RNA–Protein interactions for RNA: ENST00000446312.5

DDR1-238, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 5 BASIC

Gene DDR1, Length 3,202 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-238	ENST00000446312	BMF	Q96LC9	184 aa		11.33	□□□□□ -0.6
DDR1-238	ENST00000446312	DGAT2	Q96PD7	388 aa		11.33	□□□□□ -0.6
DDR1-238	ENST00000446312	COMMD4	Q9H0A8	199 aa		11.33	□□□□□ -0.6
DDR1-238	ENST00000446312	DUSP22	Q9NRW4	184 aa		11.33	□□□□□ -0.6
DDR1-238	ENST00000446312	PPP1R14D	Q9NXH3	145 aa		11.33	□□□□□ -0.6
DDR1-238	ENST00000446312	DHCR7	Q9UBM7	475 aa	Known RBP	11.33	□□□□□ -0.6
DDR1-238	ENST00000446312	FADS1	O60427	444 aa		11.32	□□□□□ -0.6
DDR1-238	ENST00000446312	FARS2	O95363	451 aa	Known RBP	11.32	□□□□□ -0.6
DDR1-238	ENST00000446312	FOSL2	P15408	326 aa		11.32	□□□□□ -0.6
DDR1-238	ENST00000446312	C5AR1	P21730	350 aa		11.32	□□□□□ -0.6
DDR1-238	ENST00000446312	UBE2I	P63279	158 aa	Known RBP	11.32	□□□□□ -0.6
DDR1-238	ENST00000446312	RIPPLY1	Q0D2K3	151 aa		11.32	□□□□□ -0.6
DDR1-238	ENST00000446312	GPM6B	Q13491	265 aa		11.32	□□□□□ -0.6
DDR1-238	ENST00000446312	TRAM1	Q15629	374 aa		11.32	□□□□□ -0.6
DDR1-238	ENST00000446312	LINC01590	Q5TEZ4	76 aa		11.32	□□□□□ -0.6
DDR1-238	ENST00000446312	C1orf189	Q5VU69	101 aa		11.32	□□□□□ -0.6
DDR1-238	ENST00000446312	SLC35F3	Q8IY50	421 aa		11.32	□□□□□ -0.6
DDR1-238	ENST00000446312	EMC6	Q9BV81	110 aa		11.32	□□□□□ -0.6
DDR1-238	ENST00000446312	AHCTF1	Q8WYP5	2266 aa		11.32	□□□□□ -0.6
DDR1-238	ENST00000446312		A0A0B4J2A0	478 aa		11.32	□□□□□ -0.6
DDR1-238	ENST00000446312		A0A1B0GW55	424 aa		11.32	□□□□□ -0.6
DDR1-238	ENST00000446312	ZNF705E	A8MWA4	302 aa	Predicted RBP	11.32	□□□□□ -0.6
DDR1-238	ENST00000446312	CTAG2	O75638	210 aa		11.32	□□□□□ -0.6
DDR1-238	ENST00000446312	GLS	O94925	669 aa	Predicted RBP	11.32	□□□□□ -0.6
DDR1-238	ENST00000446312	FGF2	P09038	288 aa		11.32	□□□□□ -0.6
DDR1-238	ENST00000446312	FBP1	P09467	338 aa		11.32	□□□□□ -0.6
DDR1-238	ENST00000446312	DUX4L2	P0CJ85	424 aa		11.32	□□□□□ -0.6
DDR1-238	ENST00000446312	DUX4L3	P0CJ86	424 aa		11.32	□□□□□ -0.6
DDR1-238	ENST00000446312	DUX4L4	P0CJ87	422 aa		11.32	□□□□□ -0.6
DDR1-238	ENST00000446312	DUX4L5	P0CJ88	424 aa		11.32	□□□□□ -0.6
DDR1-238	ENST00000446312	DUX4L6	P0CJ89	424 aa		11.32	□□□□□ -0.6
DDR1-238	ENST00000446312	DUX4L7	P0CJ90	424 aa		11.32	□□□□□ -0.6
DDR1-238	ENST00000446312	CTSE	P14091	401 aa		11.32	□□□□□ -0.6
DDR1-238	ENST00000446312	CD53	P19397	219 aa		11.32	□□□□□ -0.6
DDR1-238	ENST00000446312	IL11	P20809	199 aa		11.32	□□□□□ -0.6
DDR1-238	ENST00000446312	SRSF3	P84103	164 aa	Known RBP	11.32	□□□□□ -0.6
DDR1-238	ENST00000446312	ILF3	Q12906	894 aa	Known RBP eCLIP	11.32	□□□□□ -0.6
DDR1-238	ENST00000446312	COTL1	Q14019	142 aa		11.32	□□□□□ -0.6
DDR1-238	ENST00000446312	ALG11	Q2TAA5	492 aa		11.32	□□□□□ -0.6
DDR1-238	ENST00000446312	OLFML2A	Q68BL7	652 aa		11.32	□□□□□ -0.6
DDR1-238	ENST00000446312	CLEC9A	Q6UXN8	241 aa		11.32	□□□□□ -0.6
DDR1-238	ENST00000446312	BHLHE23	Q8NDY6	225 aa		11.32	□□□□□ -0.6
DDR1-238	ENST00000446312	OR5D18	Q8NGL1	313 aa		11.32	□□□□□ -0.6
DDR1-238	ENST00000446312	CCDC74A	Q96AQ1	378 aa		11.32	□□□□□ -0.6
DDR1-238	ENST00000446312	MRPS24	Q96EL2	167 aa	Known RBP	11.32	□□□□□ -0.6
DDR1-238	ENST00000446312	C7orf50	Q9BRJ6	194 aa	Known RBP	11.32	□□□□□ -0.6
DDR1-238	ENST00000446312	INPP5E	Q9NRR6	644 aa		11.32	□□□□□ -0.6
DDR1-238	ENST00000446312	PTTG3P	Q9NZH4	202 aa		11.32	□□□□□ -0.6
DDR1-238	ENST00000446312	DUX4	Q9UBX2	424 aa		11.32	□□□□□ -0.6
DDR1-238	ENST00000446312	SHPK	Q9UHJ6	478 aa		11.32	□□□□□ -0.6
DDR1-238	ENST00000446312	EMC9	Q9Y3B6	208 aa		11.32	□□□□□ -0.6
DDR1-238	ENST00000446312	FAM96B	Q9Y3D0	163 aa		11.32	□□□□□ -0.6
DDR1-238	ENST00000446312	TMEM184B	Q9Y519	407 aa	Predicted RBP	11.32	□□□□□ -0.6
DDR1-238	ENST00000446312	GGT3P	A6NGU5	568 aa		11.31	□□□□□ -0.6
DDR1-238	ENST00000446312	SERINC4	A6NH21	518 aa		11.31	□□□□□ -0.6
DDR1-238	ENST00000446312	GALR3	O60755	368 aa	Predicted RBP	11.31	□□□□□ -0.6
DDR1-238	ENST00000446312	UPK3A	O75631	287 aa		11.31	□□□□□ -0.6
DDR1-238	ENST00000446312	GLCE	O94923	617 aa		11.31	□□□□□ -0.6
DDR1-238	ENST00000446312	GIP	P09681	153 aa	Predicted RBP	11.31	□□□□□ -0.6
DDR1-238	ENST00000446312	CXADR	P78310	365 aa		11.31	□□□□□ -0.6
DDR1-238	ENST00000446312	ADAM8	P78325	824 aa		11.31	□□□□□ -0.6
DDR1-238	ENST00000446312	ZP2	Q05996	745 aa		11.31	□□□□□ -0.6
DDR1-238	ENST00000446312	MEST	Q5EB52	335 aa		11.31	□□□□□ -0.6
DDR1-238	ENST00000446312	PRAMEF8	Q5VWM4	474 aa		11.31	□□□□□ -0.6
DDR1-238	ENST00000446312	PRAMEF7	Q5VXH5	474 aa		11.31	□□□□□ -0.6
DDR1-238	ENST00000446312	OOSP2	Q86WS3	158 aa		11.31	□□□□□ -0.6
DDR1-238	ENST00000446312	TAAR8	Q969N4	342 aa		11.31	□□□□□ -0.6
DDR1-238	ENST00000446312	MIB2	Q96AX9	1013 aa		11.31	□□□□□ -0.6
DDR1-238	ENST00000446312	UCK1	Q9HA47	277 aa		11.31	□□□□□ -0.6
DDR1-238	ENST00000446312	EXOSC3	Q9NQT5	275 aa	Known RBP	11.31	□□□□□ -0.6
DDR1-238	ENST00000446312	PRTFDC1	Q9NRG1	225 aa		11.31	□□□□□ -0.6
DDR1-238	ENST00000446312	PIAS3	Q9Y6X2	628 aa		11.31	□□□□□ -0.6
DDR1-238	ENST00000446312	IGKV1D-42	A0A075B6H8	117 aa		11.31	□□□□□ -0.6
DDR1-238	ENST00000446312	TMEM82	A0PJX8	343 aa		11.31	□□□□□ -0.6
DDR1-238	ENST00000446312	HLA-DOB	P13765	273 aa		11.31	□□□□□ -0.6
DDR1-238	ENST00000446312	ZNF10	P21506	573 aa	Predicted RBP	11.31	□□□□□ -0.6
DDR1-238	ENST00000446312	LAP3	P28838	519 aa		11.31	□□□□□ -0.6
DDR1-238	ENST00000446312	GUCA2B	Q16661	112 aa		11.31	□□□□□ -0.6
DDR1-238	ENST00000446312	BPIFB2	Q8N4F0	458 aa		11.31	□□□□□ -0.6
DDR1-238	ENST00000446312	OR10H5	Q8NGA6	315 aa		11.31	□□□□□ -0.6
DDR1-238	ENST00000446312	METTL21A	Q8WXB1	218 aa		11.31	□□□□□ -0.6
DDR1-238	ENST00000446312	TSPAN32	Q96QS1	320 aa		11.31	□□□□□ -0.6
DDR1-238	ENST00000446312	NXF5	Q9H1B4	397 aa	Known RBP	11.31	□□□□□ -0.6
DDR1-238	ENST00000446312	UNKL	Q9H9P5	680 aa	Known RBP	11.31	□□□□□ -0.6
DDR1-238	ENST00000446312	ST6GALNAC1	Q9NSC7	600 aa	Predicted RBP	11.31	□□□□□ -0.6
DDR1-238	ENST00000446312	AKAP7	Q9P0M2	348 aa	Predicted RBP	11.31	□□□□□ -0.6
DDR1-238	ENST00000446312	GSKIP	Q9P0R6	139 aa		11.31	□□□□□ -0.6
DDR1-238	ENST00000446312	KCNK7	Q9Y2U2	307 aa		11.31	□□□□□ -0.6
DDR1-238	ENST00000446312	NBEA	Q8NFP9	2946 aa		11.31	□□□□□ -0.6
DDR1-238	ENST00000446312	DMD	P11532	3685 aa		11.31	□□□□□ -0.6
DDR1-238	ENST00000446312	NUP210	Q8TEM1	1887 aa	Predicted RBP	11.31	□□□□□ -0.6
DDR1-238	ENST00000446312	OR2AT4	A6NND4	320 aa		11.31	□□□□□ -0.6
DDR1-238	ENST00000446312	XKRY	O14609	159 aa		11.31	□□□□□ -0.6
DDR1-238	ENST00000446312	MST1	P26927	711 aa		11.31	□□□□□ -0.6
DDR1-238	ENST00000446312	KIR3DL2	P43630	455 aa		11.31	□□□□□ -0.6
DDR1-238	ENST00000446312	GMFB	P60983	142 aa		11.31	□□□□□ -0.6
DDR1-238	ENST00000446312	SPCS3	P61009	180 aa		11.31	□□□□□ -0.6
DDR1-238	ENST00000446312	FABP9	Q0Z7S8	132 aa		11.31	□□□□□ -0.6
DDR1-238	ENST00000446312	SLC9A3R2	Q15599	337 aa		11.31	□□□□□ -0.6
DDR1-238	ENST00000446312	MAJIN	Q3KP22	176 aa		11.31	□□□□□ -0.6

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