RNA–Protein interactions for RNA: ENST00000454849.5

MSH2-203, Transcript of mutS homolog 2, humanhuman

TSL 4

Gene MSH2, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-203ENST00000454849 INAFM1C9JVW0 142 aa21.31■■□□□ 1
MSH2-203ENST00000454849 DOK2O60496 412 aa21.31■■□□□ 1
MSH2-203ENST00000454849 ERCC1P07992 297 aaPredicted RBP21.31■■□□□ 1
MSH2-203ENST00000454849 MPV17P39210 176 aa21.31■■□□□ 1
MSH2-203ENST00000454849 HTR5AP47898 357 aa21.31■■□□□ 1
MSH2-203ENST00000454849 KLF3P57682 345 aaPredicted RBP21.31■■□□□ 1
MSH2-203ENST00000454849 KHDRBS1Q07666 443 aaKnown RBP eCLIP21.31■■□□□ 1
MSH2-203ENST00000454849 BNIP1Q12981 228 aa21.31■■□□□ 1
MSH2-203ENST00000454849 GGTLC2Q14390 218 aa21.31■■□□□ 1
MSH2-203ENST00000454849 NKPD1Q17RQ9 610 aa21.31■■□□□ 1
MSH2-203ENST00000454849 CORO6Q6QEF8 472 aa21.31■■□□□ 1
MSH2-203ENST00000454849 RFPL4BQ6ZWI9 263 aa21.31■■□□□ 1
MSH2-203ENST00000454849 TMEM179BQ7Z7N9 219 aa21.31■■□□□ 1
MSH2-203ENST00000454849 LINC00471Q8N535 108 aa21.31■■□□□ 1
MSH2-203ENST00000454849 ABHD4Q8TB40 342 aa21.31■■□□□ 1
MSH2-203ENST00000454849 BCL2L14Q9BZR8 327 aa21.31■■□□□ 1
MSH2-203ENST00000454849 TBC1D23Q9NUY8 699 aa21.31■■□□□ 1
MSH2-203ENST00000454849 POMPQ9Y244 141 aa21.31■■□□□ 1
MSH2-203ENST00000454849 POLR1DQ9Y2S0 133 aa21.31■■□□□ 1
MSH2-203ENST00000454849 AQP12BA6NM10 295 aa21.3■■□□□ 1
MSH2-203ENST00000454849 RER1O15258 196 aa21.3■■□□□ 1
MSH2-203ENST00000454849 GSC2O15499 205 aa21.3■■□□□ 1
MSH2-203ENST00000454849 SGCEO43556 437 aa21.3■■□□□ 1
MSH2-203ENST00000454849 CSF3P09919 207 aa21.3■■□□□ 1
MSH2-203ENST00000454849 ZNF250P15622 560 aa21.3■■□□□ 1
MSH2-203ENST00000454849 SLC25A16P16260 332 aa21.3■■□□□ 1
MSH2-203ENST00000454849 VASH1Q7L8A9 365 aaPredicted RBP21.3■■□□□ 1
MSH2-203ENST00000454849 AQP12AQ8IXF9 295 aa21.3■■□□□ 1
MSH2-203ENST00000454849 OR10G2Q8NGC3 310 aa21.3■■□□□ 1
MSH2-203ENST00000454849 OR52L1Q8NGH7 329 aa21.3■■□□□ 1
MSH2-203ENST00000454849 NEU4Q8WWR8 484 aaPredicted RBP21.3■■□□□ 1
MSH2-203ENST00000454849 NIPSNAP1Q9BPW8 284 aa21.3■■□□□ 1
MSH2-203ENST00000454849 PIMREGQ9BSJ6 248 aa21.3■■□□□ 1
MSH2-203ENST00000454849 TSSK6Q9BXA6 273 aa21.3■■□□□ 1
MSH2-203ENST00000454849 ARMC1Q9NVT9 282 aa21.3■■□□□ 1
MSH2-203ENST00000454849 HIVEP2P31629 2446 aa21.3■■□□□ 1
MSH2-203ENST00000454849 BHLHE40O14503 412 aa21.29■■□□□ 1
MSH2-203ENST00000454849 GNGT2O14610 69 aa21.29■■□□□ 1
MSH2-203ENST00000454849 HPXP02790 462 aa21.29■■□□□ 1
MSH2-203ENST00000454849 GAAP10253 952 aa21.29■■□□□ 1
MSH2-203ENST00000454849 CRABP1P29762 137 aa21.29■■□□□ 1
MSH2-203ENST00000454849 PYCR1P32322 319 aa21.29■■□□□ 1
MSH2-203ENST00000454849 SELENOVP59797 346 aa21.29■■□□□ 1
MSH2-203ENST00000454849 SCRN3Q0VDG4 424 aa21.29■■□□□ 1
MSH2-203ENST00000454849 CCDC92Q53HC0 331 aaPredicted RBP21.29■■□□□ 1
MSH2-203ENST00000454849 TMEM255AQ5JRV8 349 aa21.29■■□□□ 1
MSH2-203ENST00000454849 DNM1P34Q6PK57 102 aa21.29■■□□□ 1
MSH2-203ENST00000454849 RASSF6Q6ZTQ3 369 aa21.29■■□□□ 1
MSH2-203ENST00000454849 SYT9Q86SS6 491 aa21.29■■□□□ 1
MSH2-203ENST00000454849 NPEPL1Q8NDH3 523 aa21.29■■□□□ 1
MSH2-203ENST00000454849 SLC25A40Q8TBP6 338 aa21.29■■□□□ 1
MSH2-203ENST00000454849 UBASH3BQ8TF42 649 aa21.29■■□□□ 1
MSH2-203ENST00000454849 POM121Q96HA1 1249 aa21.29■■□□□ 1
MSH2-203ENST00000454849 C4orf45Q96LM5 186 aa21.29■■□□□ 1
MSH2-203ENST00000454849 OR2J1Q9GZK6 312 aa21.29■■□□□ 1
MSH2-203ENST00000454849 PLEK2Q9NYT0 353 aa21.29■■□□□ 1
MSH2-203ENST00000454849 GRIP1Q9Y3R0 1128 aa21.29■■□□□ 1
MSH2-203ENST00000454849 IDH3BO43837 385 aa21.28■■□□□ 1
MSH2-203ENST00000454849 TFP02787 698 aa21.28■■□□□ 1
MSH2-203ENST00000454849 TP53P04637 393 aaPredicted RBP21.28■■□□□ 1
MSH2-203ENST00000454849 DBHP09172 617 aa21.28■■□□□ 1
MSH2-203ENST00000454849 USF1P22415 310 aaPredicted RBP21.28■■□□□ 1
MSH2-203ENST00000454849 NR4A2P43354 598 aa21.28■■□□□ 1
MSH2-203ENST00000454849 PPP1CBP62140 327 aa21.28■■□□□ 1
MSH2-203ENST00000454849 AQP6Q13520 282 aa21.28■■□□□ 1
MSH2-203ENST00000454849 LINC00346Q8IVM7 164 aa21.28■■□□□ 1
MSH2-203ENST00000454849 HS3ST5Q8IZT8 346 aa21.28■■□□□ 1
MSH2-203ENST00000454849 OR51L1Q8NGJ5 315 aa21.28■■□□□ 1
MSH2-203ENST00000454849 OR4Q3Q8NH05 313 aa21.28■■□□□ 1
MSH2-203ENST00000454849 GIPC3Q8TF64 312 aa21.28■■□□□ 1
MSH2-203ENST00000454849 ZNRF4Q8WWF5 429 aa21.28■■□□□ 1
MSH2-203ENST00000454849 FEVQ99581 238 aa21.28■■□□□ 1
MSH2-203ENST00000454849 MS4A5Q9H3V2 200 aa21.28■■□□□ 1
MSH2-203ENST00000454849 POFUT1Q9H488 388 aa21.28■■□□□ 1
MSH2-203ENST00000454849 YAE1D1Q9NRH1 226 aa21.28■■□□□ 1
MSH2-203ENST00000454849 IL20Q9NYY1 176 aa21.28■■□□□ 1
MSH2-203ENST00000454849 FBXO9Q9UK97 447 aaPredicted RBP21.28■■□□□ 1
MSH2-203ENST00000454849 LHFPL6Q9Y693 200 aa21.28■■□□□ 1
MSH2-203ENST00000454849 SONP18583 2426 aaKnown RBP21.28■■□□□ 1
MSH2-203ENST00000454849 IGHV4-61A0A0C4DH41 118 aa21.27■■□□□ 1
MSH2-203ENST00000454849 LOC390937A0A1W2PQ73 354 aa21.27■■□□□ 1
MSH2-203ENST00000454849 VWC2LB2RUY7 222 aa21.27■■□□□ 1
MSH2-203ENST00000454849 NCR1O76036 304 aa21.27■■□□□ 1
MSH2-203ENST00000454849 ABHD16AO95870 558 aa21.27■■□□□ 1
MSH2-203ENST00000454849 HLA-DQA2P01906 255 aa21.27■■□□□ 1
MSH2-203ENST00000454849 COL8A2P25067 703 aa21.27■■□□□ 1
MSH2-203ENST00000454849 MAGEB1P43366 347 aa21.27■■□□□ 1
MSH2-203ENST00000454849 LSM6P62312 80 aaKnown RBP21.27■■□□□ 1
MSH2-203ENST00000454849 LOXL1Q08397 574 aaPredicted RBP21.27■■□□□ 1
MSH2-203ENST00000454849 KCNMB1Q16558 191 aa21.27■■□□□ 1
MSH2-203ENST00000454849 TMEM154Q6P9G4 183 aa21.27■■□□□ 1
MSH2-203ENST00000454849 IPCEF1Q8WWN9 437 aaPredicted RBP21.27■■□□□ 1
MSH2-203ENST00000454849 POP5Q969H6 163 aaKnown RBP21.27■■□□□ 1
MSH2-203ENST00000454849 MARS2Q96GW9 593 aaKnown RBP21.27■■□□□ 1
MSH2-203ENST00000454849 DGCR6LQ9BY27 220 aa21.27■■□□□ 1
MSH2-203ENST00000454849 BPESC1Q9GZL8 116 aa21.27■■□□□ 1
MSH2-203ENST00000454849 HINT3Q9NQE9 182 aaKnown RBP21.27■■□□□ 1
MSH2-203ENST00000454849 IGLV3-9A0A075B6K5 115 aa21.26■□□□□ 0.99
MSH2-203ENST00000454849 PRKACGP22612 351 aa21.26■□□□□ 0.99
MSH2-203ENST00000454849 TEKQ02763 1124 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms