RNA–Protein interactions for RNA: ENST00000447345.5

RFC4-208, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-208ENST00000447345 YTHDF3Q7Z739 585 aaKnown RBP10.28□□□□□ -0.76
RFC4-208ENST00000447345 ZBTB46Q86UZ6 589 aa10.28□□□□□ -0.76
RFC4-208ENST00000447345 HIPK1Q86Z02 1210 aa10.28□□□□□ -0.76
RFC4-208ENST00000447345 ZDHHC13Q8IUH4 622 aa10.28□□□□□ -0.76
RFC4-208ENST00000447345 ALDH16A1Q8IZ83 802 aa10.28□□□□□ -0.76
RFC4-208ENST00000447345 LRRC75A-AS1Q8N1F1 130 aa10.28□□□□□ -0.76
RFC4-208ENST00000447345 SLC26A10Q8NG04 563 aa10.28□□□□□ -0.76
RFC4-208ENST00000447345 OR1J2Q8NGS2 313 aa10.28□□□□□ -0.76
RFC4-208ENST00000447345 OR6K6Q8NGW6 343 aa10.28□□□□□ -0.76
RFC4-208ENST00000447345 OR2T4Q8NH00 348 aa10.28□□□□□ -0.76
RFC4-208ENST00000447345 ZNRF4Q8WWF5 429 aa10.28□□□□□ -0.76
RFC4-208ENST00000447345 NRBF2Q96F24 287 aa10.28□□□□□ -0.76
RFC4-208ENST00000447345 TRMT61AQ96FX7 289 aaKnown RBP10.28□□□□□ -0.76
RFC4-208ENST00000447345 PKP2Q99959 881 aa10.28□□□□□ -0.76
RFC4-208ENST00000447345 SYT3Q9BQG1 590 aa10.28□□□□□ -0.76
RFC4-208ENST00000447345 PLK3Q9H4B4 646 aa10.28□□□□□ -0.76
RFC4-208ENST00000447345 ZNF442Q9H7R0 627 aa10.28□□□□□ -0.76
RFC4-208ENST00000447345 CMC2Q9NRP2 79 aa10.28□□□□□ -0.76
RFC4-208ENST00000447345 KRT84Q9NSB2 600 aa10.28□□□□□ -0.76
RFC4-208ENST00000447345 ZNF701Q9NV72 531 aaPredicted RBP10.28□□□□□ -0.76
RFC4-208ENST00000447345 PLEK2Q9NYT0 353 aa10.28□□□□□ -0.76
RFC4-208ENST00000447345 OAZ3Q9UMX2 235 aa10.28□□□□□ -0.76
RFC4-208ENST00000447345 LHFPL6Q9Y693 200 aa10.28□□□□□ -0.76
RFC4-208ENST00000447345 RER1O15258 196 aa10.27□□□□□ -0.77
RFC4-208ENST00000447345 SNAP29O95721 258 aa10.27□□□□□ -0.77
RFC4-208ENST00000447345 IGHV4-39P01824 125 aa10.27□□□□□ -0.77
RFC4-208ENST00000447345 SPI1P17947 270 aa10.27□□□□□ -0.77
RFC4-208ENST00000447345 LSM6P62312 80 aaKnown RBP10.27□□□□□ -0.77
RFC4-208ENST00000447345 MST1LQ2TV78 715 aa10.27□□□□□ -0.77
RFC4-208ENST00000447345 SPATA46Q5T0L3 261 aa10.27□□□□□ -0.77
RFC4-208ENST00000447345 TMEM154Q6P9G4 183 aa10.27□□□□□ -0.77
RFC4-208ENST00000447345 SPNS3Q6ZMD2 512 aa10.27□□□□□ -0.77
RFC4-208ENST00000447345 RFPL4BQ6ZWI9 263 aa10.27□□□□□ -0.77
RFC4-208ENST00000447345 VASH1Q7L8A9 365 aaPredicted RBP10.27□□□□□ -0.77
RFC4-208ENST00000447345 ZNF101Q8IZC7 436 aa10.27□□□□□ -0.77
RFC4-208ENST00000447345 DNAJC9Q8WXX5 260 aa10.27□□□□□ -0.77
RFC4-208ENST00000447345 SLC7A6Q92536 515 aa10.27□□□□□ -0.77
RFC4-208ENST00000447345 CENPNQ96H22 339 aaPredicted RBP10.27□□□□□ -0.77
RFC4-208ENST00000447345 POM121L2Q96KW2 1035 aa10.27□□□□□ -0.77
RFC4-208ENST00000447345 Q96MF0 132 aa10.27□□□□□ -0.77
RFC4-208ENST00000447345 DDOQ99489 341 aa10.27□□□□□ -0.77
RFC4-208ENST00000447345 VRK1Q99986 396 aaPredicted RBP10.27□□□□□ -0.77
RFC4-208ENST00000447345 RBM4Q9BWF3 364 aaKnown RBP10.27□□□□□ -0.77
RFC4-208ENST00000447345 HCAR1Q9BXC0 346 aa10.27□□□□□ -0.77
RFC4-208ENST00000447345 MRPL37Q9BZE1 423 aaKnown RBP10.27□□□□□ -0.77
RFC4-208ENST00000447345 GABARAPL1Q9H0R8 117 aa10.27□□□□□ -0.77
RFC4-208ENST00000447345 DYNLRB1Q9NP97 96 aa10.27□□□□□ -0.77
RFC4-208ENST00000447345 MRPL22Q9NWU5 206 aaKnown RBP10.27□□□□□ -0.77
RFC4-208ENST00000447345 CMAHPQ9Y471 501 aa10.27□□□□□ -0.77
RFC4-208ENST00000447345 CR1P17927 2039 aa10.27□□□□□ -0.77
RFC4-208ENST00000447345 TEP1Q99973 2627 aaKnown RBP10.27□□□□□ -0.77
RFC4-208ENST00000447345 VPS13CQ709C8 3753 aa10.26□□□□□ -0.77
RFC4-208ENST00000447345 A0A1W2PPW3 197 aa10.26□□□□□ -0.77
RFC4-208ENST00000447345 B9A039 149 aa10.26□□□□□ -0.77
RFC4-208ENST00000447345 ANKRD65E5RJM6 399 aa10.26□□□□□ -0.77
RFC4-208ENST00000447345 M0R129 80 aa10.26□□□□□ -0.77
RFC4-208ENST00000447345 SURF4O15260 269 aa10.26□□□□□ -0.77
RFC4-208ENST00000447345 TMCC2O75069 709 aa10.26□□□□□ -0.77
RFC4-208ENST00000447345 LY6HO94772 140 aa10.26□□□□□ -0.77
RFC4-208ENST00000447345 SPARCP09486 303 aa10.26□□□□□ -0.77
RFC4-208ENST00000447345 PSKH1P11801 424 aa10.26□□□□□ -0.77
RFC4-208ENST00000447345 ZNF823P16415 610 aa10.26□□□□□ -0.77
RFC4-208ENST00000447345 PAICSP22234 425 aaKnown RBP10.26□□□□□ -0.77
RFC4-208ENST00000447345 IGFBP5P24593 272 aa10.26□□□□□ -0.77
RFC4-208ENST00000447345 GLRXP35754 106 aa10.26□□□□□ -0.77
RFC4-208ENST00000447345 WNT5AP41221 380 aa10.26□□□□□ -0.77
RFC4-208ENST00000447345 CRISP1P54107 249 aa10.26□□□□□ -0.77
RFC4-208ENST00000447345 RPS23P62266 143 aaKnown RBP10.26□□□□□ -0.77
RFC4-208ENST00000447345 MAD2L1BPQ15013 274 aaPredicted RBP10.26□□□□□ -0.77
RFC4-208ENST00000447345 RAB35Q15286 201 aa10.26□□□□□ -0.77
RFC4-208ENST00000447345 EFNB3Q15768 340 aa10.26□□□□□ -0.77
RFC4-208ENST00000447345 KCNMB1Q16558 191 aa10.26□□□□□ -0.77
RFC4-208ENST00000447345 SWI5Q1ZZU3 235 aa10.26□□□□□ -0.77
RFC4-208ENST00000447345 ALKBH6Q3KRA9 238 aa10.26□□□□□ -0.77
RFC4-208ENST00000447345 CCDC92Q53HC0 331 aaPredicted RBP10.26□□□□□ -0.77
RFC4-208ENST00000447345 RGS7BPQ6MZT1 257 aaPredicted RBP10.26□□□□□ -0.77
RFC4-208ENST00000447345 ZFP1Q6P2D0 407 aa10.26□□□□□ -0.77
RFC4-208ENST00000447345 PLBD1Q6P4A8 553 aa10.26□□□□□ -0.77
RFC4-208ENST00000447345 CFAP77Q6ZQR2 320 aa10.26□□□□□ -0.77
RFC4-208ENST00000447345 SYT9Q86SS6 491 aa10.26□□□□□ -0.77
RFC4-208ENST00000447345 LRP11Q86VZ4 500 aa10.26□□□□□ -0.77
RFC4-208ENST00000447345 OR1J1Q8NGS3 322 aa10.26□□□□□ -0.77
RFC4-208ENST00000447345 ABHD4Q8TB40 342 aa10.26□□□□□ -0.77
RFC4-208ENST00000447345 MRPL24Q96A35 216 aaKnown RBP10.26□□□□□ -0.77
RFC4-208ENST00000447345 PLEKHA8Q96JA3 519 aa10.26□□□□□ -0.77
RFC4-208ENST00000447345 CIB1Q99828 191 aa10.26□□□□□ -0.77
RFC4-208ENST00000447345 CDADC1Q9BWV3 514 aa10.26□□□□□ -0.77
RFC4-208ENST00000447345 NMNAT2Q9BZQ4 307 aa10.26□□□□□ -0.77
RFC4-208ENST00000447345 OR51V1Q9H2C8 321 aa10.26□□□□□ -0.77
RFC4-208ENST00000447345 SLC25A19Q9HC21 320 aa10.26□□□□□ -0.77
RFC4-208ENST00000447345 MYEF2Q9P2K5 600 aaKnown RBP10.26□□□□□ -0.77
RFC4-208ENST00000447345 DUSP13Q9UII6 198 aa10.26□□□□□ -0.77
RFC4-208ENST00000447345 NDRG4Q9ULP0 352 aaKnown RBP10.26□□□□□ -0.77
RFC4-208ENST00000447345 COMMD3-BMI1R4GMX3 469 aa10.26□□□□□ -0.77
RFC4-208ENST00000447345 PMF1-BGLAPU3KQ54 211 aa10.26□□□□□ -0.77
RFC4-208ENST00000447345 ACANP16112 2415 aa10.25□□□□□ -0.77
RFC4-208ENST00000447345 TRIM64A6NGJ6 449 aa10.25□□□□□ -0.77
RFC4-208ENST00000447345 TRIM64BA6NI03 449 aa10.25□□□□□ -0.77
RFC4-208ENST00000447345 VSTM5A8MXK1 200 aa10.25□□□□□ -0.77
RFC4-208ENST00000447345 PRR23D1E9PI22 279 aaPredicted RBP10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms