RNA–Protein interactions for RNA: ENST00000454952.1

NIF3L1-209, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 719 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-209ENST00000454952 ZNF500O60304 480 aaPredicted RBP6.77□□□□□ -1.33
NIF3L1-209ENST00000454952 SLC2A10O95528 541 aa6.77□□□□□ -1.33
NIF3L1-209ENST00000454952 ABHD16AO95870 558 aa6.77□□□□□ -1.33
NIF3L1-209ENST00000454952 THY1P04216 161 aa6.77□□□□□ -1.33
NIF3L1-209ENST00000454952 TSPAN19P0C672 248 aa6.77□□□□□ -1.33
NIF3L1-209ENST00000454952 COX5BP10606 129 aa6.77□□□□□ -1.33
NIF3L1-209ENST00000454952 MSR1P21757 451 aa6.77□□□□□ -1.33
NIF3L1-209ENST00000454952 CDAP32320 146 aa6.77□□□□□ -1.33
NIF3L1-209ENST00000454952 MPV17P39210 176 aa6.77□□□□□ -1.33
NIF3L1-209ENST00000454952 MDH2P40926 338 aaKnown RBP6.77□□□□□ -1.33
NIF3L1-209ENST00000454952 AQP2P41181 271 aa6.77□□□□□ -1.33
NIF3L1-209ENST00000454952 SLC6A9P48067 706 aa6.77□□□□□ -1.33
NIF3L1-209ENST00000454952 ERVK-25P63136 954 aa6.77□□□□□ -1.33
NIF3L1-209ENST00000454952 PSG4Q00888 419 aa6.77□□□□□ -1.33
NIF3L1-209ENST00000454952 CDK5R2Q13319 367 aa6.77□□□□□ -1.33
NIF3L1-209ENST00000454952 NFYCQ13952 458 aa6.77□□□□□ -1.33
NIF3L1-209ENST00000454952 ANKDD1AQ495B1 522 aa6.77□□□□□ -1.33
NIF3L1-209ENST00000454952 PDLIM3Q53GG5 364 aaPredicted RBP6.77□□□□□ -1.33
NIF3L1-209ENST00000454952 ALG10Q5BKT4 473 aa6.77□□□□□ -1.33
NIF3L1-209ENST00000454952 SLC27A4Q6P1M0 643 aa6.77□□□□□ -1.33
NIF3L1-209ENST00000454952 LRRN1Q6UXK5 716 aa6.77□□□□□ -1.33
NIF3L1-209ENST00000454952 RFPL4BQ6ZWI9 263 aa6.77□□□□□ -1.33
NIF3L1-209ENST00000454952 CCDC80Q76M96 950 aa6.77□□□□□ -1.33
NIF3L1-209ENST00000454952 LRRC28Q86X40 367 aaPredicted RBP6.77□□□□□ -1.33
NIF3L1-209ENST00000454952 AKR7LQ8NHP1 331 aa6.77□□□□□ -1.33
NIF3L1-209ENST00000454952 TMEM239Q8WW34 195 aa6.77□□□□□ -1.33
NIF3L1-209ENST00000454952 GEMIN6Q8WXD5 167 aaKnown RBP6.77□□□□□ -1.33
NIF3L1-209ENST00000454952 NSMAFQ92636 917 aa6.77□□□□□ -1.33
NIF3L1-209ENST00000454952 NABP1Q96AH0 204 aa6.77□□□□□ -1.33
NIF3L1-209ENST00000454952 TAMM41Q96BW9 452 aa6.77□□□□□ -1.33
NIF3L1-209ENST00000454952 TLCD1Q96CP7 247 aa6.77□□□□□ -1.33
NIF3L1-209ENST00000454952 NMD3Q96D46 503 aaKnown RBP6.77□□□□□ -1.33
NIF3L1-209ENST00000454952 PLEKHA8Q96JA3 519 aa6.77□□□□□ -1.33
NIF3L1-209ENST00000454952 PRSS27Q9BQR3 290 aa6.77□□□□□ -1.33
NIF3L1-209ENST00000454952 KAT8Q9H7Z6 458 aaKnown RBP6.77□□□□□ -1.33
NIF3L1-209ENST00000454952 UNKLQ9H9P5 680 aaKnown RBP6.77□□□□□ -1.33
NIF3L1-209ENST00000454952 MEPEQ9NQ76 525 aaPredicted RBP6.77□□□□□ -1.33
NIF3L1-209ENST00000454952 TBCCD1Q9NVR7 557 aa6.77□□□□□ -1.33
NIF3L1-209ENST00000454952 IL19Q9UHD0 177 aa6.77□□□□□ -1.33
NIF3L1-209ENST00000454952 KLHL21Q9UJP4 597 aa6.77□□□□□ -1.33
NIF3L1-209ENST00000454952 PPP1R3CQ9UQK1 317 aa6.77□□□□□ -1.33
NIF3L1-209ENST00000454952 INSIG2Q9Y5U4 225 aa6.77□□□□□ -1.33
NIF3L1-209ENST00000454952 J3QW42 95 aa6.76□□□□□ -1.33
NIF3L1-209ENST00000454952 AHCYL1O43865 530 aa6.76□□□□□ -1.33
NIF3L1-209ENST00000454952 KITLGP21583 273 aa6.76□□□□□ -1.33
NIF3L1-209ENST00000454952 ZFP36P26651 326 aaKnown RBP6.76□□□□□ -1.33
NIF3L1-209ENST00000454952 LAP3P28838 519 aa6.76□□□□□ -1.33
NIF3L1-209ENST00000454952 MTPNP58546 118 aa6.76□□□□□ -1.33
NIF3L1-209ENST00000454952 BPIFB3P59826 476 aa6.76□□□□□ -1.33
NIF3L1-209ENST00000454952 RPL27P61353 136 aaKnown RBP6.76□□□□□ -1.33
NIF3L1-209ENST00000454952 SCRN3Q0VDG4 424 aa6.76□□□□□ -1.33
NIF3L1-209ENST00000454952 CYLC2Q14093 348 aaPredicted RBP6.76□□□□□ -1.33
NIF3L1-209ENST00000454952 VMACQ2NL98 169 aa6.76□□□□□ -1.33
NIF3L1-209ENST00000454952 ZNF362Q5T0B9 420 aaPredicted RBP6.76□□□□□ -1.33
NIF3L1-209ENST00000454952 LCE2CQ5TA81 110 aa6.76□□□□□ -1.33
NIF3L1-209ENST00000454952 ERICH5Q6P6B1 374 aa6.76□□□□□ -1.33
NIF3L1-209ENST00000454952 SLC25A47Q6Q0C1 308 aa6.76□□□□□ -1.33
NIF3L1-209ENST00000454952 FOXL2NBQ6ZUU3 175 aa6.76□□□□□ -1.33
NIF3L1-209ENST00000454952 C9orf139Q6ZV77 190 aa6.76□□□□□ -1.33
NIF3L1-209ENST00000454952 ZNF771Q7L3S4 317 aaPredicted RBP6.76□□□□□ -1.33
NIF3L1-209ENST00000454952 NLRC3Q7RTR2 1065 aa6.76□□□□□ -1.33
NIF3L1-209ENST00000454952 RBM45Q8IUH3 476 aaKnown RBP6.76□□□□□ -1.33
NIF3L1-209ENST00000454952 OR2Z1Q8NG97 314 aa6.76□□□□□ -1.33
NIF3L1-209ENST00000454952 OR4D11Q8NGI4 311 aa6.76□□□□□ -1.33
NIF3L1-209ENST00000454952 OR52E2Q8NGJ4 325 aa6.76□□□□□ -1.33
NIF3L1-209ENST00000454952 OR10A6Q8NH74 314 aa6.76□□□□□ -1.33
NIF3L1-209ENST00000454952 PFN4Q8NHR9 129 aa6.76□□□□□ -1.33
NIF3L1-209ENST00000454952 TMEM255BQ8WV15 326 aa6.76□□□□□ -1.33
NIF3L1-209ENST00000454952 DYDC1Q8WWB3 177 aa6.76□□□□□ -1.33
NIF3L1-209ENST00000454952 HDAC2Q92769 488 aaKnown RBP6.76□□□□□ -1.33
NIF3L1-209ENST00000454952 DCLRE1CQ96SD1 692 aaKnown RBP6.76□□□□□ -1.33
NIF3L1-209ENST00000454952 EBF4Q9BQW3 602 aa6.76□□□□□ -1.33
NIF3L1-209ENST00000454952 SIKE1Q9BRV8 207 aa6.76□□□□□ -1.33
NIF3L1-209ENST00000454952 WNT5BQ9H1J7 359 aa6.76□□□□□ -1.33
NIF3L1-209ENST00000454952 TMBIM4Q9HC24 238 aa6.76□□□□□ -1.33
NIF3L1-209ENST00000454952 MSL2Q9HCI7 577 aa6.76□□□□□ -1.33
NIF3L1-209ENST00000454952 ZNF69Q9UC07 566 aa6.76□□□□□ -1.33
NIF3L1-209ENST00000454952 MIOXQ9UGB7 285 aa6.76□□□□□ -1.33
NIF3L1-209ENST00000454952 RIMS3Q9UJD0 308 aa6.76□□□□□ -1.33
NIF3L1-209ENST00000454952 HIF3AQ9Y2N7 669 aa6.76□□□□□ -1.33
NIF3L1-209ENST00000454952 SH3GLB1Q9Y371 365 aa6.76□□□□□ -1.33
NIF3L1-209ENST00000454952 MMP24Q9Y5R2 645 aa6.76□□□□□ -1.33
NIF3L1-209ENST00000454952 A0A1W2PPL8 197 aa6.75□□□□□ -1.33
NIF3L1-209ENST00000454952 LRRC30A6NM36 301 aa6.75□□□□□ -1.33
NIF3L1-209ENST00000454952 F5H0A9 414 aaPredicted RBP6.75□□□□□ -1.33
NIF3L1-209ENST00000454952 FSTL3O95633 263 aa6.75□□□□□ -1.33
NIF3L1-209ENST00000454952 NGFP01138 241 aa6.75□□□□□ -1.33
NIF3L1-209ENST00000454952 CRYBA1P05813 215 aa6.75□□□□□ -1.33
NIF3L1-209ENST00000454952 SRP9P49458 86 aaKnown RBP6.75□□□□□ -1.33
NIF3L1-209ENST00000454952 RGS6P49758 472 aa6.75□□□□□ -1.33
NIF3L1-209ENST00000454952 DEFA6Q01524 100 aa6.75□□□□□ -1.33
NIF3L1-209ENST00000454952 GUCY1A3Q02108 690 aa6.75□□□□□ -1.33
NIF3L1-209ENST00000454952 PAX8Q06710 450 aa6.75□□□□□ -1.33
NIF3L1-209ENST00000454952 FMODQ06828 376 aa6.75□□□□□ -1.33
NIF3L1-209ENST00000454952 ST3GAL3Q11203 375 aa6.75□□□□□ -1.33
NIF3L1-209ENST00000454952 PSG7Q13046 419 aa6.75□□□□□ -1.33
NIF3L1-209ENST00000454952 TOP3AQ13472 1001 aaPredicted RBP6.75□□□□□ -1.33
NIF3L1-209ENST00000454952 SLC9A3R2Q15599 337 aa6.75□□□□□ -1.33
NIF3L1-209ENST00000454952 AGBL2Q5U5Z8 902 aa6.75□□□□□ -1.33
NIF3L1-209ENST00000454952 ZNF774Q6NX45 483 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms