RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 CPAMD8Q8IZJ3 1885 aa17.14■□□□□ 0.33
SDCBP-204ENST00000447182 OR52N5Q8NH56 324 aa17.14■□□□□ 0.33
SDCBP-204ENST00000447182 SLC6A7Q99884 636 aa17.14■□□□□ 0.33
SDCBP-204ENST00000447182 WDR13Q9H1Z4 485 aa17.14■□□□□ 0.33
SDCBP-204ENST00000447182 KLK13Q9UKR3 277 aa17.14■□□□□ 0.33
SDCBP-204ENST00000447182 HHLA2Q9UM44 414 aa17.14■□□□□ 0.33
SDCBP-204ENST00000447182 MMACHCQ9Y4U1 282 aa17.14■□□□□ 0.33
SDCBP-204ENST00000447182 KIF26BQ2KJY2 2108 aa17.13■□□□□ 0.33
SDCBP-204ENST00000447182 TCRBV21S2A2A0A5A6 115 aa17.13■□□□□ 0.33
SDCBP-204ENST00000447182 ISG15P05161 165 aa17.13■□□□□ 0.33
SDCBP-204ENST00000447182 PGCP20142 388 aa17.13■□□□□ 0.33
SDCBP-204ENST00000447182 RAB6AP20340 208 aa17.13■□□□□ 0.33
SDCBP-204ENST00000447182 CAPZBP47756 277 aa17.13■□□□□ 0.33
SDCBP-204ENST00000447182 CAPZA1P52907 286 aa17.13■□□□□ 0.33
SDCBP-204ENST00000447182 VWA2Q5GFL6 755 aa17.13■□□□□ 0.33
SDCBP-204ENST00000447182 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.13■□□□□ 0.33
SDCBP-204ENST00000447182 LRFN4Q6PJG9 635 aa17.13■□□□□ 0.33
SDCBP-204ENST00000447182 ATRAIDQ6UW56 229 aa17.13■□□□□ 0.33
SDCBP-204ENST00000447182 TMEM17Q86X19 198 aa17.13■□□□□ 0.33
SDCBP-204ENST00000447182 LYPD6Q86Y78 171 aa17.13■□□□□ 0.33
SDCBP-204ENST00000447182 TMEM151BQ8IW70 566 aa17.13■□□□□ 0.33
SDCBP-204ENST00000447182 OR51A2Q8NGJ7 313 aa17.13■□□□□ 0.33
SDCBP-204ENST00000447182 SLC25A36Q96CQ1 311 aa17.13■□□□□ 0.33
SDCBP-204ENST00000447182 OR8D2Q9GZM6 311 aa17.13■□□□□ 0.33
SDCBP-204ENST00000447182 FBXO4Q9UKT5 387 aa17.13■□□□□ 0.33
SDCBP-204ENST00000447182 HRH3Q9Y5N1 445 aa17.13■□□□□ 0.33
SDCBP-204ENST00000447182 R4GMQ9 66 aa17.13■□□□□ 0.33
SDCBP-204ENST00000447182 FITM1A5D6W6 292 aa17.12■□□□□ 0.33
SDCBP-204ENST00000447182 MPTX1A8MV57 137 aa17.12■□□□□ 0.33
SDCBP-204ENST00000447182 DISC1C4P0D8 188 aa17.12■□□□□ 0.33
SDCBP-204ENST00000447182 ALG1L2C9J202 215 aa17.12■□□□□ 0.33
SDCBP-204ENST00000447182 THEGLP0DJG4 465 aa17.12■□□□□ 0.33
SDCBP-204ENST00000447182 STARP49675 285 aa17.12■□□□□ 0.33
SDCBP-204ENST00000447182 DCAF7P61962 342 aa17.12■□□□□ 0.33
SDCBP-204ENST00000447182 ZMYND11Q15326 602 aa17.12■□□□□ 0.33
SDCBP-204ENST00000447182 PAPD4Q6PIY7 484 aaKnown RBP17.12■□□□□ 0.33
SDCBP-204ENST00000447182 POMZP3Q6PJE2 187 aa17.12■□□□□ 0.33
SDCBP-204ENST00000447182 SLC25A42Q86VD7 318 aa17.12■□□□□ 0.33
SDCBP-204ENST00000447182 FAM174AQ8TBP5 190 aa17.12■□□□□ 0.33
SDCBP-204ENST00000447182 AQP3Q92482 292 aa17.12■□□□□ 0.33
SDCBP-204ENST00000447182 ZBTB8AQ96BR9 441 aa17.12■□□□□ 0.33
SDCBP-204ENST00000447182 CMKLR1Q99788 373 aa17.12■□□□□ 0.33
SDCBP-204ENST00000447182 PRRT1Q99946 306 aa17.12■□□□□ 0.33
SDCBP-204ENST00000447182 NUDT9Q9BW91 350 aa17.12■□□□□ 0.33
SDCBP-204ENST00000447182 TMEM185BQ9H7F4 350 aa17.12■□□□□ 0.33
SDCBP-204ENST00000447182 COMMD9Q9P000 198 aa17.12■□□□□ 0.33
SDCBP-204ENST00000447182 TDRD6O60522 2096 aaKnown RBP17.12■□□□□ 0.33
SDCBP-204ENST00000447182 OR14I1A6ND48 311 aa17.12■□□□□ 0.33
SDCBP-204ENST00000447182 DNASE2O00115 360 aaPredicted RBP17.12■□□□□ 0.33
SDCBP-204ENST00000447182 NUPL2O15504 423 aaKnown RBP17.12■□□□□ 0.33
SDCBP-204ENST00000447182 HLA-AP01891 365 aaKnown RBP17.12■□□□□ 0.33
SDCBP-204ENST00000447182 GP1BBP13224 206 aa17.12■□□□□ 0.33
SDCBP-204ENST00000447182 ZNF28P17035 718 aa17.12■□□□□ 0.33
SDCBP-204ENST00000447182 CNR1P21554 472 aa17.12■□□□□ 0.33
SDCBP-204ENST00000447182 ZBTB25P24278 435 aa17.12■□□□□ 0.33
SDCBP-204ENST00000447182 GLO1Q04760 184 aa17.12■□□□□ 0.33
SDCBP-204ENST00000447182 ELOCQ15369 112 aa17.12■□□□□ 0.33
SDCBP-204ENST00000447182 MOGAT2Q3SYC2 334 aa17.12■□□□□ 0.33
SDCBP-204ENST00000447182 FBXO46Q6PJ61 603 aaPredicted RBP17.12■□□□□ 0.33
SDCBP-204ENST00000447182 ACOT7LQ6ZUV0 252 aa17.12■□□□□ 0.33
SDCBP-204ENST00000447182 ZNF584Q8IVC4 421 aa17.12■□□□□ 0.33
SDCBP-204ENST00000447182 PRR22Q8IZ63 422 aa17.12■□□□□ 0.33
SDCBP-204ENST00000447182 NKAIN3Q8N8D7 197 aa17.12■□□□□ 0.33
SDCBP-204ENST00000447182 OR13C3Q8NGS6 347 aa17.12■□□□□ 0.33
SDCBP-204ENST00000447182 ZNF721Q8TF20 911 aa17.12■□□□□ 0.33
SDCBP-204ENST00000447182 IFT46Q9NQC8 304 aa17.12■□□□□ 0.33
SDCBP-204ENST00000447182 VSIG4Q9Y279 399 aa17.12■□□□□ 0.33
SDCBP-204ENST00000447182 NOP16Q9Y3C1 178 aaKnown RBP17.12■□□□□ 0.33
SDCBP-204ENST00000447182 RHBDD3Q9Y3P4 386 aa17.12■□□□□ 0.33
SDCBP-204ENST00000447182 DCDC2BA2VCK2 349 aa17.11■□□□□ 0.33
SDCBP-204ENST00000447182 RNF222A6NCQ9 220 aa17.11■□□□□ 0.33
SDCBP-204ENST00000447182 GMFGO60234 142 aa17.11■□□□□ 0.33
SDCBP-204ENST00000447182 DDAH2O95865 285 aa17.11■□□□□ 0.33
SDCBP-204ENST00000447182 IL2RAP01589 272 aa17.11■□□□□ 0.33
SDCBP-204ENST00000447182 ICAM2P13598 275 aa17.11■□□□□ 0.33
SDCBP-204ENST00000447182 IL12BP29460 328 aa17.11■□□□□ 0.33
SDCBP-204ENST00000447182 CRABP1P29762 137 aa17.11■□□□□ 0.33
SDCBP-204ENST00000447182 DNASE1L1P49184 302 aa17.11■□□□□ 0.33
SDCBP-204ENST00000447182 ARRB1P49407 418 aaPredicted RBP17.11■□□□□ 0.33
SDCBP-204ENST00000447182 BLKP51451 505 aa17.11■□□□□ 0.33
SDCBP-204ENST00000447182 CCR5P51681 352 aa17.11■□□□□ 0.33
SDCBP-204ENST00000447182 FAM74A1Q5RGS3 127 aa17.11■□□□□ 0.33
SDCBP-204ENST00000447182 RAB12Q6IQ22 244 aa17.11■□□□□ 0.33
SDCBP-204ENST00000447182 MDGA2Q7Z553 956 aa17.11■□□□□ 0.33
SDCBP-204ENST00000447182 LYG2Q86SG7 212 aa17.11■□□□□ 0.33
SDCBP-204ENST00000447182 MARCH3Q86UD3 253 aa17.11■□□□□ 0.33
SDCBP-204ENST00000447182 FOXRED1Q96CU9 486 aaPredicted RBP17.11■□□□□ 0.33
SDCBP-204ENST00000447182 DNAJA3Q96EY1 480 aa17.11■□□□□ 0.33
SDCBP-204ENST00000447182 VRK1Q99986 396 aaPredicted RBP17.11■□□□□ 0.33
SDCBP-204ENST00000447182 G6PC2Q9NQR9 355 aa17.11■□□□□ 0.33
SDCBP-204ENST00000447182 TAS2R3Q9NYW6 316 aa17.11■□□□□ 0.33
SDCBP-204ENST00000447182 IGKV3D-11A0A0A0MRZ8 115 aa17.11■□□□□ 0.33
SDCBP-204ENST00000447182 TMEM150CB9EJG8 249 aa17.11■□□□□ 0.33
SDCBP-204ENST00000447182 PLPP3O14495 311 aa17.11■□□□□ 0.33
SDCBP-204ENST00000447182 TSPAN2O60636 221 aa17.11■□□□□ 0.33
SDCBP-204ENST00000447182 GP1BAP07359 652 aa17.11■□□□□ 0.33
SDCBP-204ENST00000447182 LUMP51884 338 aaPredicted RBP17.11■□□□□ 0.33
SDCBP-204ENST00000447182 POLR2HP52434 150 aaKnown RBP17.11■□□□□ 0.33
SDCBP-204ENST00000447182 SCGB2B2Q4G0G5 96 aa17.11■□□□□ 0.33
SDCBP-204ENST00000447182 JAGN1Q8N5M9 183 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms