RNA–Protein interactions for RNA: ENST00000449264.2

TNF-208, Transcript of tumor necrosis factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNF, Length 1,676 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNF-208ENST00000449264 JAM3Q9BX67 310 aa12.82□□□□□ -0.36
TNF-208ENST00000449264 KCNN2Q9H2S1 579 aa12.82□□□□□ -0.36
TNF-208ENST00000449264 COQ3Q9NZJ6 369 aa12.82□□□□□ -0.36
TNF-208ENST00000449264 MYO18BQ8IUG5 2567 aa12.82□□□□□ -0.36
TNF-208ENST00000449264 FAM90A27PA6NNH2 459 aa12.81□□□□□ -0.36
TNF-208ENST00000449264 A8MXE2 369 aa12.81□□□□□ -0.36
TNF-208ENST00000449264 PHYHO14832 338 aa12.81□□□□□ -0.36
TNF-208ENST00000449264 HLA-HP01893 362 aa12.81□□□□□ -0.36
TNF-208ENST00000449264 EMX1Q04741 257 aaPredicted RBP12.81□□□□□ -0.36
TNF-208ENST00000449264 GALEQ14376 348 aa12.81□□□□□ -0.36
TNF-208ENST00000449264 P2RY6Q15077 328 aa12.81□□□□□ -0.36
TNF-208ENST00000449264 MED22Q15528 200 aa12.81□□□□□ -0.36
TNF-208ENST00000449264 TBCEQ15813 527 aaPredicted RBP12.81□□□□□ -0.36
TNF-208ENST00000449264 TBRG1Q3YBR2 411 aa12.81□□□□□ -0.36
TNF-208ENST00000449264 NRN1LQ496H8 165 aa12.81□□□□□ -0.36
TNF-208ENST00000449264 TP53I3Q53FA7 332 aa12.81□□□□□ -0.36
TNF-208ENST00000449264 LRRN1Q6UXK5 716 aa12.81□□□□□ -0.36
TNF-208ENST00000449264 ZNF627Q7L945 461 aa12.81□□□□□ -0.36
TNF-208ENST00000449264 FGFBP3Q8TAT2 258 aa12.81□□□□□ -0.36
TNF-208ENST00000449264 ST7LQ8TDW4 575 aa12.81□□□□□ -0.36
TNF-208ENST00000449264 ZNF649Q9BS31 505 aa12.81□□□□□ -0.36
TNF-208ENST00000449264 C1orf198Q9H425 327 aa12.81□□□□□ -0.36
TNF-208ENST00000449264 VCX3AQ9NNX9 186 aa12.81□□□□□ -0.36
TNF-208ENST00000449264 ACOT13Q9NPJ3 140 aa12.81□□□□□ -0.36
TNF-208ENST00000449264 GALNT8Q9NY28 637 aa12.81□□□□□ -0.36
TNF-208ENST00000449264 GNG8Q9UK08 70 aa12.81□□□□□ -0.36
TNF-208ENST00000449264 A0A1W2PR80 420 aa12.8□□□□□ -0.36
TNF-208ENST00000449264 TMEM129A0AVI4 362 aa12.8□□□□□ -0.36
TNF-208ENST00000449264 J3QLW9 94 aa12.8□□□□□ -0.36
TNF-208ENST00000449264 CLPTM1O96005 669 aa12.8□□□□□ -0.36
TNF-208ENST00000449264 LCKP06239 509 aa12.8□□□□□ -0.36
TNF-208ENST00000449264 CD79AP11912 226 aa12.8□□□□□ -0.36
TNF-208ENST00000449264 ZNF19P17023 458 aa12.8□□□□□ -0.36
TNF-208ENST00000449264 ZNF32P17041 273 aa12.8□□□□□ -0.36
TNF-208ENST00000449264 PCMT1P22061 227 aa12.8□□□□□ -0.36
TNF-208ENST00000449264 IL32P24001 234 aa12.8□□□□□ -0.36
TNF-208ENST00000449264 CHRNB4P30926 498 aa12.8□□□□□ -0.36
TNF-208ENST00000449264 HOXC12P31275 282 aa12.8□□□□□ -0.36
TNF-208ENST00000449264 ACTA2P62736 377 aa12.8□□□□□ -0.36
TNF-208ENST00000449264 ACTG2P63267 376 aa12.8□□□□□ -0.36
TNF-208ENST00000449264 SLC36A2Q495M3 483 aa12.8□□□□□ -0.36
TNF-208ENST00000449264 C4orf17Q53FE4 359 aa12.8□□□□□ -0.36
TNF-208ENST00000449264 TMPRSS11AQ6ZMR5 421 aa12.8□□□□□ -0.36
TNF-208ENST00000449264 PLEKHG7Q6ZR37 379 aa12.8□□□□□ -0.36
TNF-208ENST00000449264 BHLHA15Q7RTS1 189 aaPredicted RBP12.8□□□□□ -0.36
TNF-208ENST00000449264 NANOGP1Q8N7R0 232 aa12.8□□□□□ -0.36
TNF-208ENST00000449264 SPRYD4Q8WW59 207 aaPredicted RBP12.8□□□□□ -0.36
TNF-208ENST00000449264 GATAD2BQ8WXI9 593 aa12.8□□□□□ -0.36
TNF-208ENST00000449264 ASB17Q8WXJ9 295 aa12.8□□□□□ -0.36
TNF-208ENST00000449264 BCL2L2Q92843 193 aaPredicted RBP12.8□□□□□ -0.36
TNF-208ENST00000449264 SLAMF6Q96DU3 332 aa12.8□□□□□ -0.36
TNF-208ENST00000449264 C4orf36Q96KX1 117 aa12.8□□□□□ -0.36
TNF-208ENST00000449264 OR5M11Q96RB7 305 aa12.8□□□□□ -0.36
TNF-208ENST00000449264 RNF121Q9H920 327 aa12.8□□□□□ -0.36
TNF-208ENST00000449264 ISG20L2Q9H9L3 353 aaKnown RBP12.8□□□□□ -0.36
TNF-208ENST00000449264 CENPMQ9NSP4 180 aa12.8□□□□□ -0.36
TNF-208ENST00000449264 ZNF224Q9NZL3 707 aa12.8□□□□□ -0.36
TNF-208ENST00000449264 ZNF503-AS2A6NEH8 195 aa12.8□□□□□ -0.36
TNF-208ENST00000449264 KRT8P05787 483 aa12.8□□□□□ -0.36
TNF-208ENST00000449264 WNT4P56705 351 aa12.8□□□□□ -0.36
TNF-208ENST00000449264 OR12D2P58182 307 aa12.8□□□□□ -0.36
TNF-208ENST00000449264 UBE2NP61088 152 aaKnown RBP12.8□□□□□ -0.36
TNF-208ENST00000449264 PCBD1P61457 104 aa12.8□□□□□ -0.36
TNF-208ENST00000449264 SCRN3Q0VDG4 424 aa12.8□□□□□ -0.36
TNF-208ENST00000449264 GABRA6Q16445 453 aa12.8□□□□□ -0.36
TNF-208ENST00000449264 SFRP5Q5T4F7 317 aa12.8□□□□□ -0.36
TNF-208ENST00000449264 RNLSQ5VYX0 342 aa12.8□□□□□ -0.36
TNF-208ENST00000449264 XAF1Q6GPH4 301 aa12.8□□□□□ -0.36
TNF-208ENST00000449264 OR7E24Q6IFN5 339 aa12.8□□□□□ -0.36
TNF-208ENST00000449264 KCTD18Q6PI47 426 aaPredicted RBP12.8□□□□□ -0.36
TNF-208ENST00000449264 FAM220AQ7Z4H9 259 aa12.8□□□□□ -0.36
TNF-208ENST00000449264 KRT77Q7Z794 578 aa12.8□□□□□ -0.36
TNF-208ENST00000449264 C1orf162Q8NEQ5 155 aaPredicted RBP12.8□□□□□ -0.36
TNF-208ENST00000449264 GJC3Q8NFK1 279 aa12.8□□□□□ -0.36
TNF-208ENST00000449264 NANOS1Q8WY41 292 aaKnown RBP12.8□□□□□ -0.36
TNF-208ENST00000449264 MRPL48Q96GC5 212 aaKnown RBP12.8□□□□□ -0.36
TNF-208ENST00000449264 ACOXLQ9NUZ1 547 aa12.8□□□□□ -0.36
TNF-208ENST00000449264 SLCO1C1Q9NYB5 712 aa12.8□□□□□ -0.36
TNF-208ENST00000449264 PLEK2Q9NYT0 353 aa12.8□□□□□ -0.36
TNF-208ENST00000449264 ERRFI1Q9UJM3 462 aaPredicted RBP12.8□□□□□ -0.36
TNF-208ENST00000449264 SLC5A6Q9Y289 635 aa12.8□□□□□ -0.36
TNF-208ENST00000449264 CAB39Q9Y376 341 aaPredicted RBP12.8□□□□□ -0.36
TNF-208ENST00000449264 RTTNQ86VV8 2226 aa12.79□□□□□ -0.36
TNF-208ENST00000449264 SPTBN1Q01082 2364 aaKnown RBP12.79□□□□□ -0.36
TNF-208ENST00000449264 PRR14LQ5THK1 2151 aa12.79□□□□□ -0.36
TNF-208ENST00000449264 SGCEO43556 437 aa12.79□□□□□ -0.36
TNF-208ENST00000449264 DOK2O60496 412 aa12.79□□□□□ -0.36
TNF-208ENST00000449264 HSMCR30P0CW71 290 aa12.79□□□□□ -0.36
TNF-208ENST00000449264 PSMB9P28065 219 aa12.79□□□□□ -0.36
TNF-208ENST00000449264 EGR3Q06889 387 aa12.79□□□□□ -0.36
TNF-208ENST00000449264 FAM27E3Q08E93 113 aa12.79□□□□□ -0.36
TNF-208ENST00000449264 DOC2BQ14184 412 aa12.79□□□□□ -0.36
TNF-208ENST00000449264 CDONQ4KMG0 1287 aa12.79□□□□□ -0.36
TNF-208ENST00000449264 ZNF774Q6NX45 483 aa12.79□□□□□ -0.36
TNF-208ENST00000449264 MTFR2Q6P444 385 aa12.79□□□□□ -0.36
TNF-208ENST00000449264 STAC2Q6ZMT1 411 aa12.79□□□□□ -0.36
TNF-208ENST00000449264 YIPF7Q8N8F6 280 aa12.79□□□□□ -0.36
TNF-208ENST00000449264 OR10S1Q8NGN2 331 aa12.79□□□□□ -0.36
TNF-208ENST00000449264 OR52N1Q8NH53 320 aa12.79□□□□□ -0.36
TNF-208ENST00000449264 AKR7LQ8NHP1 331 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms