RNA–Protein interactions for RNA: ENST00000448416.6

SYNPO2-204, Transcript of synaptopodin 2, humanhuman

TSL 2 BASIC

Gene SYNPO2, Length 4,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-204ENST00000448416 OR1D2P34982 312 aa8.51□□□□□ -1.05
SYNPO2-204ENST00000448416 KHDC3LQ587J8 217 aa8.51□□□□□ -1.05
SYNPO2-204ENST00000448416 TBC1D3GQ6DHY5 549 aa8.51□□□□□ -1.05
SYNPO2-204ENST00000448416 SLC48A1Q6P1K1 146 aa8.51□□□□□ -1.05
SYNPO2-204ENST00000448416 PNLDC1Q8NA58 520 aaKnown RBP8.51□□□□□ -1.05
SYNPO2-204ENST00000448416 FIBINQ8TAL6 211 aa8.51□□□□□ -1.05
SYNPO2-204ENST00000448416 ZPLD1Q8TCW7 415 aa8.51□□□□□ -1.05
SYNPO2-204ENST00000448416 LRFN5Q96NI6 719 aa8.51□□□□□ -1.05
SYNPO2-204ENST00000448416 AQP10Q96PS8 301 aa8.51□□□□□ -1.05
SYNPO2-204ENST00000448416 SLC5A7Q9GZV3 580 aa8.51□□□□□ -1.05
SYNPO2-204ENST00000448416 TRBV5-7A0A0A0MS05 114 aa8.51□□□□□ -1.05
SYNPO2-204ENST00000448416 PHOX2AO14813 284 aa8.51□□□□□ -1.05
SYNPO2-204ENST00000448416 GPANK1O95872 356 aa8.51□□□□□ -1.05
SYNPO2-204ENST00000448416 EOMESO95936 686 aa8.51□□□□□ -1.05
SYNPO2-204ENST00000448416 LRG1P02750 347 aa8.51□□□□□ -1.05
SYNPO2-204ENST00000448416 FABP4P15090 132 aa8.51□□□□□ -1.05
SYNPO2-204ENST00000448416 CCKBRP32239 447 aa8.51□□□□□ -1.05
SYNPO2-204ENST00000448416 RPS23P62266 143 aaKnown RBP8.51□□□□□ -1.05
SYNPO2-204ENST00000448416 SLC35D3Q5M8T2 416 aa8.51□□□□□ -1.05
SYNPO2-204ENST00000448416 ZNF684Q5T5D7 378 aa8.51□□□□□ -1.05
SYNPO2-204ENST00000448416 GFI1BQ5VTD9 330 aa8.51□□□□□ -1.05
SYNPO2-204ENST00000448416 RTN4RL1Q86UN2 441 aaPredicted RBP8.51□□□□□ -1.05
SYNPO2-204ENST00000448416 GKN2Q86XP6 184 aa8.51□□□□□ -1.05
SYNPO2-204ENST00000448416 FAM219AQ8IW50 185 aa8.51□□□□□ -1.05
SYNPO2-204ENST00000448416 PLPP7Q8NBV4 271 aa8.51□□□□□ -1.05
SYNPO2-204ENST00000448416 NPEPL1Q8NDH3 523 aa8.51□□□□□ -1.05
SYNPO2-204ENST00000448416 ALG12Q9BV10 488 aa8.51□□□□□ -1.05
SYNPO2-204ENST00000448416 PTGES2Q9H7Z7 377 aa8.51□□□□□ -1.05
SYNPO2-204ENST00000448416 ADAP2Q9NPF8 381 aa8.51□□□□□ -1.05
SYNPO2-204ENST00000448416 KLK13Q9UKR3 277 aa8.51□□□□□ -1.05
SYNPO2-204ENST00000448416 PIAS3Q9Y6X2 628 aa8.51□□□□□ -1.05
SYNPO2-204ENST00000448416 OR5H15A6NDH6 313 aa8.5□□□□□ -1.05
SYNPO2-204ENST00000448416 OR5H1A6NKK0 313 aa8.5□□□□□ -1.05
SYNPO2-204ENST00000448416 PEX12O00623 359 aa8.5□□□□□ -1.05
SYNPO2-204ENST00000448416 CLEC3AO75596 197 aa8.5□□□□□ -1.05
SYNPO2-204ENST00000448416 DBIP07108 87 aaKnown RBP8.5□□□□□ -1.05
SYNPO2-204ENST00000448416 ELFN1P0C7U0 828 aa8.5□□□□□ -1.05
SYNPO2-204ENST00000448416 HIST1H1TP22492 207 aaPredicted RBP8.5□□□□□ -1.05
SYNPO2-204ENST00000448416 CRABP1P29762 137 aa8.5□□□□□ -1.05
SYNPO2-204ENST00000448416 MAS1LP35410 378 aa8.5□□□□□ -1.05
SYNPO2-204ENST00000448416 ARRB1P49407 418 aaPredicted RBP8.5□□□□□ -1.05
SYNPO2-204ENST00000448416 NKX6-1P78426 367 aaPredicted RBP8.5□□□□□ -1.05
SYNPO2-204ENST00000448416 NHLH2Q02577 135 aa8.5□□□□□ -1.05
SYNPO2-204ENST00000448416 ZNF616Q08AN1 781 aa8.5□□□□□ -1.05
SYNPO2-204ENST00000448416 TOMM34Q15785 309 aaPredicted RBP8.5□□□□□ -1.05
SYNPO2-204ENST00000448416 ARHGAP11BQ3KRB8 267 aa8.5□□□□□ -1.05
SYNPO2-204ENST00000448416 MIDNQ504T8 468 aa8.5□□□□□ -1.05
SYNPO2-204ENST00000448416 DNLZQ5SXM8 178 aa8.5□□□□□ -1.05
SYNPO2-204ENST00000448416 HIST2H3PS2Q5TEC6 136 aa8.5□□□□□ -1.05
SYNPO2-204ENST00000448416 ZNF385CQ66K41 422 aaPredicted RBP8.5□□□□□ -1.05
SYNPO2-204ENST00000448416 LSM7Q9UK45 103 aaKnown RBP8.5□□□□□ -1.05
SYNPO2-204ENST00000448416 ZNF346Q9UL40 294 aaKnown RBP8.5□□□□□ -1.05
SYNPO2-204ENST00000448416 ABT1Q9ULW3 272 aaKnown RBP8.5□□□□□ -1.05
SYNPO2-204ENST00000448416 HS3ST2Q9Y278 367 aa8.5□□□□□ -1.05
SYNPO2-204ENST00000448416 PUS1Q9Y606 427 aaKnown RBP eCLIP8.5□□□□□ -1.05
SYNPO2-204ENST00000448416 OR4C45A6NMZ5 311 aa8.5□□□□□ -1.05
SYNPO2-204ENST00000448416 LEFTY2O00292 366 aa8.5□□□□□ -1.05
SYNPO2-204ENST00000448416 DNAJB6O75190 326 aa8.5□□□□□ -1.05
SYNPO2-204ENST00000448416 GLCEO94923 617 aa8.5□□□□□ -1.05
SYNPO2-204ENST00000448416 SOD3P08294 240 aa8.5□□□□□ -1.05
SYNPO2-204ENST00000448416 SNRPCP09234 159 aaKnown RBP8.5□□□□□ -1.05
SYNPO2-204ENST00000448416 C6P13671 934 aa8.5□□□□□ -1.05
SYNPO2-204ENST00000448416 NID1P14543 1247 aa8.5□□□□□ -1.05
SYNPO2-204ENST00000448416 VASPP50552 380 aaPredicted RBP8.5□□□□□ -1.05
SYNPO2-204ENST00000448416 PMPCAQ10713 525 aa8.5□□□□□ -1.05
SYNPO2-204ENST00000448416 CCL14Q16627 93 aa8.5□□□□□ -1.05
SYNPO2-204ENST00000448416 ZNF658BQ4V348 819 aaPredicted RBP8.5□□□□□ -1.05
SYNPO2-204ENST00000448416 FAHD2BQ6P2I3 314 aaPredicted RBP8.5□□□□□ -1.05
SYNPO2-204ENST00000448416 SLC24A5Q71RS6 500 aa8.5□□□□□ -1.05
SYNPO2-204ENST00000448416 MAMDC2Q7Z304 686 aaPredicted RBP8.5□□□□□ -1.05
SYNPO2-204ENST00000448416 ANKRD33Q7Z3H0 272 aa8.5□□□□□ -1.05
SYNPO2-204ENST00000448416 LCN9Q8WX39 176 aa8.5□□□□□ -1.05
SYNPO2-204ENST00000448416 FAHD2AQ96GK7 314 aa8.5□□□□□ -1.05
SYNPO2-204ENST00000448416 RBM18Q96H35 190 aaKnown RBP8.5□□□□□ -1.05
SYNPO2-204ENST00000448416 SLC41A2Q96JW4 573 aa8.5□□□□□ -1.05
SYNPO2-204ENST00000448416 AICDAQ9GZX7 198 aa8.5□□□□□ -1.05
SYNPO2-204ENST00000448416 METTL9Q9H1A3 318 aa8.5□□□□□ -1.05
SYNPO2-204ENST00000448416 DUSP15Q9H1R2 295 aaPredicted RBP8.5□□□□□ -1.05
SYNPO2-204ENST00000448416 STARD10Q9Y365 291 aa8.5□□□□□ -1.05
SYNPO2-204ENST00000448416 HDGFL3Q9Y3E1 203 aa8.5□□□□□ -1.05
SYNPO2-204ENST00000448416 PRRC2BQ5JSZ5 2229 aaKnown RBP8.5□□□□□ -1.05
SYNPO2-204ENST00000448416 ADAP1O75689 374 aa8.5□□□□□ -1.05
SYNPO2-204ENST00000448416 CSTBP04080 98 aaKnown RBP8.5□□□□□ -1.05
SYNPO2-204ENST00000448416 IFNA6P05013 189 aa8.5□□□□□ -1.05
SYNPO2-204ENST00000448416 SNCAP37840 140 aa8.5□□□□□ -1.05
SYNPO2-204ENST00000448416 S100A10P60903 97 aa8.5□□□□□ -1.05
SYNPO2-204ENST00000448416 FOXRED2Q8IWF2 684 aa8.5□□□□□ -1.05
SYNPO2-204ENST00000448416 ZNF595Q8IYB9 648 aa8.5□□□□□ -1.05
SYNPO2-204ENST00000448416 CMTM8Q8IZV2 173 aa8.5□□□□□ -1.05
SYNPO2-204ENST00000448416 ZNF619Q8N2I2 560 aa8.5□□□□□ -1.05
SYNPO2-204ENST00000448416 SEMA6DQ8NFY4 1073 aa8.5□□□□□ -1.05
SYNPO2-204ENST00000448416 NKD1Q969G9 470 aa8.5□□□□□ -1.05
SYNPO2-204ENST00000448416 RELTQ969Z4 430 aa8.5□□□□□ -1.05
SYNPO2-204ENST00000448416 RASD2Q96D21 266 aa8.5□□□□□ -1.05
SYNPO2-204ENST00000448416 KXD1Q9BQD3 176 aa8.5□□□□□ -1.05
SYNPO2-204ENST00000448416 ATG101Q9BSB4 218 aa8.5□□□□□ -1.05
SYNPO2-204ENST00000448416 EPHX3Q9H6B9 360 aa8.5□□□□□ -1.05
SYNPO2-204ENST00000448416 CRLF2Q9HC73 371 aa8.5□□□□□ -1.05
SYNPO2-204ENST00000448416 SLC2A8Q9NY64 477 aa8.5□□□□□ -1.05
SYNPO2-204ENST00000448416 KLHDC2Q9Y2U9 406 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms