RNA–Protein interactions for RNA: ENST00000452372.1

COL9A3-202, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-202ENST00000452372 CENPNQ96H22 339 aaPredicted RBP17.21■□□□□ 0.35
COL9A3-202ENST00000452372 RBM4Q9BWF3 364 aaKnown RBP17.21■□□□□ 0.35
COL9A3-202ENST00000452372 FN3KQ9H479 309 aa17.21■□□□□ 0.35
COL9A3-202ENST00000452372 CDH20Q9HBT6 801 aa17.21■□□□□ 0.35
COL9A3-202ENST00000452372 CMC2Q9NRP2 79 aa17.21■□□□□ 0.35
COL9A3-202ENST00000452372 DNHD1Q96M86 4753 aa17.21■□□□□ 0.35
COL9A3-202ENST00000452372 HIVEP2P31629 2446 aa17.21■□□□□ 0.35
COL9A3-202ENST00000452372 TRIM64A6NGJ6 449 aa17.2■□□□□ 0.34
COL9A3-202ENST00000452372 TRIM64BA6NI03 449 aa17.2■□□□□ 0.34
COL9A3-202ENST00000452372 GPANK1O95872 356 aa17.2■□□□□ 0.34
COL9A3-202ENST00000452372 IFNGP01579 166 aa17.2■□□□□ 0.34
COL9A3-202ENST00000452372 HEXAP06865 529 aa17.2■□□□□ 0.34
COL9A3-202ENST00000452372 BMP4P12644 408 aa17.2■□□□□ 0.34
COL9A3-202ENST00000452372 GRK5P34947 590 aa17.2■□□□□ 0.34
COL9A3-202ENST00000452372 SCRN3Q0VDG4 424 aa17.2■□□□□ 0.34
COL9A3-202ENST00000452372 AQP6Q13520 282 aa17.2■□□□□ 0.34
COL9A3-202ENST00000452372 CRMP1Q14194 572 aa17.2■□□□□ 0.34
COL9A3-202ENST00000452372 GINS1Q14691 196 aa17.2■□□□□ 0.34
COL9A3-202ENST00000452372 ACSM5Q6NUN0 579 aa17.2■□□□□ 0.34
COL9A3-202ENST00000452372 ZNF774Q6NX45 483 aa17.2■□□□□ 0.34
COL9A3-202ENST00000452372 ZFP1Q6P2D0 407 aa17.2■□□□□ 0.34
COL9A3-202ENST00000452372 SVOPLQ8N434 492 aa17.2■□□□□ 0.34
COL9A3-202ENST00000452372 PAQR4Q8N4S7 273 aaPredicted RBP17.2■□□□□ 0.34
COL9A3-202ENST00000452372 IQCF1Q8N6M8 205 aa17.2■□□□□ 0.34
COL9A3-202ENST00000452372 SLC26A10Q8NG04 563 aa17.2■□□□□ 0.34
COL9A3-202ENST00000452372 OR2T4Q8NH00 348 aa17.2■□□□□ 0.34
COL9A3-202ENST00000452372 TRMT61AQ96FX7 289 aaKnown RBP17.2■□□□□ 0.34
COL9A3-202ENST00000452372 POM121L2Q96KW2 1035 aa17.2■□□□□ 0.34
COL9A3-202ENST00000452372 NMNAT2Q9BZQ4 307 aa17.2■□□□□ 0.34
COL9A3-202ENST00000452372 PAPOLBQ9NRJ5 636 aaKnown RBP17.2■□□□□ 0.34
COL9A3-202ENST00000452372 KIF17Q9P2E2 1029 aa17.2■□□□□ 0.34
COL9A3-202ENST00000452372 LOC100509620A0A075B734 347 aa17.19■□□□□ 0.34
COL9A3-202ENST00000452372 RIIAD1A6NNX1 92 aa17.19■□□□□ 0.34
COL9A3-202ENST00000452372 FAM171A2A8MVW0 826 aa17.19■□□□□ 0.34
COL9A3-202ENST00000452372 B9A039 149 aa17.19■□□□□ 0.34
COL9A3-202ENST00000452372 TFP02787 698 aa17.19■□□□□ 0.34
COL9A3-202ENST00000452372 ZNF23P17027 643 aa17.19■□□□□ 0.34
COL9A3-202ENST00000452372 PCSK6P29122 969 aa17.19■□□□□ 0.34
COL9A3-202ENST00000452372 CDK5Q00535 292 aa17.19■□□□□ 0.34
COL9A3-202ENST00000452372 EFNB3Q15768 340 aa17.19■□□□□ 0.34
COL9A3-202ENST00000452372 OTPQ5XKR4 325 aa17.19■□□□□ 0.34
COL9A3-202ENST00000452372 PARP8Q8N3A8 854 aa17.19■□□□□ 0.34
COL9A3-202ENST00000452372 CACNG6Q9BXT2 260 aa17.19■□□□□ 0.34
COL9A3-202ENST00000452372 GABARAPL1Q9H0R8 117 aa17.19■□□□□ 0.34
COL9A3-202ENST00000452372 SEMA6AQ9H2E6 1030 aa17.19■□□□□ 0.34
COL9A3-202ENST00000452372 ASH2LQ9UBL3 628 aa17.19■□□□□ 0.34
COL9A3-202ENST00000452372 CMAHPQ9Y471 501 aa17.19■□□□□ 0.34
COL9A3-202ENST00000452372 H3BNX3 289 aa17.18■□□□□ 0.34
COL9A3-202ENST00000452372 SGCEO43556 437 aa17.18■□□□□ 0.34
COL9A3-202ENST00000452372 COX5BP10606 129 aa17.18■□□□□ 0.34
COL9A3-202ENST00000452372 ZNF3P17036 446 aa17.18■□□□□ 0.34
COL9A3-202ENST00000452372 GDI2P50395 445 aaKnown RBP17.18■□□□□ 0.34
COL9A3-202ENST00000452372 SLC25A1P53007 311 aa17.18■□□□□ 0.34
COL9A3-202ENST00000452372 ATP5J2P56134 94 aa17.18■□□□□ 0.34
COL9A3-202ENST00000452372 RPS23P62266 143 aaKnown RBP17.18■□□□□ 0.34
COL9A3-202ENST00000452372 TEKQ02763 1124 aa17.18■□□□□ 0.34
COL9A3-202ENST00000452372 MEP1BQ16820 701 aa17.18■□□□□ 0.34
COL9A3-202ENST00000452372 PROKR2Q8NFJ6 384 aa17.18■□□□□ 0.34
COL9A3-202ENST00000452372 ZNRF4Q8WWF5 429 aa17.18■□□□□ 0.34
COL9A3-202ENST00000452372 LHFPL6Q9Y693 200 aa17.18■□□□□ 0.34
COL9A3-202ENST00000452372 PMF1-BGLAPU3KQ54 211 aa17.18■□□□□ 0.34
COL9A3-202ENST00000452372 SONP18583 2426 aaKnown RBP17.18■□□□□ 0.34
COL9A3-202ENST00000452372 C5orf49A4QMS7 147 aa17.17■□□□□ 0.34
COL9A3-202ENST00000452372 GPRIN2O60269 458 aa17.17■□□□□ 0.34
COL9A3-202ENST00000452372 HLA-DQA2P01906 255 aa17.17■□□□□ 0.34
COL9A3-202ENST00000452372 HMGN1P05114 100 aa17.17■□□□□ 0.34
COL9A3-202ENST00000452372 CCNOP22674 350 aa17.17■□□□□ 0.34
COL9A3-202ENST00000452372 PYCR1P32322 319 aa17.17■□□□□ 0.34
COL9A3-202ENST00000452372 RAD52P43351 418 aa17.17■□□□□ 0.34
COL9A3-202ENST00000452372 CRISP1P54107 249 aa17.17■□□□□ 0.34
COL9A3-202ENST00000452372 UCP2P55851 309 aa17.17■□□□□ 0.34
COL9A3-202ENST00000452372 ESRRGP62508 458 aa17.17■□□□□ 0.34
COL9A3-202ENST00000452372 HIST1H3AP68431 136 aa17.17■□□□□ 0.34
COL9A3-202ENST00000452372 HIST2H3PS2Q5TEC6 136 aa17.17■□□□□ 0.34
COL9A3-202ENST00000452372 KDM4DQ6B0I6 523 aa17.17■□□□□ 0.34
COL9A3-202ENST00000452372 HIST2H3AQ71DI3 136 aa17.17■□□□□ 0.34
COL9A3-202ENST00000452372 VASH1Q7L8A9 365 aaPredicted RBP17.17■□□□□ 0.34
COL9A3-202ENST00000452372 ZSCAN2Q7Z7L9 614 aaPredicted RBP17.17■□□□□ 0.34
COL9A3-202ENST00000452372 GJC3Q8NFK1 279 aa17.17■□□□□ 0.34
COL9A3-202ENST00000452372 OR10H5Q8NGA6 315 aa17.17■□□□□ 0.34
COL9A3-202ENST00000452372 OR9Q1Q8NGQ5 310 aa17.17■□□□□ 0.34
COL9A3-202ENST00000452372 PKP2Q99959 881 aa17.17■□□□□ 0.34
COL9A3-202ENST00000452372 PLK3Q9H4B4 646 aa17.17■□□□□ 0.34
COL9A3-202ENST00000452372 SLC25A19Q9HC21 320 aa17.17■□□□□ 0.34
COL9A3-202ENST00000452372 KRT84Q9NSB2 600 aa17.17■□□□□ 0.34
COL9A3-202ENST00000452372 MRPL22Q9NWU5 206 aaKnown RBP17.17■□□□□ 0.34
COL9A3-202ENST00000452372 NDRG4Q9ULP0 352 aaKnown RBP17.17■□□□□ 0.34
COL9A3-202ENST00000452372 POLR1DQ9Y2S0 133 aa17.17■□□□□ 0.34
COL9A3-202ENST00000452372 TMEM129A0AVI4 362 aa17.16■□□□□ 0.34
COL9A3-202ENST00000452372 H7C417 338 aa17.16■□□□□ 0.34
COL9A3-202ENST00000452372 SMAD7O15105 426 aaKnown RBP17.16■□□□□ 0.34
COL9A3-202ENST00000452372 DOK2O60496 412 aa17.16■□□□□ 0.34
COL9A3-202ENST00000452372 FAM157BP0CG42 384 aa17.16■□□□□ 0.34
COL9A3-202ENST00000452372 SPI1P17947 270 aa17.16■□□□□ 0.34
COL9A3-202ENST00000452372 EVX1P49640 407 aa17.16■□□□□ 0.34
COL9A3-202ENST00000452372 SNRPD2P62316 118 aaKnown RBP17.16■□□□□ 0.34
COL9A3-202ENST00000452372 MSMPQ1L6U9 139 aa17.16■□□□□ 0.34
COL9A3-202ENST00000452372 CCDC92Q53HC0 331 aaPredicted RBP17.16■□□□□ 0.34
COL9A3-202ENST00000452372 OR51L1Q8NGJ5 315 aa17.16■□□□□ 0.34
COL9A3-202ENST00000452372 PTP4A1Q93096 173 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms