7Z5P4 300 aaPredicted RBP9.32□□□□□ -0.92
HERC4-207ENST00000460168 GCNT2Q8N0V5 402 aa9.32□□□□□ -0.92
HERC4-207ENST00000460168 SIRT6Q8N6T7 355 aa9.32□□□□□ -0.92
HERC4-207ENST00000460168 RNF138Q8WVD3 245 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms