RNA–Protein interactions for RNA: ENST00000453349.5

NCKIPSD-207, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-207ENST00000453349 DOK2O60496 412 aa12.66□□□□□ -0.38
NCKIPSD-207ENST00000453349 SPARCP09486 303 aa12.66□□□□□ -0.38
NCKIPSD-207ENST00000453349 CCL2P13500 99 aa12.66□□□□□ -0.38
NCKIPSD-207ENST00000453349 CDH11P55287 796 aa12.66□□□□□ -0.38
NCKIPSD-207ENST00000453349 KRTAP10-9P60411 292 aa12.66□□□□□ -0.38
NCKIPSD-207ENST00000453349 RIPK1Q13546 671 aa12.66□□□□□ -0.38
NCKIPSD-207ENST00000453349 CCDC92Q53HC0 331 aaPredicted RBP12.66□□□□□ -0.38
NCKIPSD-207ENST00000453349 TEX30Q5JUR7 227 aa12.66□□□□□ -0.38
NCKIPSD-207ENST00000453349 LINC01590Q5TEZ4 76 aa12.66□□□□□ -0.38
NCKIPSD-207ENST00000453349 CORO6Q6QEF8 472 aa12.66□□□□□ -0.38
NCKIPSD-207ENST00000453349 MEPCEQ7L2J0 689 aaKnown RBP12.66□□□□□ -0.38
NCKIPSD-207ENST00000453349 SHFQ7M4L6 423 aa12.66□□□□□ -0.38
NCKIPSD-207ENST00000453349 ERI1Q8IV48 349 aaKnown RBP12.66□□□□□ -0.38
NCKIPSD-207ENST00000453349 LINC00346Q8IVM7 164 aa12.66□□□□□ -0.38
NCKIPSD-207ENST00000453349 GID4Q8IVV7 300 aa12.66□□□□□ -0.38
NCKIPSD-207ENST00000453349 BBS1Q8NFJ9 593 aa12.66□□□□□ -0.38
NCKIPSD-207ENST00000453349 NEUROG1Q92886 237 aa12.66□□□□□ -0.38
NCKIPSD-207ENST00000453349 ZMYND19Q96E35 227 aaPredicted RBP12.66□□□□□ -0.38
NCKIPSD-207ENST00000453349 CYB5R1Q9UHQ9 305 aa12.66□□□□□ -0.38
NCKIPSD-207ENST00000453349 LHFPL6Q9Y693 200 aa12.66□□□□□ -0.38
NCKIPSD-207ENST00000453349 COMMD3-BMI1R4GMX3 469 aa12.66□□□□□ -0.38
NCKIPSD-207ENST00000453349 UTP20O75691 2785 aaKnown RBP12.66□□□□□ -0.38
NCKIPSD-207ENST00000453349 C5orf49A4QMS7 147 aa12.65□□□□□ -0.38
NCKIPSD-207ENST00000453349 SLC22A31A6NKX4 558 aa12.65□□□□□ -0.38
NCKIPSD-207ENST00000453349 M0R129 80 aa12.65□□□□□ -0.38
NCKIPSD-207ENST00000453349 SLC16A6O15403 523 aa12.65□□□□□ -0.38
NCKIPSD-207ENST00000453349 MPZL2O60487 215 aa12.65□□□□□ -0.38
NCKIPSD-207ENST00000453349 ATP6V1G2O95670 118 aa12.65□□□□□ -0.38
NCKIPSD-207ENST00000453349 SLC2A5P22732 501 aa12.65□□□□□ -0.38
NCKIPSD-207ENST00000453349 RAD52P43351 418 aa12.65□□□□□ -0.38
NCKIPSD-207ENST00000453349 HTR5AP47898 357 aa12.65□□□□□ -0.38
NCKIPSD-207ENST00000453349 FABP6P51161 128 aa12.65□□□□□ -0.38
NCKIPSD-207ENST00000453349 HIST1H3AP68431 136 aa12.65□□□□□ -0.38
NCKIPSD-207ENST00000453349 RAB35Q15286 201 aa12.65□□□□□ -0.38
NCKIPSD-207ENST00000453349 ELFN2Q5R3F8 820 aa12.65□□□□□ -0.38
NCKIPSD-207ENST00000453349 HIST2H3PS2Q5TEC6 136 aa12.65□□□□□ -0.38
NCKIPSD-207ENST00000453349 AADACL4Q5VUY2 407 aa12.65□□□□□ -0.38
NCKIPSD-207ENST00000453349 TTC23Q5W5X9 447 aa12.65□□□□□ -0.38
NCKIPSD-207ENST00000453349 SLC18B1Q6NT16 456 aa12.65□□□□□ -0.38
NCKIPSD-207ENST00000453349 TMEM154Q6P9G4 183 aa12.65□□□□□ -0.38
NCKIPSD-207ENST00000453349 ARL9Q6T311 187 aa12.65□□□□□ -0.38
NCKIPSD-207ENST00000453349 LYPD4Q6UWN0 246 aa12.65□□□□□ -0.38
NCKIPSD-207ENST00000453349 UNQ6126/PRO20091Q6UXV3 157 aa12.65□□□□□ -0.38
NCKIPSD-207ENST00000453349 HIST2H3AQ71DI3 136 aa12.65□□□□□ -0.38
NCKIPSD-207ENST00000453349 VASH1Q7L8A9 365 aaPredicted RBP12.65□□□□□ -0.38
NCKIPSD-207ENST00000453349 BCDIN3DQ7Z5W3 292 aaKnown RBP12.65□□□□□ -0.38
NCKIPSD-207ENST00000453349 DHRSXQ8N5I4 330 aa12.65□□□□□ -0.38
NCKIPSD-207ENST00000453349 ZNF611Q8N823 705 aa12.65□□□□□ -0.38
NCKIPSD-207ENST00000453349 NUP37Q8NFH4 326 aa12.65□□□□□ -0.38
NCKIPSD-207ENST00000453349 OR6N2Q8NGY6 317 aa12.65□□□□□ -0.38
NCKIPSD-207ENST00000453349 OR1F12Q8NHA8 337 aa12.65□□□□□ -0.38
NCKIPSD-207ENST00000453349 RFKQ969G6 155 aa12.65□□□□□ -0.38
NCKIPSD-207ENST00000453349 POM121L2Q96KW2 1035 aa12.65□□□□□ -0.38
NCKIPSD-207ENST00000453349 LURAP1Q96LR2 239 aa12.65□□□□□ -0.38
NCKIPSD-207ENST00000453349 PITX2Q99697 317 aa12.65□□□□□ -0.38
NCKIPSD-207ENST00000453349 DHRS9Q9BPW9 319 aa12.65□□□□□ -0.38
NCKIPSD-207ENST00000453349 VCX3BQ9H321 246 aa12.65□□□□□ -0.38
NCKIPSD-207ENST00000453349 MARCH7Q9H992 704 aa12.65□□□□□ -0.38
NCKIPSD-207ENST00000453349 FAIMQ9NVQ4 179 aa12.65□□□□□ -0.38
NCKIPSD-207ENST00000453349 GDF2Q9UK05 429 aaPredicted RBP12.65□□□□□ -0.38
NCKIPSD-207ENST00000453349 RRP15Q9Y3B9 282 aaKnown RBP12.65□□□□□ -0.38
NCKIPSD-207ENST00000453349 LOC100509620A0A075B734 347 aa12.64□□□□□ -0.39
NCKIPSD-207ENST00000453349 E7EQL1 145 aa12.64□□□□□ -0.39
NCKIPSD-207ENST00000453349 E9PQ18 207 aa12.64□□□□□ -0.39
NCKIPSD-207ENST00000453349 SYNGR3O43761 229 aa12.64□□□□□ -0.39
NCKIPSD-207ENST00000453349 NR4A1P22736 598 aa12.64□□□□□ -0.39
NCKIPSD-207ENST00000453349 APOBEC3AP31941 199 aaPredicted RBP12.64□□□□□ -0.39
NCKIPSD-207ENST00000453349 ECH1Q13011 328 aa12.64□□□□□ -0.39
NCKIPSD-207ENST00000453349 KEAP1Q14145 624 aa12.64□□□□□ -0.39
NCKIPSD-207ENST00000453349 EIF2B1Q14232 305 aaKnown RBP12.64□□□□□ -0.39
NCKIPSD-207ENST00000453349 PCK2Q16822 640 aa12.64□□□□□ -0.39
NCKIPSD-207ENST00000453349 MEDAGQ5VYS4 303 aa12.64□□□□□ -0.39
NCKIPSD-207ENST00000453349 KRT80Q6KB66 452 aa12.64□□□□□ -0.39
NCKIPSD-207ENST00000453349 B3GLCTQ6Y288 498 aa12.64□□□□□ -0.39
NCKIPSD-207ENST00000453349 C20orf204Q6ZNR8 217 aa12.64□□□□□ -0.39
NCKIPSD-207ENST00000453349 DCXRQ7Z4W1 244 aa12.64□□□□□ -0.39
NCKIPSD-207ENST00000453349 TIGD4Q8IY51 512 aa12.64□□□□□ -0.39
NCKIPSD-207ENST00000453349 FBXL14Q8N1E6 418 aa12.64□□□□□ -0.39
NCKIPSD-207ENST00000453349 SMAP2Q8WU79 429 aaPredicted RBP12.64□□□□□ -0.39
NCKIPSD-207ENST00000453349 CYGBQ8WWM9 190 aa12.64□□□□□ -0.39
NCKIPSD-207ENST00000453349 UBE2FQ969M7 185 aa12.64□□□□□ -0.39
NCKIPSD-207ENST00000453349 APOL4Q9BPW4 351 aa12.64□□□□□ -0.39
NCKIPSD-207ENST00000453349 HDHD2Q9H0R4 259 aa12.64□□□□□ -0.39
NCKIPSD-207ENST00000453349 ELOVL3Q9HB03 270 aa12.64□□□□□ -0.39
NCKIPSD-207ENST00000453349 ATPIF1Q9UII2 106 aa12.64□□□□□ -0.39
NCKIPSD-207ENST00000453349 ALPK2Q86TB3 2170 aa12.64□□□□□ -0.39
NCKIPSD-207ENST00000453349 SPTBN1Q01082 2364 aaKnown RBP12.63□□□□□ -0.39
NCKIPSD-207ENST00000453349 OR6C6A6NF89 314 aa12.63□□□□□ -0.39
NCKIPSD-207ENST00000453349 SNTNA6NMZ2 147 aa12.63□□□□□ -0.39
NCKIPSD-207ENST00000453349 DLGAP1O14490 977 aa12.63□□□□□ -0.39
NCKIPSD-207ENST00000453349 PCSK6P29122 969 aa12.63□□□□□ -0.39
NCKIPSD-207ENST00000453349 RPS27P42677 84 aaKnown RBP12.63□□□□□ -0.39
NCKIPSD-207ENST00000453349 UCP2P55851 309 aa12.63□□□□□ -0.39
NCKIPSD-207ENST00000453349 RPS23P62266 143 aaKnown RBP12.63□□□□□ -0.39
NCKIPSD-207ENST00000453349 SNRPGP62308 76 aaKnown RBP12.63□□□□□ -0.39
NCKIPSD-207ENST00000453349 HGFACQ04756 655 aa12.63□□□□□ -0.39
NCKIPSD-207ENST00000453349 SNTB2Q13425 540 aaKnown RBP12.63□□□□□ -0.39
NCKIPSD-207ENST00000453349 TMED1Q13445 227 aa12.63□□□□□ -0.39
NCKIPSD-207ENST00000453349 TAF13Q15543 124 aa12.63□□□□□ -0.39
NCKIPSD-207ENST00000453349 SLC25A30Q5SVS4 291 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms