RNA–Protein interactions for RNA: ENST00000449062.1

RTFDC1-204, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-204ENST00000449062 LINC00471Q8N535 108 aa12.03□□□□□ -0.48
RTFDC1-204ENST00000449062 NPEPL1Q8NDH3 523 aa12.03□□□□□ -0.48
RTFDC1-204ENST00000449062 OR9Q2Q8NGE9 314 aa12.03□□□□□ -0.48
RTFDC1-204ENST00000449062 OR2T29Q8NH02 315 aa12.03□□□□□ -0.48
RTFDC1-204ENST00000449062 POP5Q969H6 163 aaKnown RBP12.03□□□□□ -0.48
RTFDC1-204ENST00000449062 NMNAT3Q96T66 252 aa12.03□□□□□ -0.48
RTFDC1-204ENST00000449062 THTPAQ9BU02 230 aa12.03□□□□□ -0.48
RTFDC1-204ENST00000449062 OR51B6Q9H340 312 aa12.03□□□□□ -0.48
RTFDC1-204ENST00000449062 TPK1Q9H3S4 243 aa12.03□□□□□ -0.48
RTFDC1-204ENST00000449062 TAAR3PQ9P1P4 343 aa12.03□□□□□ -0.48
RTFDC1-204ENST00000449062 OR6C68A6NDL8 312 aa12.02□□□□□ -0.49
RTFDC1-204ENST00000449062 OR6C6A6NF89 314 aa12.02□□□□□ -0.49
RTFDC1-204ENST00000449062 BHLHE40O14503 412 aa12.02□□□□□ -0.49
RTFDC1-204ENST00000449062 GPANK1O95872 356 aa12.02□□□□□ -0.49
RTFDC1-204ENST00000449062 TFP02787 698 aa12.02□□□□□ -0.49
RTFDC1-204ENST00000449062 TACSTD2P09758 323 aa12.02□□□□□ -0.49
RTFDC1-204ENST00000449062 IGHV4-31P0DP07 118 aa12.02□□□□□ -0.49
RTFDC1-204ENST00000449062 GAAP10253 952 aa12.02□□□□□ -0.49
RTFDC1-204ENST00000449062 NAT2P11245 290 aa12.02□□□□□ -0.49
RTFDC1-204ENST00000449062 CCNOP22674 350 aa12.02□□□□□ -0.49
RTFDC1-204ENST00000449062 MPV17P39210 176 aa12.02□□□□□ -0.49
RTFDC1-204ENST00000449062 MMP15P51511 669 aa12.02□□□□□ -0.49
RTFDC1-204ENST00000449062 KLF3P57682 345 aaPredicted RBP12.02□□□□□ -0.49
RTFDC1-204ENST00000449062 CCDC92Q53HC0 331 aaPredicted RBP12.02□□□□□ -0.49
RTFDC1-204ENST00000449062 MBNL2Q5VZF2 373 aaKnown RBP12.02□□□□□ -0.49
RTFDC1-204ENST00000449062 VASH1Q7L8A9 365 aaPredicted RBP12.02□□□□□ -0.49
RTFDC1-204ENST00000449062 PRIMA1Q86XR5 153 aa12.02□□□□□ -0.49
RTFDC1-204ENST00000449062 ZNF540Q8NDQ6 660 aa12.02□□□□□ -0.49
RTFDC1-204ENST00000449062 OR8D4Q8NGM9 314 aa12.02□□□□□ -0.49
RTFDC1-204ENST00000449062 OR1J1Q8NGS3 322 aa12.02□□□□□ -0.49
RTFDC1-204ENST00000449062 OR4K13Q8NH42 304 aa12.02□□□□□ -0.49
RTFDC1-204ENST00000449062 FANK1Q8TC84 345 aa12.02□□□□□ -0.49
RTFDC1-204ENST00000449062 PIMREGQ9BSJ6 248 aa12.02□□□□□ -0.49
RTFDC1-204ENST00000449062 IFT27Q9BW83 186 aa12.02□□□□□ -0.49
RTFDC1-204ENST00000449062 PLA2G12AQ9BZM1 189 aa12.02□□□□□ -0.49
RTFDC1-204ENST00000449062 BPESC1Q9GZL8 116 aa12.02□□□□□ -0.49
RTFDC1-204ENST00000449062 SRA1Q9HD15 236 aaKnown RBP12.02□□□□□ -0.49
RTFDC1-204ENST00000449062 HINT3Q9NQE9 182 aaKnown RBP12.02□□□□□ -0.49
RTFDC1-204ENST00000449062 SLCO1C1Q9NYB5 712 aa12.02□□□□□ -0.49
RTFDC1-204ENST00000449062 NKIRAS2Q9NYR9 191 aa12.02□□□□□ -0.49
RTFDC1-204ENST00000449062 AQP12BA6NM10 295 aa12.01□□□□□ -0.49
RTFDC1-204ENST00000449062 C17orf100A8MU93 164 aa12.01□□□□□ -0.49
RTFDC1-204ENST00000449062 SGCEO43556 437 aa12.01□□□□□ -0.49
RTFDC1-204ENST00000449062 NCR1O76036 304 aa12.01□□□□□ -0.49
RTFDC1-204ENST00000449062 RAP2AP10114 183 aa12.01□□□□□ -0.49
RTFDC1-204ENST00000449062 ZNF23P17027 643 aa12.01□□□□□ -0.49
RTFDC1-204ENST00000449062 CRABP1P29762 137 aa12.01□□□□□ -0.49
RTFDC1-204ENST00000449062 MRPS11P82912 194 aaKnown RBP12.01□□□□□ -0.49
RTFDC1-204ENST00000449062 SCRN3Q0VDG4 424 aa12.01□□□□□ -0.49
RTFDC1-204ENST00000449062 AQP6Q13520 282 aa12.01□□□□□ -0.49
RTFDC1-204ENST00000449062 MICAQ29983 383 aa12.01□□□□□ -0.49
RTFDC1-204ENST00000449062 ALKBH6Q3KRA9 238 aa12.01□□□□□ -0.49
RTFDC1-204ENST00000449062 FAM98BQ52LJ0 330 aaKnown RBP12.01□□□□□ -0.49
RTFDC1-204ENST00000449062 CD300LDQ6UXZ3 194 aa12.01□□□□□ -0.49
RTFDC1-204ENST00000449062 RASSF6Q6ZTQ3 369 aa12.01□□□□□ -0.49
RTFDC1-204ENST00000449062 RFPL4BQ6ZWI9 263 aa12.01□□□□□ -0.49
RTFDC1-204ENST00000449062 AQP12AQ8IXF9 295 aa12.01□□□□□ -0.49
RTFDC1-204ENST00000449062 C1orf174Q8IYL3 243 aa12.01□□□□□ -0.49
RTFDC1-204ENST00000449062 SLC26A10Q8NG04 563 aa12.01□□□□□ -0.49
RTFDC1-204ENST00000449062 SLC25A40Q8TBP6 338 aa12.01□□□□□ -0.49
RTFDC1-204ENST00000449062 KLF14Q8TD94 323 aaPredicted RBP12.01□□□□□ -0.49
RTFDC1-204ENST00000449062 CANT1Q8WVQ1 401 aa12.01□□□□□ -0.49
RTFDC1-204ENST00000449062 GTF3AQ92664 365 aaKnown RBP12.01□□□□□ -0.49
RTFDC1-204ENST00000449062 C4orf45Q96LM5 186 aa12.01□□□□□ -0.49
RTFDC1-204ENST00000449062 CHID1Q9BWS9 393 aa12.01□□□□□ -0.49
RTFDC1-204ENST00000449062 DGCR6LQ9BY27 220 aa12.01□□□□□ -0.49
RTFDC1-204ENST00000449062 OR2J1Q9GZK6 312 aa12.01□□□□□ -0.49
RTFDC1-204ENST00000449062 RACGAP1Q9H0H5 632 aa12.01□□□□□ -0.49
RTFDC1-204ENST00000449062 EGLN3Q9H6Z9 239 aa12.01□□□□□ -0.49
RTFDC1-204ENST00000449062 YAE1D1Q9NRH1 226 aa12.01□□□□□ -0.49
RTFDC1-204ENST00000449062 TBCCD1Q9NVR7 557 aa12.01□□□□□ -0.49
RTFDC1-204ENST00000449062 ASH2LQ9UBL3 628 aa12.01□□□□□ -0.49
RTFDC1-204ENST00000449062 EIF3KQ9UBQ5 218 aaKnown RBP12.01□□□□□ -0.49
RTFDC1-204ENST00000449062 LHFPL6Q9Y693 200 aa12.01□□□□□ -0.49
RTFDC1-204ENST00000449062 CDH10Q9Y6N8 788 aa12.01□□□□□ -0.49
RTFDC1-204ENST00000449062 FBN1P35555 2871 aaKnown RBP12□□□□□ -0.49
RTFDC1-204ENST00000449062 RER1O15258 196 aa12□□□□□ -0.49
RTFDC1-204ENST00000449062 RP2O75695 350 aa12□□□□□ -0.49
RTFDC1-204ENST00000449062 CCNB2O95067 398 aa12□□□□□ -0.49
RTFDC1-204ENST00000449062 ERCC1P07992 297 aaPredicted RBP12□□□□□ -0.49
RTFDC1-204ENST00000449062 MAGEB1P43366 347 aa12□□□□□ -0.49
RTFDC1-204ENST00000449062 SELENOVP59797 346 aa12□□□□□ -0.49
RTFDC1-204ENST00000449062 PPP1CBP62140 327 aa12□□□□□ -0.49
RTFDC1-204ENST00000449062 GGTLC2Q14390 218 aa12□□□□□ -0.49
RTFDC1-204ENST00000449062 CARTPTQ16568 116 aa12□□□□□ -0.49
RTFDC1-204ENST00000449062 MEP1BQ16820 701 aa12□□□□□ -0.49
RTFDC1-204ENST00000449062 KRTAP27-1Q3LI81 207 aa12□□□□□ -0.49
RTFDC1-204ENST00000449062 ZNF718Q3SXZ3 478 aa12□□□□□ -0.49
RTFDC1-204ENST00000449062 SPATA46Q5T0L3 261 aa12□□□□□ -0.49
RTFDC1-204ENST00000449062 SLC35F1Q5T1Q4 408 aa12□□□□□ -0.49
RTFDC1-204ENST00000449062 C6orf52Q5T4I8 152 aa12□□□□□ -0.49
RTFDC1-204ENST00000449062 CYB5R2Q6BCY4 276 aa12□□□□□ -0.49
RTFDC1-204ENST00000449062 LEG1Q6P5S2 330 aa12□□□□□ -0.49
RTFDC1-204ENST00000449062 TMEM179BQ7Z7N9 219 aa12□□□□□ -0.49
RTFDC1-204ENST00000449062 HIPK1Q86Z02 1210 aa12□□□□□ -0.49
RTFDC1-204ENST00000449062 LNX2Q8N448 690 aa12□□□□□ -0.49
RTFDC1-204ENST00000449062 ZNRF4Q8WWF5 429 aa12□□□□□ -0.49
RTFDC1-204ENST00000449062 SLC7A6Q92536 515 aa12□□□□□ -0.49
RTFDC1-204ENST00000449062 RDH5Q92781 318 aa12□□□□□ -0.49
RTFDC1-204ENST00000449062 YIPF5Q969M3 257 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms