RNA–Protein interactions for RNA: ENST00000453705.1

BRCC3-208, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 2,694 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-208ENST00000453705 PYCR2Q96C36 320 aa6.96□□□□□ -1.3
BRCC3-208ENST00000453705 OR2M4Q96R27 311 aa6.96□□□□□ -1.3
BRCC3-208ENST00000453705 FBXL12Q9NXK8 326 aa6.96□□□□□ -1.3
BRCC3-208ENST00000453705 UGT2A1Q9Y4X1 527 aa6.96□□□□□ -1.3
BRCC3-208ENST00000453705 TMEM82A0PJX8 343 aa6.95□□□□□ -1.3
BRCC3-208ENST00000453705 GXYLT2A0PJZ3 443 aa6.95□□□□□ -1.3
BRCC3-208ENST00000453705 TSPAN13O95857 204 aa6.95□□□□□ -1.3
BRCC3-208ENST00000453705 HOXB2P14652 356 aa6.95□□□□□ -1.3
BRCC3-208ENST00000453705 ZNF182P17025 639 aaPredicted RBP6.95□□□□□ -1.3
BRCC3-208ENST00000453705 EPHA2P29317 976 aa6.95□□□□□ -1.3
BRCC3-208ENST00000453705 RPL35P42766 123 aaKnown RBP6.95□□□□□ -1.3
BRCC3-208ENST00000453705 OR3A3P47888 321 aa6.95□□□□□ -1.3
BRCC3-208ENST00000453705 TNP2Q05952 138 aa6.95□□□□□ -1.3
BRCC3-208ENST00000453705 PRDX1Q06830 199 aaKnown RBP6.95□□□□□ -1.3
BRCC3-208ENST00000453705 MLF2Q15773 248 aaPredicted RBP6.95□□□□□ -1.3
BRCC3-208ENST00000453705 VMACQ2NL98 169 aa6.95□□□□□ -1.3
BRCC3-208ENST00000453705 CPTPQ5TA50 214 aa6.95□□□□□ -1.3
BRCC3-208ENST00000453705 FAM90A2PQ658T7 463 aa6.95□□□□□ -1.3
BRCC3-208ENST00000453705 RPTNQ6XPR3 784 aa6.95□□□□□ -1.3
BRCC3-208ENST00000453705 TMEM64Q6YI46 380 aa6.95□□□□□ -1.3
BRCC3-208ENST00000453705 COMMD6Q7Z4G1 85 aa6.95□□□□□ -1.3
BRCC3-208ENST00000453705 TMPRSS11BQ86T26 416 aa6.95□□□□□ -1.3
BRCC3-208ENST00000453705 PTOV1Q86YD1 416 aa6.95□□□□□ -1.3
BRCC3-208ENST00000453705 Q8N1Y9 231 aa6.95□□□□□ -1.3
BRCC3-208ENST00000453705 GALNT16Q8N428 558 aa6.95□□□□□ -1.3
BRCC3-208ENST00000453705 OR52N2Q8NGI0 321 aa6.95□□□□□ -1.3
BRCC3-208ENST00000453705 WDR36Q8NI36 951 aaKnown RBP6.95□□□□□ -1.3
BRCC3-208ENST00000453705 SKA2Q8WVK7 121 aaPredicted RBP6.95□□□□□ -1.3
BRCC3-208ENST00000453705 RNF133Q8WVZ7 376 aa6.95□□□□□ -1.3
BRCC3-208ENST00000453705 SLC38A2Q96QD8 506 aa6.95□□□□□ -1.3
BRCC3-208ENST00000453705 ZNF2Q9BSG1 426 aaPredicted RBP6.95□□□□□ -1.3
BRCC3-208ENST00000453705 IKZF5Q9H5V7 419 aa6.95□□□□□ -1.3
BRCC3-208ENST00000453705 MGAT4AQ9UM21 535 aa6.95□□□□□ -1.3
BRCC3-208ENST00000453705 CACNA1AO00555 2505 aa6.95□□□□□ -1.3
BRCC3-208ENST00000453705 COL5A1P20908 1838 aaPredicted RBP6.95□□□□□ -1.3
BRCC3-208ENST00000453705 CDHR4A6H8M9 788 aa6.95□□□□□ -1.3
BRCC3-208ENST00000453705 FAM25AB3EWG3 89 aa6.95□□□□□ -1.3
BRCC3-208ENST00000453705 FAM25CB3EWG5 89 aa6.95□□□□□ -1.3
BRCC3-208ENST00000453705 FAM25GB3EWG6 89 aa6.95□□□□□ -1.3
BRCC3-208ENST00000453705 SURF4O15260 269 aa6.95□□□□□ -1.3
BRCC3-208ENST00000453705 YY2O15391 372 aa6.95□□□□□ -1.3
BRCC3-208ENST00000453705 ENSAO43768 121 aaKnown RBP6.95□□□□□ -1.3
BRCC3-208ENST00000453705 KLF8O95600 359 aaPredicted RBP6.95□□□□□ -1.3
BRCC3-208ENST00000453705 ANXA3P12429 323 aa6.95□□□□□ -1.3
BRCC3-208ENST00000453705 ASCL1P50553 236 aa6.95□□□□□ -1.3
BRCC3-208ENST00000453705 IFITM3Q01628 133 aa6.95□□□□□ -1.3
BRCC3-208ENST00000453705 DNASE1L3Q13609 305 aa6.95□□□□□ -1.3
BRCC3-208ENST00000453705 RAB31Q13636 194 aa6.95□□□□□ -1.3
BRCC3-208ENST00000453705 GANABQ14697 944 aaKnown RBP6.95□□□□□ -1.3
BRCC3-208ENST00000453705 CYP51A1Q16850 503 aa6.95□□□□□ -1.3
BRCC3-208ENST00000453705 FRMPD2BQ6IN97 320 aa6.95□□□□□ -1.3
BRCC3-208ENST00000453705 CPEB2Q7Z5Q1 589 aaKnown RBP6.95□□□□□ -1.3
BRCC3-208ENST00000453705 SYS1Q8N2H4 156 aa6.95□□□□□ -1.3
BRCC3-208ENST00000453705 MFSD9Q8NBP5 474 aa6.95□□□□□ -1.3
BRCC3-208ENST00000453705 OR5AR1Q8NGP9 310 aa6.95□□□□□ -1.3
BRCC3-208ENST00000453705 OR5K1Q8NHB7 308 aa6.95□□□□□ -1.3
BRCC3-208ENST00000453705 SFXN5Q8TD22 340 aa6.95□□□□□ -1.3
BRCC3-208ENST00000453705 WDR92Q96MX6 357 aa6.95□□□□□ -1.3
BRCC3-208ENST00000453705 SLC38A3Q99624 504 aa6.95□□□□□ -1.3
BRCC3-208ENST00000453705 KRTAP3-3Q9BYR6 98 aa6.95□□□□□ -1.3
BRCC3-208ENST00000453705 KRTAP3-2Q9BYR7 98 aa6.95□□□□□ -1.3
BRCC3-208ENST00000453705 SPNS1Q9H2V7 528 aa6.95□□□□□ -1.3
BRCC3-208ENST00000453705 COA4Q9NYJ1 87 aa6.95□□□□□ -1.3
BRCC3-208ENST00000453705 ASF1AQ9Y294 204 aa6.95□□□□□ -1.3
BRCC3-208ENST00000453705 HSPE1-MOB4S4R3N1 261 aa6.95□□□□□ -1.3
BRCC3-208ENST00000453705 X6R8D5 127 aa6.95□□□□□ -1.3
BRCC3-208ENST00000453705 CEP192Q8TEP8 1941 aa6.95□□□□□ -1.3
BRCC3-208ENST00000453705 A0A0A6YYD5 115 aa6.94□□□□□ -1.3
BRCC3-208ENST00000453705 ARRDC5A6NEK1 342 aa6.94□□□□□ -1.3
BRCC3-208ENST00000453705 USP17L23D6RBM5 183 aa6.94□□□□□ -1.3
BRCC3-208ENST00000453705 NKX2-8O15522 239 aa6.94□□□□□ -1.3
BRCC3-208ENST00000453705 SLC28A2O43868 658 aa6.94□□□□□ -1.3
BRCC3-208ENST00000453705 MRPS14O60783 128 aaKnown RBP6.94□□□□□ -1.3
BRCC3-208ENST00000453705 RGS11O94810 467 aa6.94□□□□□ -1.3
BRCC3-208ENST00000453705 SYNGR4O95473 234 aa6.94□□□□□ -1.3
BRCC3-208ENST00000453705 IFNA21P01568 189 aa6.94□□□□□ -1.3
BRCC3-208ENST00000453705 PRF1P14222 555 aa6.94□□□□□ -1.3
BRCC3-208ENST00000453705 PMELP40967 661 aa6.94□□□□□ -1.3
BRCC3-208ENST00000453705 OPRL1P41146 370 aa6.94□□□□□ -1.3
BRCC3-208ENST00000453705 XKP51811 444 aa6.94□□□□□ -1.3
BRCC3-208ENST00000453705 MTPNP58546 118 aa6.94□□□□□ -1.3
BRCC3-208ENST00000453705 COPZ1P61923 177 aa6.94□□□□□ -1.3
BRCC3-208ENST00000453705 RANP62826 216 aaKnown RBP6.94□□□□□ -1.3
BRCC3-208ENST00000453705 DEFA6Q01524 100 aa6.94□□□□□ -1.3
BRCC3-208ENST00000453705 ZNF74Q16587 644 aa6.94□□□□□ -1.3
BRCC3-208ENST00000453705 MEP1AQ16819 746 aa6.94□□□□□ -1.3
BRCC3-208ENST00000453705 PLEKHN1Q494U1 663 aaPredicted RBP6.94□□□□□ -1.3
BRCC3-208ENST00000453705 TGIF2LXQ8IUE1 241 aa6.94□□□□□ -1.3
BRCC3-208ENST00000453705 SPEM1Q8N4L4 309 aa6.94□□□□□ -1.3
BRCC3-208ENST00000453705 OR2D3Q8NGH3 330 aa6.94□□□□□ -1.3
BRCC3-208ENST00000453705 OR10K1Q8NGX5 313 aa6.94□□□□□ -1.3
BRCC3-208ENST00000453705 OR2AJ1Q8NGZ0 328 aa6.94□□□□□ -1.3
BRCC3-208ENST00000453705 OR5P2Q8WZ92 322 aa6.94□□□□□ -1.3
BRCC3-208ENST00000453705 PPWD1Q96BP3 646 aaKnown RBP6.94□□□□□ -1.3
BRCC3-208ENST00000453705 C10orf35Q96D05 121 aa6.94□□□□□ -1.3
BRCC3-208ENST00000453705 MED8Q96G25 268 aa6.94□□□□□ -1.3
BRCC3-208ENST00000453705 AURKBQ96GD4 344 aaPredicted RBP6.94□□□□□ -1.3
BRCC3-208ENST00000453705 LIN37Q96GY3 246 aaPredicted RBP6.94□□□□□ -1.3
BRCC3-208ENST00000453705 PYURFQ96I23 114 aa6.94□□□□□ -1.3
BRCC3-208ENST00000453705 HRASLSQ9HDD0 168 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms