RNA–Protein interactions for RNA: ENST00000450940.5

USP40-207, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 670 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-207ENST00000450940 IMPA2O14732 288 aa16.52■□□□□ 0.24
USP40-207ENST00000450940 SLC16A7O60669 478 aa16.52■□□□□ 0.24
USP40-207ENST00000450940 TUBG1P23258 451 aa16.52■□□□□ 0.24
USP40-207ENST00000450940 GCH1P30793 250 aa16.52■□□□□ 0.24
USP40-207ENST00000450940 LIPAP38571 399 aa16.52■□□□□ 0.24
USP40-207ENST00000450940 CDKN2AP42771 156 aaKnown RBP16.52■□□□□ 0.24
USP40-207ENST00000450940 RPS6KA3P51812 740 aa16.52■□□□□ 0.24
USP40-207ENST00000450940 PPP1CBP62140 327 aa16.52■□□□□ 0.24
USP40-207ENST00000450940 SPATA46Q5T0L3 261 aa16.52■□□□□ 0.24
USP40-207ENST00000450940 ARL9Q6T311 187 aa16.52■□□□□ 0.24
USP40-207ENST00000450940 PTCHD4Q6ZW05 846 aa16.52■□□□□ 0.24
USP40-207ENST00000450940 GLB1L2Q8IW92 636 aa16.52■□□□□ 0.24
USP40-207ENST00000450940 DEFB107AQ8IZN7 70 aa16.52■□□□□ 0.24
USP40-207ENST00000450940 CLDND2Q8NHS1 167 aa16.52■□□□□ 0.24
USP40-207ENST00000450940 IPCEF1Q8WWN9 437 aaPredicted RBP16.52■□□□□ 0.24
USP40-207ENST00000450940 GTF3AQ92664 365 aaKnown RBP16.52■□□□□ 0.24
USP40-207ENST00000450940 TUBG2Q9NRH3 451 aa16.52■□□□□ 0.24
USP40-207ENST00000450940 TBCCD1Q9NVR7 557 aa16.52■□□□□ 0.24
USP40-207ENST00000450940 IL20RAQ9UHF4 553 aa16.52■□□□□ 0.24
USP40-207ENST00000450940 COA3Q9Y2R0 106 aaPredicted RBP16.52■□□□□ 0.24
USP40-207ENST00000450940 V9GYQ6 96 aa16.52■□□□□ 0.24
USP40-207ENST00000450940 SVEP1Q4LDE5 3571 aa16.52■□□□□ 0.24
USP40-207ENST00000450940 SOCS2O14508 198 aa16.51■□□□□ 0.23
USP40-207ENST00000450940 ARPC3O15145 178 aa16.51■□□□□ 0.23
USP40-207ENST00000450940 FABP3P05413 133 aa16.51■□□□□ 0.23
USP40-207ENST00000450940 FPR3P25089 353 aa16.51■□□□□ 0.23
USP40-207ENST00000450940 GSSP48637 474 aa16.51■□□□□ 0.23
USP40-207ENST00000450940 ZNF81P51508 661 aa16.51■□□□□ 0.23
USP40-207ENST00000450940 MNAT1P51948 309 aa16.51■□□□□ 0.23
USP40-207ENST00000450940 DVL1P1P54792 670 aaPredicted RBP16.51■□□□□ 0.23
USP40-207ENST00000450940 LMO4P61968 165 aa16.51■□□□□ 0.23
USP40-207ENST00000450940 SPIBQ01892 262 aa16.51■□□□□ 0.23
USP40-207ENST00000450940 TEKQ02763 1124 aa16.51■□□□□ 0.23
USP40-207ENST00000450940 AQP6Q13520 282 aa16.51■□□□□ 0.23
USP40-207ENST00000450940 CR1LQ2VPA4 569 aa16.51■□□□□ 0.23
USP40-207ENST00000450940 RFX4Q33E94 735 aa16.51■□□□□ 0.23
USP40-207ENST00000450940 FAM209AQ5JX71 171 aa16.51■□□□□ 0.23
USP40-207ENST00000450940 VASH1Q7L8A9 365 aaPredicted RBP16.51■□□□□ 0.23
USP40-207ENST00000450940 ABHD4Q8TB40 342 aa16.51■□□□□ 0.23
USP40-207ENST00000450940 MCUR1Q96AQ8 359 aa16.51■□□□□ 0.23
USP40-207ENST00000450940 NUAK2Q9H093 628 aa16.51■□□□□ 0.23
USP40-207ENST00000450940 CYSLTR2Q9NS75 346 aa16.51■□□□□ 0.23
USP40-207ENST00000450940 CGGBP1Q9UFW8 167 aaPredicted RBP16.51■□□□□ 0.23
USP40-207ENST00000450940 TANC2Q9HCD6 1990 aa16.51■□□□□ 0.23
USP40-207ENST00000450940 B4DSR2 109 aa16.5■□□□□ 0.23
USP40-207ENST00000450940 WNT9BO14905 357 aa16.5■□□□□ 0.23
USP40-207ENST00000450940 PPIHO43447 177 aaKnown RBP16.5■□□□□ 0.23
USP40-207ENST00000450940 SGCEO43556 437 aa16.5■□□□□ 0.23
USP40-207ENST00000450940 MPZL1O95297 269 aa16.5■□□□□ 0.23
USP40-207ENST00000450940 IGHV1-46P01743 117 aa16.5■□□□□ 0.23
USP40-207ENST00000450940 TFP02787 698 aa16.5■□□□□ 0.23
USP40-207ENST00000450940 SRD5A1P18405 259 aa16.5■□□□□ 0.23
USP40-207ENST00000450940 HNF1AP20823 631 aa16.5■□□□□ 0.23
USP40-207ENST00000450940 ARHGDIAP52565 204 aa16.5■□□□□ 0.23
USP40-207ENST00000450940 HMGA2P52926 109 aa16.5■□□□□ 0.23
USP40-207ENST00000450940 GLO1Q04760 184 aa16.5■□□□□ 0.23
USP40-207ENST00000450940 CCNIQ14094 377 aa16.5■□□□□ 0.23
USP40-207ENST00000450940 C1orf94Q6P1W5 598 aa16.5■□□□□ 0.23
USP40-207ENST00000450940 FITM2Q8N6M3 262 aa16.5■□□□□ 0.23
USP40-207ENST00000450940 OR52D1Q9H346 318 aa16.5■□□□□ 0.23
USP40-207ENST00000450940 IGHV1-69-2A0A0G2JMI3 117 aa16.49■□□□□ 0.23
USP40-207ENST00000450940 OR6C6A6NF89 314 aa16.49■□□□□ 0.23
USP40-207ENST00000450940 ZSCAN5BA6NJL1 495 aa16.49■□□□□ 0.23
USP40-207ENST00000450940 DOK2O60496 412 aa16.49■□□□□ 0.23
USP40-207ENST00000450940 CRABP1P29762 137 aa16.49■□□□□ 0.23
USP40-207ENST00000450940 RRM2P31350 389 aa16.49■□□□□ 0.23
USP40-207ENST00000450940 SLC6A6P31641 620 aa16.49■□□□□ 0.23
USP40-207ENST00000450940 IFNGR2P38484 337 aa16.49■□□□□ 0.23
USP40-207ENST00000450940 HIST1H3AP68431 136 aa16.49■□□□□ 0.23
USP40-207ENST00000450940 HIST2H3PS2Q5TEC6 136 aa16.49■□□□□ 0.23
USP40-207ENST00000450940 HIST2H3AQ71DI3 136 aa16.49■□□□□ 0.23
USP40-207ENST00000450940 ZDHHC21Q8IVQ6 265 aa16.49■□□□□ 0.23
USP40-207ENST00000450940 NPEPL1Q8NDH3 523 aa16.49■□□□□ 0.23
USP40-207ENST00000450940 ERMAPQ96PL5 475 aaPredicted RBP16.49■□□□□ 0.23
USP40-207ENST00000450940 CCT8L2Q96SF2 557 aa16.49■□□□□ 0.23
USP40-207ENST00000450940 DECR2Q9NUI1 292 aa16.49■□□□□ 0.23
USP40-207ENST00000450940 ACTR3BQ9P1U1 418 aa16.49■□□□□ 0.23
USP40-207ENST00000450940 ATPIF1Q9UII2 106 aa16.49■□□□□ 0.23
USP40-207ENST00000450940 TMEFF2Q9UIK5 374 aaPredicted RBP16.49■□□□□ 0.23
USP40-207ENST00000450940 ZDHHC8Q9ULC8 765 aa16.49■□□□□ 0.23
USP40-207ENST00000450940 IGLV1-36A0A0B4J1U3 117 aa16.48■□□□□ 0.23
USP40-207ENST00000450940 PLSCR5A0PG75 271 aa16.48■□□□□ 0.23
USP40-207ENST00000450940 DCTN6O00399 190 aa16.48■□□□□ 0.23
USP40-207ENST00000450940 OR10H3O60404 316 aa16.48■□□□□ 0.23
USP40-207ENST00000450940 CDC14BO60729 498 aa16.48■□□□□ 0.23
USP40-207ENST00000450940 KRT36O76013 467 aa16.48■□□□□ 0.23
USP40-207ENST00000450940 PPP1R3DO95685 299 aa16.48■□□□□ 0.23
USP40-207ENST00000450940 ABHD16AO95870 558 aa16.48■□□□□ 0.23
USP40-207ENST00000450940 CD55P08174 381 aa16.48■□□□□ 0.23
USP40-207ENST00000450940 GAAP10253 952 aa16.48■□□□□ 0.23
USP40-207ENST00000450940 HTR5AP47898 357 aa16.48■□□□□ 0.23
USP40-207ENST00000450940 TSPAN31Q12999 210 aa16.48■□□□□ 0.23
USP40-207ENST00000450940 PSG7Q13046 419 aa16.48■□□□□ 0.23
USP40-207ENST00000450940 TSTQ16762 297 aaKnown RBP16.48■□□□□ 0.23
USP40-207ENST00000450940 CCDC92Q53HC0 331 aaPredicted RBP16.48■□□□□ 0.23
USP40-207ENST00000450940 PGM2L1Q6PCE3 622 aa16.48■□□□□ 0.23
USP40-207ENST00000450940 IL17RELQ6ZVW7 336 aa16.48■□□□□ 0.23
USP40-207ENST00000450940 USP51Q70EK9 711 aa16.48■□□□□ 0.23
USP40-207ENST00000450940 ARHGAP24Q8N264 748 aa16.48■□□□□ 0.23
USP40-207ENST00000450940 FANK1Q8TC84 345 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms