RNA–Protein interactions for RNA: ENST00000454569.5

SCN9A-205, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,585 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-205ENST00000454569 GABRG1Q8N1C3 465 aa9.63□□□□□ -0.87
SCN9A-205ENST00000454569 POMGNT2Q8NAT1 580 aa9.63□□□□□ -0.87
SCN9A-205ENST00000454569 ZNF485Q8NCK3 441 aa9.63□□□□□ -0.87
SCN9A-205ENST00000454569 FNDC8Q8TC99 324 aa9.63□□□□□ -0.87
SCN9A-205ENST00000454569 VKORC1Q9BQB6 163 aa9.63□□□□□ -0.87
SCN9A-205ENST00000454569 CDCA4Q9BXL8 241 aa9.63□□□□□ -0.87
SCN9A-205ENST00000454569 NOX3Q9HBY0 568 aa9.63□□□□□ -0.87
SCN9A-205ENST00000454569 ACOT13Q9NPJ3 140 aa9.63□□□□□ -0.87
SCN9A-205ENST00000454569 LSM2Q9Y333 95 aaKnown RBP9.63□□□□□ -0.87
SCN9A-205ENST00000454569 PCDHGB1Q9Y5G3 927 aa9.63□□□□□ -0.87
SCN9A-205ENST00000454569 FLNCQ14315 2725 aa9.62□□□□□ -0.87
SCN9A-205ENST00000454569 A0A1W2PR80 420 aa9.62□□□□□ -0.87
SCN9A-205ENST00000454569 CCDC160A6NGH7 325 aa9.62□□□□□ -0.87
SCN9A-205ENST00000454569 ZNF99A8MXY4 864 aaPredicted RBP9.62□□□□□ -0.87
SCN9A-205ENST00000454569 ZNF587BE7ETH6 402 aa9.62□□□□□ -0.87
SCN9A-205ENST00000454569 E9PI62 339 aa9.62□□□□□ -0.87
SCN9A-205ENST00000454569 LYZL6O75951 148 aa9.62□□□□□ -0.87
SCN9A-205ENST00000454569 INMTO95050 263 aa9.62□□□□□ -0.87
SCN9A-205ENST00000454569 BMP5P22003 454 aa9.62□□□□□ -0.87
SCN9A-205ENST00000454569 DCKP27707 260 aa9.62□□□□□ -0.87
SCN9A-205ENST00000454569 TTKP33981 857 aa9.62□□□□□ -0.87
SCN9A-205ENST00000454569 OR12D2P58182 307 aa9.62□□□□□ -0.87
SCN9A-205ENST00000454569 ADORA2A-AS1P86434 159 aa9.62□□□□□ -0.87
SCN9A-205ENST00000454569 RAB39AQ14964 217 aa9.62□□□□□ -0.87
SCN9A-205ENST00000454569 TP53I3Q53FA7 332 aa9.62□□□□□ -0.87
SCN9A-205ENST00000454569 HIKESHIQ53FT3 197 aa9.62□□□□□ -0.87
SCN9A-205ENST00000454569 ZNF684Q5T5D7 378 aa9.62□□□□□ -0.87
SCN9A-205ENST00000454569 SLC18B1Q6NT16 456 aa9.62□□□□□ -0.87
SCN9A-205ENST00000454569 ZNF813Q6ZN06 617 aa9.62□□□□□ -0.87
SCN9A-205ENST00000454569 DCXRQ7Z4W1 244 aa9.62□□□□□ -0.87
SCN9A-205ENST00000454569 LUZP2Q86TE4 346 aa9.62□□□□□ -0.87
SCN9A-205ENST00000454569 SLC22A24Q8N4F4 322 aa9.62□□□□□ -0.87
SCN9A-205ENST00000454569 ACBD7Q8N6N7 88 aa9.62□□□□□ -0.87
SCN9A-205ENST00000454569 NANOGP1Q8N7R0 232 aa9.62□□□□□ -0.87
SCN9A-205ENST00000454569 OTOSQ8NHW6 89 aa9.62□□□□□ -0.87
SCN9A-205ENST00000454569 ST7LQ8TDW4 575 aa9.62□□□□□ -0.87
SCN9A-205ENST00000454569 THEM6Q8WUY1 208 aa9.62□□□□□ -0.87
SCN9A-205ENST00000454569 ABHD6Q9BV23 337 aa9.62□□□□□ -0.87
SCN9A-205ENST00000454569 SLCO1C1Q9NYB5 712 aa9.62□□□□□ -0.87
SCN9A-205ENST00000454569 CYB5R1Q9UHQ9 305 aa9.62□□□□□ -0.87
SCN9A-205ENST00000454569 PROCRQ9UNN8 238 aa9.62□□□□□ -0.87
SCN9A-205ENST00000454569 CADP27708 2225 aa9.61□□□□□ -0.87
SCN9A-205ENST00000454569 FAM208BQ5VWN6 2430 aa9.61□□□□□ -0.87
SCN9A-205ENST00000454569 DAPL1A0PJW8 107 aa9.61□□□□□ -0.87
SCN9A-205ENST00000454569 IRGMA1A4Y4 181 aa9.61□□□□□ -0.87
SCN9A-205ENST00000454569 B8ZZF3 427 aa9.61□□□□□ -0.87
SCN9A-205ENST00000454569 RER1O15258 196 aa9.61□□□□□ -0.87
SCN9A-205ENST00000454569 HRGP04196 525 aa9.61□□□□□ -0.87
SCN9A-205ENST00000454569 CRHP06850 196 aa9.61□□□□□ -0.87
SCN9A-205ENST00000454569 OR2T7P0C7T2 308 aa9.61□□□□□ -0.87
SCN9A-205ENST00000454569 ZNF823P16415 610 aa9.61□□□□□ -0.87
SCN9A-205ENST00000454569 MSR1P21757 451 aa9.61□□□□□ -0.87
SCN9A-205ENST00000454569 ZNF84P51523 738 aa9.61□□□□□ -0.87
SCN9A-205ENST00000454569 EIF2B1Q14232 305 aaKnown RBP9.61□□□□□ -0.87
SCN9A-205ENST00000454569 GALEQ14376 348 aa9.61□□□□□ -0.87
SCN9A-205ENST00000454569 TBCEQ15813 527 aaPredicted RBP9.61□□□□□ -0.87
SCN9A-205ENST00000454569 TEX30Q5JUR7 227 aa9.61□□□□□ -0.87
SCN9A-205ENST00000454569 FAM27BQ5VT28 67 aa9.61□□□□□ -0.87
SCN9A-205ENST00000454569 Q6ZT83 130 aa9.61□□□□□ -0.87
SCN9A-205ENST00000454569 C22orf34Q6ZV56 151 aa9.61□□□□□ -0.87
SCN9A-205ENST00000454569 CXorf67Q86X51 503 aaPredicted RBP9.61□□□□□ -0.87
SCN9A-205ENST00000454569 ZNF433Q8N7K0 673 aaPredicted RBP9.61□□□□□ -0.87
SCN9A-205ENST00000454569 OR1K1Q8NGR3 316 aa9.61□□□□□ -0.87
SCN9A-205ENST00000454569 OR2T27Q8NH04 317 aa9.61□□□□□ -0.87
SCN9A-205ENST00000454569 SPRYD4Q8WW59 207 aaPredicted RBP9.61□□□□□ -0.87
SCN9A-205ENST00000454569 GATAD2BQ8WXI9 593 aa9.61□□□□□ -0.87
SCN9A-205ENST00000454569 FCGR1BQ92637 280 aa9.61□□□□□ -0.87
SCN9A-205ENST00000454569 RORBQ92753 470 aa9.61□□□□□ -0.87
SCN9A-205ENST00000454569 BCL2L2Q92843 193 aaPredicted RBP9.61□□□□□ -0.87
SCN9A-205ENST00000454569 MUL1Q969V5 352 aa9.61□□□□□ -0.87
SCN9A-205ENST00000454569 ALG8Q9BVK2 526 aa9.61□□□□□ -0.87
SCN9A-205ENST00000454569 JAM3Q9BX67 310 aa9.61□□□□□ -0.87
SCN9A-205ENST00000454569 YIPF3Q9GZM5 350 aa9.61□□□□□ -0.87
SCN9A-205ENST00000454569 SIAEQ9HAT2 523 aa9.61□□□□□ -0.87
SCN9A-205ENST00000454569 PNRC2Q9NPJ4 139 aaKnown RBP9.61□□□□□ -0.87
SCN9A-205ENST00000454569 B3GAT2Q9NPZ5 323 aa9.61□□□□□ -0.87
SCN9A-205ENST00000454569 ASH2LQ9UBL3 628 aa9.61□□□□□ -0.87
SCN9A-205ENST00000454569 MRM2Q9UI43 246 aaKnown RBP9.61□□□□□ -0.87
SCN9A-205ENST00000454569 SIRT4Q9Y6E7 314 aaPredicted RBP9.61□□□□□ -0.87
SCN9A-205ENST00000454569 RAD51DO75771 328 aa9.6□□□□□ -0.87
SCN9A-205ENST00000454569 AVPP01185 164 aa9.6□□□□□ -0.87
SCN9A-205ENST00000454569 HLA-HP01893 362 aa9.6□□□□□ -0.87
SCN9A-205ENST00000454569 OR8G3PP0DMU2 310 aa9.6□□□□□ -0.87
SCN9A-205ENST00000454569 CD8BP10966 210 aa9.6□□□□□ -0.87
SCN9A-205ENST00000454569 ZNF32P17041 273 aa9.6□□□□□ -0.87
SCN9A-205ENST00000454569 MPGP29372 298 aa9.6□□□□□ -0.87
SCN9A-205ENST00000454569 GP2P55259 537 aaKnown RBP9.6□□□□□ -0.87
SCN9A-205ENST00000454569 HIST1H3AP68431 136 aa9.6□□□□□ -0.87
SCN9A-205ENST00000454569 GABRA6Q16445 453 aa9.6□□□□□ -0.87
SCN9A-205ENST00000454569 RSPO1Q2MKA7 263 aaPredicted RBP9.6□□□□□ -0.87
SCN9A-205ENST00000454569 CCDC92Q53HC0 331 aaPredicted RBP9.6□□□□□ -0.87
SCN9A-205ENST00000454569 HIST2H3PS2Q5TEC6 136 aa9.6□□□□□ -0.87
SCN9A-205ENST00000454569 RNLSQ5VYX0 342 aa9.6□□□□□ -0.87
SCN9A-205ENST00000454569 LRRN1Q6UXK5 716 aa9.6□□□□□ -0.87
SCN9A-205ENST00000454569 HIST2H3AQ71DI3 136 aa9.6□□□□□ -0.87
SCN9A-205ENST00000454569 ZNF627Q7L945 461 aa9.6□□□□□ -0.87
SCN9A-205ENST00000454569 ZFP41Q8N8Y5 198 aa9.6□□□□□ -0.87
SCN9A-205ENST00000454569 OR13F1Q8NGS4 319 aa9.6□□□□□ -0.87
SCN9A-205ENST00000454569 SLC7A6Q92536 515 aa9.6□□□□□ -0.87
SCN9A-205ENST00000454569 PPP1R14AQ96A00 147 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms