RNA–Protein interactions for RNA: ENST00000453285.1

SDC4P-201, Transcript of syndecan 4 pseudogene, humanhuman

BASIC

Gene SDC4P, Length 601 nt, Biotype processed pseudogene, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P-201ENST00000453285 C9orf106Q8NAJ2 232 aa5.28□□□□□ -1.56
SDC4P-201ENST00000453285 OR10H5Q8NGA6 315 aa5.28□□□□□ -1.56
SDC4P-201ENST00000453285 OR5M9Q8NGP3 310 aa5.28□□□□□ -1.56
SDC4P-201ENST00000453285 OR52N5Q8NH56 324 aa5.28□□□□□ -1.56
SDC4P-201ENST00000453285 NDNFQ8TB73 568 aa5.28□□□□□ -1.56
SDC4P-201ENST00000453285 DYNC2LI1Q8TCX1 351 aa5.28□□□□□ -1.56
SDC4P-201ENST00000453285 RNF133Q8WVZ7 376 aa5.28□□□□□ -1.56
SDC4P-201ENST00000453285 HSD17B8Q92506 261 aa5.28□□□□□ -1.56
SDC4P-201ENST00000453285 WNT2BQ93097 391 aa5.28□□□□□ -1.56
SDC4P-201ENST00000453285 TMEM203Q969S6 136 aa5.28□□□□□ -1.56
SDC4P-201ENST00000453285 SLAMF6Q96DU3 332 aa5.28□□□□□ -1.56
SDC4P-201ENST00000453285 GMPPAQ96IJ6 420 aaPredicted RBP5.28□□□□□ -1.56
SDC4P-201ENST00000453285 TRIB1Q96RU8 372 aa5.28□□□□□ -1.56
SDC4P-201ENST00000453285 MYCBPQ99417 103 aaPredicted RBP5.28□□□□□ -1.56
SDC4P-201ENST00000453285 TM9SF2Q99805 663 aa5.28□□□□□ -1.56
SDC4P-201ENST00000453285 TTYH2Q9BSA4 534 aa5.28□□□□□ -1.56
SDC4P-201ENST00000453285 ZNF416Q9BWM5 594 aa5.28□□□□□ -1.56
SDC4P-201ENST00000453285 RBM24Q9BX46 236 aaKnown RBP5.28□□□□□ -1.56
SDC4P-201ENST00000453285 SLCO5A1Q9H2Y9 848 aa5.28□□□□□ -1.56
SDC4P-201ENST00000453285 NELFAQ9H3P2 528 aa5.28□□□□□ -1.56
SDC4P-201ENST00000453285 C1orf198Q9H425 327 aa5.28□□□□□ -1.56
SDC4P-201ENST00000453285 ELOVL3Q9HB03 270 aa5.28□□□□□ -1.56
SDC4P-201ENST00000453285 CRLF2Q9HC73 371 aa5.28□□□□□ -1.56
SDC4P-201ENST00000453285 PNRC2Q9NPJ4 139 aaKnown RBP5.28□□□□□ -1.56
SDC4P-201ENST00000453285 GLRX2Q9NS18 164 aa5.28□□□□□ -1.56
SDC4P-201ENST00000453285 TMEM38BQ9NVV0 291 aa5.28□□□□□ -1.56
SDC4P-201ENST00000453285 TXNL4BQ9NX01 149 aaKnown RBP5.28□□□□□ -1.56
SDC4P-201ENST00000453285 PTTG2Q9NZH5 202 aa5.28□□□□□ -1.56
SDC4P-201ENST00000453285 EMC3Q9P0I2 261 aa5.28□□□□□ -1.56
SDC4P-201ENST00000453285 FRRS1LQ9P0K9 344 aa5.28□□□□□ -1.56
SDC4P-201ENST00000453285 PRSS50Q9UI38 385 aa5.28□□□□□ -1.56
SDC4P-201ENST00000453285 GDF2Q9UK05 429 aaPredicted RBP5.28□□□□□ -1.56
SDC4P-201ENST00000453285 LRP12Q9Y561 859 aa5.28□□□□□ -1.56
SDC4P-201ENST00000453285 KMT2BQ9UMN6 2715 aaPredicted RBP5.28□□□□□ -1.56
SDC4P-201ENST00000453285 SPTA1P02549 2419 aa5.27□□□□□ -1.57
SDC4P-201ENST00000453285 DIDO1Q9BTC0 2240 aaKnown RBP5.27□□□□□ -1.57
SDC4P-201ENST00000453285 TRBV2A0A0J9YWF9 115 aa5.27□□□□□ -1.57
SDC4P-201ENST00000453285 LOC100506127A0A0U1RQW1 187 aa5.27□□□□□ -1.57
SDC4P-201ENST00000453285 SHISA3A0PJX4 238 aa5.27□□□□□ -1.57
SDC4P-201ENST00000453285 TMEM8BA6NDV4 472 aa5.27□□□□□ -1.57
SDC4P-201ENST00000453285 MBD3L4A6NDZ8 208 aaPredicted RBP5.27□□□□□ -1.57
SDC4P-201ENST00000453285 MBD3L3A6NE82 208 aaPredicted RBP5.27□□□□□ -1.57
SDC4P-201ENST00000453285 MBD3L5A6NJ08 208 aaPredicted RBP5.27□□□□□ -1.57
SDC4P-201ENST00000453285 OR6C65A6NJZ3 312 aa5.27□□□□□ -1.57
SDC4P-201ENST00000453285 OR4C45A6NMZ5 311 aa5.27□□□□□ -1.57
SDC4P-201ENST00000453285 GABRPO00591 440 aa5.27□□□□□ -1.57
SDC4P-201ENST00000453285 RER1O15258 196 aa5.27□□□□□ -1.57
SDC4P-201ENST00000453285 NOL3O60936 208 aaKnown RBP5.27□□□□□ -1.57
SDC4P-201ENST00000453285 TMCC2O75069 709 aa5.27□□□□□ -1.57
SDC4P-201ENST00000453285 ZNF254O75437 659 aa5.27□□□□□ -1.57
SDC4P-201ENST00000453285 TOXO94900 526 aa5.27□□□□□ -1.57
SDC4P-201ENST00000453285 RPP14O95059 124 aaKnown RBP5.27□□□□□ -1.57
SDC4P-201ENST00000453285 IGHV3-9P01782 118 aa5.27□□□□□ -1.57
SDC4P-201ENST00000453285 HLA-DPB1P04440 258 aa5.27□□□□□ -1.57
SDC4P-201ENST00000453285 CST2P09228 141 aa5.27□□□□□ -1.57
SDC4P-201ENST00000453285 FCGR2AP12318 317 aa5.27□□□□□ -1.57
SDC4P-201ENST00000453285 NPR2P20594 1047 aa5.27□□□□□ -1.57
SDC4P-201ENST00000453285 CTSSP25774 331 aa5.27□□□□□ -1.57
SDC4P-201ENST00000453285 DCTDP32321 178 aa5.27□□□□□ -1.57
SDC4P-201ENST00000453285 KIR2DL2P43627 348 aaPredicted RBP5.27□□□□□ -1.57
SDC4P-201ENST00000453285 KIR3DL2P43630 455 aa5.27□□□□□ -1.57
SDC4P-201ENST00000453285 OR3A2P47893 321 aa5.27□□□□□ -1.57
SDC4P-201ENST00000453285 GDI2P50395 445 aaKnown RBP5.27□□□□□ -1.57
SDC4P-201ENST00000453285 RIDAP52758 137 aaKnown RBP5.27□□□□□ -1.57
SDC4P-201ENST00000453285 SLC3A1Q07837 685 aa5.27□□□□□ -1.57
SDC4P-201ENST00000453285 MRPL28Q13084 256 aaKnown RBP5.27□□□□□ -1.57
SDC4P-201ENST00000453285 LSAMPQ13449 338 aa5.27□□□□□ -1.57
SDC4P-201ENST00000453285 RSPO1Q2MKA7 263 aaPredicted RBP5.27□□□□□ -1.57
SDC4P-201ENST00000453285 TIMM50Q3ZCQ8 353 aa5.27□□□□□ -1.57
SDC4P-201ENST00000453285 CCDC92Q53HC0 331 aaPredicted RBP5.27□□□□□ -1.57
SDC4P-201ENST00000453285 WDR38Q5JTN6 314 aa5.27□□□□□ -1.57
SDC4P-201ENST00000453285 OR7E24Q6IFN5 339 aa5.27□□□□□ -1.57
SDC4P-201ENST00000453285 ZNF585AQ6P3V2 769 aa5.27□□□□□ -1.57
SDC4P-201ENST00000453285 FAM180AQ6UWF9 173 aa5.27□□□□□ -1.57
SDC4P-201ENST00000453285 SPATC1Q76KD6 591 aa5.27□□□□□ -1.57
SDC4P-201ENST00000453285 RHOUQ7L0Q8 258 aa5.27□□□□□ -1.57
SDC4P-201ENST00000453285 P4HA3Q7Z4N8 544 aa5.27□□□□□ -1.57
SDC4P-201ENST00000453285 KRT77Q7Z794 578 aa5.27□□□□□ -1.57
SDC4P-201ENST00000453285 CATSPERDQ86XM0 798 aa5.27□□□□□ -1.57
SDC4P-201ENST00000453285 LURAP1LQ8IV03 231 aa5.27□□□□□ -1.57
SDC4P-201ENST00000453285 MCEMP1Q8IX19 187 aa5.27□□□□□ -1.57
SDC4P-201ENST00000453285 SKA3Q8IX90 412 aa5.27□□□□□ -1.57
SDC4P-201ENST00000453285 PRSS35Q8N3Z0 413 aa5.27□□□□□ -1.57
SDC4P-201ENST00000453285 SLC22A24Q8N4F4 322 aa5.27□□□□□ -1.57
SDC4P-201ENST00000453285 IL17RDQ8NFM7 739 aa5.27□□□□□ -1.57
SDC4P-201ENST00000453285 OR13C5Q8NGS8 318 aa5.27□□□□□ -1.57
SDC4P-201ENST00000453285 OR2G2Q8NGZ5 317 aa5.27□□□□□ -1.57
SDC4P-201ENST00000453285 MBD3L2Q8NHZ7 208 aaPredicted RBP5.27□□□□□ -1.57
SDC4P-201ENST00000453285 FGFBP3Q8TAT2 258 aa5.27□□□□□ -1.57
SDC4P-201ENST00000453285 ABHD4Q8TB40 342 aa5.27□□□□□ -1.57
SDC4P-201ENST00000453285 FAM57AQ8TBR7 257 aa5.27□□□□□ -1.57
SDC4P-201ENST00000453285 HAVCR2Q8TDQ0 301 aa5.27□□□□□ -1.57
SDC4P-201ENST00000453285 RGP1Q92546 391 aaPredicted RBP5.27□□□□□ -1.57
SDC4P-201ENST00000453285 GHSRQ92847 366 aa5.27□□□□□ -1.57
SDC4P-201ENST00000453285 PPP1R14AQ96A00 147 aa5.27□□□□□ -1.57
SDC4P-201ENST00000453285 APH1AQ96BI3 265 aa5.27□□□□□ -1.57
SDC4P-201ENST00000453285 SNRNP40Q96DI7 357 aaKnown RBP5.27□□□□□ -1.57
SDC4P-201ENST00000453285 SMIM19Q96E16 107 aa5.27□□□□□ -1.57
SDC4P-201ENST00000453285 FBXO17Q96EF6 278 aa5.27□□□□□ -1.57
SDC4P-201ENST00000453285 DACH2Q96NX9 599 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms