RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 C8orf44Q96CB5 159 aa11.15□□□□□ -0.62
LINC00959-201ENST00000456581 SLC25A36Q96CQ1 311 aa11.15□□□□□ -0.62
LINC00959-201ENST00000456581 SEC22AQ96IW7 307 aa11.15□□□□□ -0.62
LINC00959-201ENST00000456581 NPAS1Q99742 590 aa11.15□□□□□ -0.62
LINC00959-201ENST00000456581 WWTR1Q9GZV5 400 aa11.15□□□□□ -0.62
LINC00959-201ENST00000456581 POFUT1Q9H488 388 aa11.15□□□□□ -0.62
LINC00959-201ENST00000456581 GAREM1Q9H706 876 aa11.15□□□□□ -0.62
LINC00959-201ENST00000456581 EVA1AQ9H8M9 152 aa11.15□□□□□ -0.62
LINC00959-201ENST00000456581 MMP25Q9NPA2 562 aa11.15□□□□□ -0.62
LINC00959-201ENST00000456581 AKAP7Q9P0M2 348 aaPredicted RBP11.15□□□□□ -0.62
LINC00959-201ENST00000456581 SEMA5BQ9P283 1151 aa11.15□□□□□ -0.62
LINC00959-201ENST00000456581 GRHPRQ9UBQ7 328 aa11.15□□□□□ -0.62
LINC00959-201ENST00000456581 GGT3PA6NGU5 568 aa11.15□□□□□ -0.62
LINC00959-201ENST00000456581 FRG2CA6NGY1 282 aa11.15□□□□□ -0.62
LINC00959-201ENST00000456581 ARPC3O15145 178 aa11.15□□□□□ -0.62
LINC00959-201ENST00000456581 LMX1BO60663 402 aa11.15□□□□□ -0.62
LINC00959-201ENST00000456581 ALOX12BO75342 701 aa11.15□□□□□ -0.62
LINC00959-201ENST00000456581 MPZL1O95297 269 aa11.15□□□□□ -0.62
LINC00959-201ENST00000456581 CPN1P15169 458 aa11.15□□□□□ -0.62
LINC00959-201ENST00000456581 CSRP1P21291 193 aaKnown RBP11.15□□□□□ -0.62
LINC00959-201ENST00000456581 ZP3P21754 424 aa11.15□□□□□ -0.62
LINC00959-201ENST00000456581 IL12BP29460 328 aa11.15□□□□□ -0.62
LINC00959-201ENST00000456581 PLCXD2Q0VAA5 305 aa11.15□□□□□ -0.62
LINC00959-201ENST00000456581 C2orf76Q3KRA6 126 aa11.15□□□□□ -0.62
LINC00959-201ENST00000456581 ELP2Q6IA86 826 aa11.15□□□□□ -0.62
LINC00959-201ENST00000456581 WBP2NLQ6ICG8 309 aa11.15□□□□□ -0.62
LINC00959-201ENST00000456581 GSG1LQ6UXU4 331 aa11.15□□□□□ -0.62
LINC00959-201ENST00000456581 SLC16A9Q7RTY1 509 aa11.15□□□□□ -0.62
LINC00959-201ENST00000456581 GALNT16Q8N428 558 aa11.15□□□□□ -0.62
LINC00959-201ENST00000456581 OR51A2Q8NGJ7 313 aa11.15□□□□□ -0.62
LINC00959-201ENST00000456581 TAAR8Q969N4 342 aa11.15□□□□□ -0.62
LINC00959-201ENST00000456581 PNPLA2Q96AD5 504 aa11.15□□□□□ -0.62
LINC00959-201ENST00000456581 MRPS24Q96EL2 167 aaKnown RBP11.15□□□□□ -0.62
LINC00959-201ENST00000456581 RADILQ96JH8 1075 aa11.15□□□□□ -0.62
LINC00959-201ENST00000456581 TINAGL1Q9GZM7 467 aaPredicted RBP11.15□□□□□ -0.62
LINC00959-201ENST00000456581 SLITRK2Q9H156 845 aa11.15□□□□□ -0.62
LINC00959-201ENST00000456581 EXO5Q9H790 373 aa11.15□□□□□ -0.62
LINC00959-201ENST00000456581 GPN1Q9HCN4 374 aaPredicted RBP11.15□□□□□ -0.62
LINC00959-201ENST00000456581 PILRBQ9UKJ0 227 aa11.15□□□□□ -0.62
LINC00959-201ENST00000456581 FARSAQ9Y285 508 aaKnown RBP11.15□□□□□ -0.62
LINC00959-201ENST00000456581 IGHV5-10-1A0A0J9YXX1 117 aa11.14□□□□□ -0.63
LINC00959-201ENST00000456581 A0A1B0GTQ1 180 aa11.14□□□□□ -0.63
LINC00959-201ENST00000456581 NAP1L6A6NFF2 107 aa11.14□□□□□ -0.63
LINC00959-201ENST00000456581 F5H5P2 479 aa11.14□□□□□ -0.63
LINC00959-201ENST00000456581 H7C417 338 aa11.14□□□□□ -0.63
LINC00959-201ENST00000456581 CD14P08571 375 aa11.14□□□□□ -0.63
LINC00959-201ENST00000456581 GALNSP34059 522 aa11.14□□□□□ -0.63
LINC00959-201ENST00000456581 MFGE8Q08431 387 aaPredicted RBP11.14□□□□□ -0.63
LINC00959-201ENST00000456581 NKPD1Q17RQ9 610 aa11.14□□□□□ -0.63
LINC00959-201ENST00000456581 ZNF627Q7L945 461 aa11.14□□□□□ -0.63
LINC00959-201ENST00000456581 CDC20BQ86Y33 519 aa11.14□□□□□ -0.63
LINC00959-201ENST00000456581 LRRC75AQ8NAA5 344 aa11.14□□□□□ -0.63
LINC00959-201ENST00000456581 OR4S1Q8NGB4 309 aa11.14□□□□□ -0.63
LINC00959-201ENST00000456581 NKD1Q969G9 470 aa11.14□□□□□ -0.63
LINC00959-201ENST00000456581 ATG5Q9H1Y0 275 aa11.14□□□□□ -0.63
LINC00959-201ENST00000456581 MTFP1Q9UDX5 166 aa11.14□□□□□ -0.63
LINC00959-201ENST00000456581 STEAP1Q9UHE8 339 aa11.14□□□□□ -0.63
LINC00959-201ENST00000456581 KIF25Q9UIL4 384 aa11.14□□□□□ -0.63
LINC00959-201ENST00000456581 MRTO4Q9UKD2 239 aaKnown RBP11.14□□□□□ -0.63
LINC00959-201ENST00000456581 A8MXK9 166 aa11.14□□□□□ -0.63
LINC00959-201ENST00000456581 RAB40ALP0C0E4 278 aa11.14□□□□□ -0.63
LINC00959-201ENST00000456581 PPP3CBP16298 524 aa11.14□□□□□ -0.63
LINC00959-201ENST00000456581 DHODHQ02127 395 aa11.14□□□□□ -0.63
LINC00959-201ENST00000456581 IL10RAQ13651 578 aa11.14□□□□□ -0.63
LINC00959-201ENST00000456581 RBMS2Q15434 407 aaKnown RBP11.14□□□□□ -0.63
LINC00959-201ENST00000456581 NR0B2Q15466 257 aa11.14□□□□□ -0.63
LINC00959-201ENST00000456581 MOGAT2Q3SYC2 334 aa11.14□□□□□ -0.63
LINC00959-201ENST00000456581 SLC22A6Q4U2R8 563 aa11.14□□□□□ -0.63
LINC00959-201ENST00000456581 BVESQ8NE79 360 aa11.14□□□□□ -0.63
LINC00959-201ENST00000456581 OR1N1Q8NGS0 311 aa11.14□□□□□ -0.63
LINC00959-201ENST00000456581 RAB40AQ8WXH6 277 aa11.14□□□□□ -0.63
LINC00959-201ENST00000456581 DAZLQ92904 295 aaKnown RBP11.14□□□□□ -0.63
LINC00959-201ENST00000456581 MFRPQ9BY79 579 aa11.14□□□□□ -0.63
LINC00959-201ENST00000456581 ELOVL3Q9HB03 270 aa11.14□□□□□ -0.63
LINC00959-201ENST00000456581 OCIAD1Q9NX40 245 aa11.14□□□□□ -0.63
LINC00959-201ENST00000456581 FBXL3Q9UKT7 428 aa11.14□□□□□ -0.63
LINC00959-201ENST00000456581 ASPMQ8IZT6 3477 aa11.14□□□□□ -0.63
LINC00959-201ENST00000456581 EP300Q09472 2414 aaPredicted RBP11.14□□□□□ -0.63
LINC00959-201ENST00000456581 EML6Q6ZMW3 1958 aa11.14□□□□□ -0.63
LINC00959-201ENST00000456581 PRRC2CQ9Y520 2896 aaKnown RBP11.13□□□□□ -0.63
LINC00959-201ENST00000456581 TRAV14DV4A0A0A6YYC5 116 aa11.13□□□□□ -0.63
LINC00959-201ENST00000456581 TRBV5-5A0A0J9YX44 114 aa11.13□□□□□ -0.63
LINC00959-201ENST00000456581 LOC101059948A0A1B0GTJ6 334 aa11.13□□□□□ -0.63
LINC00959-201ENST00000456581 DCDC2BA2VCK2 349 aa11.13□□□□□ -0.63
LINC00959-201ENST00000456581 XRCC3O43542 346 aa11.13□□□□□ -0.63
LINC00959-201ENST00000456581 CDC40O60508 579 aaKnown RBP eCLIP11.13□□□□□ -0.63
LINC00959-201ENST00000456581 F12P00748 615 aaPredicted RBP11.13□□□□□ -0.63
LINC00959-201ENST00000456581 CALCBP10092 127 aa11.13□□□□□ -0.63
LINC00959-201ENST00000456581 ZNF28P17035 718 aa11.13□□□□□ -0.63
LINC00959-201ENST00000456581 SDHAP31040 664 aa11.13□□□□□ -0.63
LINC00959-201ENST00000456581 TMEM88Q6PEY1 159 aa11.13□□□□□ -0.63
LINC00959-201ENST00000456581 ZNF227Q86WZ6 799 aa11.13□□□□□ -0.63
LINC00959-201ENST00000456581 UBALD2Q8IYN6 164 aa11.13□□□□□ -0.63
LINC00959-201ENST00000456581 UBE2QL1A1L167 161 aa11.13□□□□□ -0.63
LINC00959-201ENST00000456581 C19orf67A6NJJ6 358 aa11.13□□□□□ -0.63
LINC00959-201ENST00000456581 TSPAN2O60636 221 aa11.13□□□□□ -0.63
LINC00959-201ENST00000456581 SCRG1O75711 98 aa11.13□□□□□ -0.63
LINC00959-201ENST00000456581 PRKACAP17612 351 aa11.13□□□□□ -0.63
LINC00959-201ENST00000456581 ALOX5APP20292 161 aa11.13□□□□□ -0.63
LINC00959-201ENST00000456581 SCGB2B2Q4G0G5 96 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms