RNA–Protein interactions for RNA: ENST00000446317.1

SF3A3P1-201, Transcript of splicing factor 3a, subunit 3 pseudogene 1, humanhuman

BASIC

Gene SF3A3P1, Length 1,477 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3P1-201ENST00000446317 GP6Q9HCN6 339 aa6.6□□□□□ -1.35
SF3A3P1-201ENST00000446317 SLC17A5Q9NRA2 495 aa6.6□□□□□ -1.35
SF3A3P1-201ENST00000446317 SLCO1C1Q9NYB5 712 aa6.6□□□□□ -1.35
SF3A3P1-201ENST00000446317 NPAP1Q9NZP6 1156 aa6.6□□□□□ -1.35
SF3A3P1-201ENST00000446317 LAMP5Q9UJQ1 280 aa6.6□□□□□ -1.35
SF3A3P1-201ENST00000446317 GDF2Q9UK05 429 aaPredicted RBP6.6□□□□□ -1.35
SF3A3P1-201ENST00000446317 FZR1Q9UM11 496 aa6.6□□□□□ -1.35
SF3A3P1-201ENST00000446317 ZGRF1Q86YA3 2104 aa6.59□□□□□ -1.35
SF3A3P1-201ENST00000446317 DAPL1A0PJW8 107 aa6.59□□□□□ -1.36
SF3A3P1-201ENST00000446317 SLC22A31A6NKX4 558 aa6.59□□□□□ -1.36
SF3A3P1-201ENST00000446317 PRSS44E7EML9 344 aa6.59□□□□□ -1.36
SF3A3P1-201ENST00000446317 F5H5K5 113 aa6.59□□□□□ -1.36
SF3A3P1-201ENST00000446317 C16orf97H3BN30 126 aa6.59□□□□□ -1.36
SF3A3P1-201ENST00000446317 CLDN1O95832 211 aa6.59□□□□□ -1.36
SF3A3P1-201ENST00000446317 SBK2P0C263 348 aa6.59□□□□□ -1.36
SF3A3P1-201ENST00000446317 ATP6V1B1P15313 513 aa6.59□□□□□ -1.36
SF3A3P1-201ENST00000446317 COX5AP20674 150 aa6.59□□□□□ -1.36
SF3A3P1-201ENST00000446317 HOXC12P31275 282 aa6.59□□□□□ -1.36
SF3A3P1-201ENST00000446317 HTR5AP47898 357 aa6.59□□□□□ -1.36
SF3A3P1-201ENST00000446317 RAB1AP62820 205 aa6.59□□□□□ -1.36
SF3A3P1-201ENST00000446317 PSG4Q00888 419 aa6.59□□□□□ -1.36
SF3A3P1-201ENST00000446317 ZNF85Q03923 595 aa6.59□□□□□ -1.36
SF3A3P1-201ENST00000446317 ST3GAL4Q11206 333 aa6.59□□□□□ -1.36
SF3A3P1-201ENST00000446317 GTF3C1Q12789 2109 aa6.59□□□□□ -1.36
SF3A3P1-201ENST00000446317 TAF13Q15543 124 aa6.59□□□□□ -1.36
SF3A3P1-201ENST00000446317 SPATA46Q5T0L3 261 aa6.59□□□□□ -1.36
SF3A3P1-201ENST00000446317 SLC18B1Q6NT16 456 aa6.59□□□□□ -1.36
SF3A3P1-201ENST00000446317 VHLLQ6RSH7 139 aa6.59□□□□□ -1.36
SF3A3P1-201ENST00000446317 SLC16A9Q7RTY1 509 aa6.59□□□□□ -1.36
SF3A3P1-201ENST00000446317 ABHD12BQ7Z5M8 362 aaPredicted RBP6.59□□□□□ -1.36
SF3A3P1-201ENST00000446317 CPEB3Q8NE35 698 aaKnown RBP6.59□□□□□ -1.36
SF3A3P1-201ENST00000446317 OR10S1Q8NGN2 331 aa6.59□□□□□ -1.36
SF3A3P1-201ENST00000446317 TRUB1Q8WWH5 349 aaKnown RBP6.59□□□□□ -1.36
SF3A3P1-201ENST00000446317 NEUROG1Q92886 237 aa6.59□□□□□ -1.36
SF3A3P1-201ENST00000446317 RNASE6Q93091 150 aaKnown RBP6.59□□□□□ -1.36
SF3A3P1-201ENST00000446317 RFKQ969G6 155 aa6.59□□□□□ -1.36
SF3A3P1-201ENST00000446317 SLAMF6Q96DU3 332 aa6.59□□□□□ -1.36
SF3A3P1-201ENST00000446317 RADILQ96JH8 1075 aa6.59□□□□□ -1.36
SF3A3P1-201ENST00000446317 Q96MT0 163 aa6.59□□□□□ -1.36
SF3A3P1-201ENST00000446317 COPS4Q9BT78 406 aa6.59□□□□□ -1.36
SF3A3P1-201ENST00000446317 MED18Q9BUE0 208 aa6.59□□□□□ -1.36
SF3A3P1-201ENST00000446317 ABHD6Q9BV23 337 aa6.59□□□□□ -1.36
SF3A3P1-201ENST00000446317 SIAEQ9HAT2 523 aa6.59□□□□□ -1.36
SF3A3P1-201ENST00000446317 PLEK2Q9NYT0 353 aa6.59□□□□□ -1.36
SF3A3P1-201ENST00000446317 JKAMPQ9P055 326 aa6.59□□□□□ -1.36
SF3A3P1-201ENST00000446317 WARS2Q9UGM6 360 aaKnown RBP6.59□□□□□ -1.36
SF3A3P1-201ENST00000446317 PSORS1C1Q9UIG5 152 aa6.59□□□□□ -1.36
SF3A3P1-201ENST00000446317 GNG8Q9UK08 70 aa6.59□□□□□ -1.36
SF3A3P1-201ENST00000446317 LRRC42Q9Y546 428 aa6.59□□□□□ -1.36
SF3A3P1-201ENST00000446317 COL12A1Q99715 3063 aa6.58□□□□□ -1.36
SF3A3P1-201ENST00000446317 SPTA1P02549 2419 aa6.58□□□□□ -1.36
SF3A3P1-201ENST00000446317 IGHV1-18A0A0C4DH31 117 aa6.58□□□□□ -1.36
SF3A3P1-201ENST00000446317 C5orf49A4QMS7 147 aa6.58□□□□□ -1.36
SF3A3P1-201ENST00000446317 OR5H1A6NKK0 313 aa6.58□□□□□ -1.36
SF3A3P1-201ENST00000446317 E9PI62 339 aa6.58□□□□□ -1.36
SF3A3P1-201ENST00000446317 ZNF670-ZNF695F2Z2N8 137 aa6.58□□□□□ -1.36
SF3A3P1-201ENST00000446317 RPL36A-HNRNPH2H7BZ11 118 aa6.58□□□□□ -1.36
SF3A3P1-201ENST00000446317 MPZL2O60487 215 aa6.58□□□□□ -1.36
SF3A3P1-201ENST00000446317 FARS2O95363 451 aaKnown RBP6.58□□□□□ -1.36
SF3A3P1-201ENST00000446317 RAB36O95755 333 aa6.58□□□□□ -1.36
SF3A3P1-201ENST00000446317 HTR1AP08908 422 aa6.58□□□□□ -1.36
SF3A3P1-201ENST00000446317 FAM157BP0CG42 384 aa6.58□□□□□ -1.36
SF3A3P1-201ENST00000446317 CRHBPP24387 322 aa6.58□□□□□ -1.36
SF3A3P1-201ENST00000446317 OR12D2P58182 307 aa6.58□□□□□ -1.36
SF3A3P1-201ENST00000446317 MRPS34P82930 218 aaKnown RBP6.58□□□□□ -1.36
SF3A3P1-201ENST00000446317 HGFACQ04756 655 aa6.58□□□□□ -1.36
SF3A3P1-201ENST00000446317 TFF3Q07654 80 aa6.58□□□□□ -1.36
SF3A3P1-201ENST00000446317 MFGE8Q08431 387 aaPredicted RBP6.58□□□□□ -1.36
SF3A3P1-201ENST00000446317 PPA1Q15181 289 aa6.58□□□□□ -1.36
SF3A3P1-201ENST00000446317 GSG1Q2KHT4 349 aa6.58□□□□□ -1.36
SF3A3P1-201ENST00000446317 SLC25A35Q3KQZ1 300 aa6.58□□□□□ -1.36
SF3A3P1-201ENST00000446317 SLC35D3Q5M8T2 416 aa6.58□□□□□ -1.36
SF3A3P1-201ENST00000446317 MEDAGQ5VYS4 303 aa6.58□□□□□ -1.36
SF3A3P1-201ENST00000446317 VASH1Q7L8A9 365 aaPredicted RBP6.58□□□□□ -1.36
SF3A3P1-201ENST00000446317 CDC20BQ86Y33 519 aa6.58□□□□□ -1.36
SF3A3P1-201ENST00000446317 ZNF584Q8IVC4 421 aa6.58□□□□□ -1.36
SF3A3P1-201ENST00000446317 ZNF808Q8N4W9 903 aaPredicted RBP6.58□□□□□ -1.36
SF3A3P1-201ENST00000446317 YIPF7Q8N8F6 280 aa6.58□□□□□ -1.36
SF3A3P1-201ENST00000446317 SSC4DQ8WTU2 575 aa6.58□□□□□ -1.36
SF3A3P1-201ENST00000446317 FBLIM1Q8WUP2 373 aa6.58□□□□□ -1.36
SF3A3P1-201ENST00000446317 SPRYD4Q8WW59 207 aaPredicted RBP6.58□□□□□ -1.36
SF3A3P1-201ENST00000446317 GATAD2BQ8WXI9 593 aa6.58□□□□□ -1.36
SF3A3P1-201ENST00000446317 HSD17B8Q92506 261 aa6.58□□□□□ -1.36
SF3A3P1-201ENST00000446317 MARVELD3Q96A59 401 aa6.58□□□□□ -1.36
SF3A3P1-201ENST00000446317 SNX18Q96RF0 628 aa6.58□□□□□ -1.36
SF3A3P1-201ENST00000446317 OR2H1Q9GZK4 316 aa6.58□□□□□ -1.36
SF3A3P1-201ENST00000446317 KCNN2Q9H2S1 579 aa6.58□□□□□ -1.36
SF3A3P1-201ENST00000446317 POFUT1Q9H488 388 aa6.58□□□□□ -1.36
SF3A3P1-201ENST00000446317 ACOXLQ9NUZ1 547 aa6.58□□□□□ -1.36
SF3A3P1-201ENST00000446317 SCN3BQ9NY72 215 aa6.58□□□□□ -1.36
SF3A3P1-201ENST00000446317 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.58□□□□□ -1.36
SF3A3P1-201ENST00000446317 MOKQ9UQ07 419 aa6.58□□□□□ -1.36
SF3A3P1-201ENST00000446317 RPL36Q9Y3U8 105 aaKnown RBP6.58□□□□□ -1.36
SF3A3P1-201ENST00000446317 LOC100509620A0A075B734 347 aa6.57□□□□□ -1.36
SF3A3P1-201ENST00000446317 OR6C65A6NJZ3 312 aa6.57□□□□□ -1.36
SF3A3P1-201ENST00000446317 TBX1O43435 398 aa6.57□□□□□ -1.36
SF3A3P1-201ENST00000446317 SGCEO43556 437 aa6.57□□□□□ -1.36
SF3A3P1-201ENST00000446317 PLAUP00749 431 aa6.57□□□□□ -1.36
SF3A3P1-201ENST00000446317 PTHP01270 115 aa6.57□□□□□ -1.36
SF3A3P1-201ENST00000446317 LCKP06239 509 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms