RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 NCOR1P1Q9H4R4 102 aa4.8□□□□□ -1.64
CSMD3-204ENST00000455883 PURGQ9UJV8 347 aaKnown RBP4.8□□□□□ -1.64
CSMD3-204ENST00000455883 INSL5Q9Y5Q6 135 aa4.8□□□□□ -1.64
CSMD3-204ENST00000455883 CTDSPLO15194 276 aa4.8□□□□□ -1.64
CSMD3-204ENST00000455883 ACTL6AO96019 429 aa4.8□□□□□ -1.64
CSMD3-204ENST00000455883 PIRTP0C851 137 aa4.8□□□□□ -1.64
CSMD3-204ENST00000455883 SERPINA2P20848 420 aa4.8□□□□□ -1.64
CSMD3-204ENST00000455883 IL2RGP31785 369 aa4.8□□□□□ -1.64
CSMD3-204ENST00000455883 BTG2P78543 158 aa4.8□□□□□ -1.64
CSMD3-204ENST00000455883 AKR1C1Q04828 323 aa4.8□□□□□ -1.64
CSMD3-204ENST00000455883 CXCL9Q07325 125 aa4.8□□□□□ -1.64
CSMD3-204ENST00000455883 VAMP3Q15836 100 aa4.8□□□□□ -1.64
CSMD3-204ENST00000455883 ZNF766Q5HY98 468 aa4.8□□□□□ -1.64
CSMD3-204ENST00000455883 LRFN4Q6PJG9 635 aa4.8□□□□□ -1.64
CSMD3-204ENST00000455883 ZBTB34Q8NCN2 500 aa4.8□□□□□ -1.64
CSMD3-204ENST00000455883 SGCZQ96LD1 299 aa4.8□□□□□ -1.64
CSMD3-204ENST00000455883 FBXO34Q9NWN3 711 aa4.8□□□□□ -1.64
CSMD3-204ENST00000455883 OCIAD1Q9NX40 245 aa4.8□□□□□ -1.64
CSMD3-204ENST00000455883 OR5AC2Q9NZP5 309 aa4.8□□□□□ -1.64
CSMD3-204ENST00000455883 SLC45A2Q9UMX9 530 aa4.8□□□□□ -1.64
CSMD3-204ENST00000455883 PAPPAQ13219 1627 aa4.8□□□□□ -1.64
CSMD3-204ENST00000455883 CHEK1O14757 476 aa4.8□□□□□ -1.64
CSMD3-204ENST00000455883 DBHP09172 617 aa4.8□□□□□ -1.64
CSMD3-204ENST00000455883 MRPS34P82930 218 aaKnown RBP4.8□□□□□ -1.64
CSMD3-204ENST00000455883 KHDC3LQ587J8 217 aa4.8□□□□□ -1.64
CSMD3-204ENST00000455883 FA2HQ7L5A8 372 aa4.8□□□□□ -1.64
CSMD3-204ENST00000455883 CREB3L4Q8TEY5 395 aa4.8□□□□□ -1.64
CSMD3-204ENST00000455883 SLC17A9Q9BYT1 436 aa4.8□□□□□ -1.64
CSMD3-204ENST00000455883 NMES1Q9C002 83 aa4.8□□□□□ -1.64
CSMD3-204ENST00000455883 LPAR3Q9UBY5 353 aa4.8□□□□□ -1.64
CSMD3-204ENST00000455883 KCNK6Q9Y257 313 aa4.8□□□□□ -1.64
CSMD3-204ENST00000455883 TNKS1BP1Q9C0C2 1729 aaKnown RBP4.8□□□□□ -1.64
CSMD3-204ENST00000455883 TCF20Q9UGU0 1960 aaKnown RBP4.8□□□□□ -1.64
CSMD3-204ENST00000455883 CD8B2A6NJW9 211 aa4.8□□□□□ -1.64
CSMD3-204ENST00000455883 IFITM5A6NNB3 132 aa4.8□□□□□ -1.64
CSMD3-204ENST00000455883 DUS4LO95620 317 aaKnown RBP4.8□□□□□ -1.64
CSMD3-204ENST00000455883 CFDP00746 253 aaPredicted RBP4.8□□□□□ -1.64
CSMD3-204ENST00000455883 GAPDHP04406 335 aaKnown RBP4.8□□□□□ -1.64
CSMD3-204ENST00000455883 OR8U8P0C7N1 319 aa4.8□□□□□ -1.64
CSMD3-204ENST00000455883 CD8BP10966 210 aa4.8□□□□□ -1.64
CSMD3-204ENST00000455883 EPHA8P29322 1005 aaPredicted RBP4.8□□□□□ -1.64
CSMD3-204ENST00000455883 ARR3P36575 388 aa4.8□□□□□ -1.64
CSMD3-204ENST00000455883 LRIT3Q3SXY7 679 aa4.8□□□□□ -1.64
CSMD3-204ENST00000455883 PAPPA-AS1Q5QFB9 102 aa4.8□□□□□ -1.64
CSMD3-204ENST00000455883 TMEM65Q6PI78 240 aa4.8□□□□□ -1.64
CSMD3-204ENST00000455883 VSTM2AQ8TAG5 236 aa4.8□□□□□ -1.64
CSMD3-204ENST00000455883 MACROD1Q9BQ69 325 aa4.8□□□□□ -1.64
CSMD3-204ENST00000455883 INPP5KQ9BT40 448 aa4.8□□□□□ -1.64
CSMD3-204ENST00000455883 TMLHEQ9NVH6 421 aa4.8□□□□□ -1.64
CSMD3-204ENST00000455883 SLC5A6Q9Y289 635 aa4.8□□□□□ -1.64
CSMD3-204ENST00000455883 ZCWPW2A0A1B0GU75 182 aa4.8□□□□□ -1.64
CSMD3-204ENST00000455883 KIAA1324LA8MWY0 1029 aaPredicted RBP4.8□□□□□ -1.64
CSMD3-204ENST00000455883 TYMSP04818 313 aa4.8□□□□□ -1.64
CSMD3-204ENST00000455883 IAH1Q2TAA2 248 aaPredicted RBP4.8□□□□□ -1.64
CSMD3-204ENST00000455883 OR2A2Q6IF42 318 aa4.8□□□□□ -1.64
CSMD3-204ENST00000455883 PERPQ96FX8 193 aa4.8□□□□□ -1.64
CSMD3-204ENST00000455883 DNMT3BQ9UBC3 853 aaKnown RBP4.8□□□□□ -1.64
CSMD3-204ENST00000455883 MIOXQ9UGB7 285 aa4.8□□□□□ -1.64
CSMD3-204ENST00000455883 COL5A3P25940 1745 aaPredicted RBP4.8□□□□□ -1.64
CSMD3-204ENST00000455883 H0YIG0 161 aa4.8□□□□□ -1.64
CSMD3-204ENST00000455883 TXNL1O43396 289 aa4.8□□□□□ -1.64
CSMD3-204ENST00000455883 TBX19O60806 448 aa4.8□□□□□ -1.64
CSMD3-204ENST00000455883 NKX2-1P43699 371 aaPredicted RBP4.8□□□□□ -1.64
CSMD3-204ENST00000455883 SLC25A1P53007 311 aa4.8□□□□□ -1.64
CSMD3-204ENST00000455883 CTXN1P60606 82 aa4.8□□□□□ -1.64
CSMD3-204ENST00000455883 PAFAH1B2P68402 229 aa4.8□□□□□ -1.64
CSMD3-204ENST00000455883 TNFRSF17Q02223 184 aa4.8□□□□□ -1.64
CSMD3-204ENST00000455883 NPY5RQ15761 445 aa4.8□□□□□ -1.64
CSMD3-204ENST00000455883 XKR7Q5GH72 579 aa4.8□□□□□ -1.64
CSMD3-204ENST00000455883 COL5A1-AS1Q5SY13 56 aa4.8□□□□□ -1.64
CSMD3-204ENST00000455883 NKX2-4Q9H2Z4 354 aa4.8□□□□□ -1.64
CSMD3-204ENST00000455883 RCE1Q9Y256 329 aa4.8□□□□□ -1.64
CSMD3-204ENST00000455883 CXCL14O95715 111 aa4.79□□□□□ -1.64
CSMD3-204ENST00000455883 HAPLN1P10915 354 aaPredicted RBP4.79□□□□□ -1.64
CSMD3-204ENST00000455883 AREGP15514 252 aa4.79□□□□□ -1.64
CSMD3-204ENST00000455883 HNF1BP35680 557 aa4.79□□□□□ -1.64
CSMD3-204ENST00000455883 CSKP41240 450 aa4.79□□□□□ -1.64
CSMD3-204ENST00000455883 IL24Q13007 206 aa4.79□□□□□ -1.64
CSMD3-204ENST00000455883 ARSJQ5FYB0 599 aaPredicted RBP4.79□□□□□ -1.64
CSMD3-204ENST00000455883 CST9LP1Q5W188 147 aa4.79□□□□□ -1.64
CSMD3-204ENST00000455883 RAB37Q96AX2 223 aa4.79□□□□□ -1.64
CSMD3-204ENST00000455883 DDX4Q9NQI0 724 aaKnown RBP4.79□□□□□ -1.64
CSMD3-204ENST00000455883 ZDHHC8Q9ULC8 765 aa4.79□□□□□ -1.64
CSMD3-204ENST00000455883 SUSD5O60279 629 aa4.79□□□□□ -1.64
CSMD3-204ENST00000455883 MPIG6BO95866 241 aa4.79□□□□□ -1.64
CSMD3-204ENST00000455883 CD1AP06126 327 aa4.79□□□□□ -1.64
CSMD3-204ENST00000455883 CD37P11049 281 aa4.79□□□□□ -1.64
CSMD3-204ENST00000455883 AOAHP28039 575 aa4.79□□□□□ -1.64
CSMD3-204ENST00000455883 P2RX3P56373 397 aa4.79□□□□□ -1.64
CSMD3-204ENST00000455883 RNF4P78317 190 aa4.79□□□□□ -1.64
CSMD3-204ENST00000455883 ERHP84090 104 aaKnown RBP4.79□□□□□ -1.64
CSMD3-204ENST00000455883 DUSP5Q16690 384 aa4.79□□□□□ -1.64
CSMD3-204ENST00000455883 C1QTNF12Q5T7M4 302 aa4.79□□□□□ -1.64
CSMD3-204ENST00000455883 OR2G3Q8NGZ4 309 aa4.79□□□□□ -1.64
CSMD3-204ENST00000455883 SMIM7Q9BQ49 75 aa4.79□□□□□ -1.64
CSMD3-204ENST00000455883 SALL4Q9UJQ4 1053 aa4.79□□□□□ -1.64
CSMD3-204ENST00000455883 FBLL1A6NHQ2 334 aaKnown RBP4.79□□□□□ -1.64
CSMD3-204ENST00000455883 FABP7O15540 132 aa4.79□□□□□ -1.64
CSMD3-204ENST00000455883 HRASP01112 189 aa4.79□□□□□ -1.64
CSMD3-204ENST00000455883 SMIM17P0DL12 118 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms