RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 FKBP2P26885 142 aaKnown RBP15.09■□□□□ 0.01
TCOF1-206ENST00000445265 OTX2P32243 289 aa15.09■□□□□ 0.01
TCOF1-206ENST00000445265 CX3CR1P49238 355 aa15.09■□□□□ 0.01
TCOF1-206ENST00000445265 AFF3P51826 1226 aaKnown RBP15.09■□□□□ 0.01
TCOF1-206ENST00000445265 RPS15P62841 145 aaKnown RBP15.09■□□□□ 0.01
TCOF1-206ENST00000445265 RPL19P84098 196 aaKnown RBP15.09■□□□□ 0.01
TCOF1-206ENST00000445265 DUSP2Q05923 314 aa15.09■□□□□ 0.01
TCOF1-206ENST00000445265 ZNF100Q8IYN0 542 aa15.09■□□□□ 0.01
TCOF1-206ENST00000445265 OR5D18Q8NGL1 313 aa15.09■□□□□ 0.01
TCOF1-206ENST00000445265 ABHD6Q9BV23 337 aa15.09■□□□□ 0.01
TCOF1-206ENST00000445265 LUZP4Q9P127 313 aa15.09■□□□□ 0.01
TCOF1-206ENST00000445265 CCSO14618 274 aa15.08■□□□□ 0.01
TCOF1-206ENST00000445265 EIF1BO60739 113 aaKnown RBP15.08■□□□□ 0.01
TCOF1-206ENST00000445265 TBXA2RP21731 343 aa15.08■□□□□ 0.01
TCOF1-206ENST00000445265 SHHQ15465 462 aa15.08■□□□□ 0.01
TCOF1-206ENST00000445265 MAMSTRQ6ZN01 415 aa15.08■□□□□ 0.01
TCOF1-206ENST00000445265 KTI12Q96EK9 354 aaPredicted RBP15.08■□□□□ 0.01
TCOF1-206ENST00000445265 PLA2G2FQ9BZM2 168 aa15.08■□□□□ 0.01
TCOF1-206ENST00000445265 MTFP1Q9UDX5 166 aa15.08■□□□□ 0.01
TCOF1-206ENST00000445265 EDARQ9UNE0 448 aa15.08■□□□□ 0.01
TCOF1-206ENST00000445265 OR2W5A6NFC9 320 aa15.08■□□□□ 0
TCOF1-206ENST00000445265 FBXO24O75426 580 aa15.08■□□□□ 0
TCOF1-206ENST00000445265 EFNA3P52797 238 aa15.08■□□□□ 0
TCOF1-206ENST00000445265 EXOSC6Q5RKV6 272 aaKnown RBP15.08■□□□□ 0
TCOF1-206ENST00000445265 AKR1C8PQ5T2L2 129 aa15.08■□□□□ 0
TCOF1-206ENST00000445265 SPICQ8N5J4 248 aa15.08■□□□□ 0
TCOF1-206ENST00000445265 LSMEM1Q8N8F7 131 aa15.08■□□□□ 0
TCOF1-206ENST00000445265 LRRC3BQ96PB8 259 aa15.08■□□□□ 0
TCOF1-206ENST00000445265 SMIM3Q9BZL3 60 aa15.08■□□□□ 0
TCOF1-206ENST00000445265 WIF1Q9Y5W5 379 aa15.08■□□□□ 0
TCOF1-206ENST00000445265 DDAH2O95865 285 aa15.08■□□□□ 0
TCOF1-206ENST00000445265 ECI1P42126 302 aa15.08■□□□□ 0
TCOF1-206ENST00000445265 RHOUQ7L0Q8 258 aa15.08■□□□□ 0
TCOF1-206ENST00000445265 DOK3Q7L591 496 aa15.08■□□□□ 0
TCOF1-206ENST00000445265 EMC6Q9BV81 110 aa15.08■□□□□ 0
TCOF1-206ENST00000445265 ZNF286AQ9HBT8 521 aa15.08■□□□□ 0
TCOF1-206ENST00000445265 RPS10P5Q9NQ39 176 aa15.08■□□□□ 0
TCOF1-206ENST00000445265 NEUROG3Q9Y4Z2 214 aa15.08■□□□□ 0
TCOF1-206ENST00000445265 NYNRINQ9P2P1 1898 aaKnown RBP15.08■□□□□ 0
TCOF1-206ENST00000445265 C2orf72A6NCS6 295 aa15.08■□□□□ 0
TCOF1-206ENST00000445265 PRICKLE3O43900 615 aaPredicted RBP15.08■□□□□ 0
TCOF1-206ENST00000445265 IFNA2P01563 188 aa15.08■□□□□ 0
TCOF1-206ENST00000445265 GFERP55789 205 aa15.08■□□□□ 0
TCOF1-206ENST00000445265 CPEB4Q17RY0 729 aaKnown RBP eCLIP15.08■□□□□ 0
TCOF1-206ENST00000445265 PRTGQ2VWP7 1150 aa15.08■□□□□ 0
TCOF1-206ENST00000445265 NPSR1Q6W5P4 371 aa15.08■□□□□ 0
TCOF1-206ENST00000445265 PRSS35Q8N3Z0 413 aa15.08■□□□□ 0
TCOF1-206ENST00000445265 ZNF709Q8N972 641 aa15.08■□□□□ 0
TCOF1-206ENST00000445265 RRNAD1Q96FB5 475 aaKnown RBP15.08■□□□□ 0
TCOF1-206ENST00000445265 C4orf45Q96LM5 186 aa15.08■□□□□ 0
TCOF1-206ENST00000445265 ZNF416Q9BWM5 594 aa15.08■□□□□ 0
TCOF1-206ENST00000445265 CRISPLD2Q9H0B8 497 aa15.08■□□□□ 0
TCOF1-206ENST00000445265 BIN3Q9NQY0 253 aa15.08■□□□□ 0
TCOF1-206ENST00000445265 FLRT3Q9NZU0 649 aa15.08■□□□□ 0
TCOF1-206ENST00000445265 KCNS2Q9ULS6 477 aa15.08■□□□□ 0
TCOF1-206ENST00000445265 NPY4RP50391 375 aa15.07■□□□□ 0
TCOF1-206ENST00000445265 ZNF136P52737 540 aa15.07■□□□□ 0
TCOF1-206ENST00000445265 CRYBA2P53672 197 aa15.07■□□□□ 0
TCOF1-206ENST00000445265 LYSMD4Q5XG99 296 aa15.07■□□□□ 0
TCOF1-206ENST00000445265 CHRDL2Q6WN34 429 aa15.07■□□□□ 0
TCOF1-206ENST00000445265 MEX3BQ6ZN04 569 aaKnown RBP15.07■□□□□ 0
TCOF1-206ENST00000445265 GJC3Q8NFK1 279 aa15.07■□□□□ 0
TCOF1-206ENST00000445265 GPBAR1Q8TDU6 330 aa15.07■□□□□ 0
TCOF1-206ENST00000445265 OR6C1Q96RD1 312 aa15.07■□□□□ 0
TCOF1-206ENST00000445265 B3GALT5Q9Y2C3 310 aa15.07■□□□□ 0
TCOF1-206ENST00000445265 TNFSF14O43557 240 aa15.07■□□□□ 0
TCOF1-206ENST00000445265 IFNA1P01562 189 aa15.07■□□□□ 0
TCOF1-206ENST00000445265 SNTB1Q13884 538 aaKnown RBP15.07■□□□□ 0
TCOF1-206ENST00000445265 NKAIN1Q4KMZ8 207 aa15.07■□□□□ 0
TCOF1-206ENST00000445265 PRAMEF20Q5VT98 475 aa15.07■□□□□ 0
TCOF1-206ENST00000445265 TMEM229BQ8NBD8 167 aa15.07■□□□□ 0
TCOF1-206ENST00000445265 OR52B4Q8NGK2 314 aa15.07■□□□□ 0
TCOF1-206ENST00000445265 NXT1Q9UKK6 140 aaKnown RBP15.07■□□□□ 0
TCOF1-206ENST00000445265 PATJQ8NI35 1801 aa15.07■□□□□ 0
TCOF1-206ENST00000445265 A0A1B0GV50 99 aa15.07■□□□□ 0
TCOF1-206ENST00000445265 HMGB3O15347 200 aaKnown RBP15.07■□□□□ 0
TCOF1-206ENST00000445265 MGMTP16455 207 aa15.07■□□□□ 0
TCOF1-206ENST00000445265 GABRG2P18507 467 aa15.07■□□□□ 0
TCOF1-206ENST00000445265 ZNF169Q14929 603 aaPredicted RBP15.07■□□□□ 0
TCOF1-206ENST00000445265 PXDC1Q5TGL8 231 aa15.07■□□□□ 0
TCOF1-206ENST00000445265 CD200R1LQ6Q8B3 271 aa15.07■□□□□ 0
TCOF1-206ENST00000445265 MRPL21Q7Z2W9 205 aaKnown RBP15.07■□□□□ 0
TCOF1-206ENST00000445265 TSEN54Q7Z6J9 526 aaKnown RBP15.07■□□□□ 0
TCOF1-206ENST00000445265 ST8SIA4Q92187 359 aa15.07■□□□□ 0
TCOF1-206ENST00000445265 UBL7Q96S82 380 aaPredicted RBP15.07■□□□□ 0
TCOF1-206ENST00000445265 GABRG3Q99928 467 aa15.07■□□□□ 0
TCOF1-206ENST00000445265 LHX9Q9NQ69 397 aa15.07■□□□□ 0
TCOF1-206ENST00000445265 FAM212BQ9NTI7 297 aaPredicted RBP15.07■□□□□ 0
TCOF1-206ENST00000445265 CDKN2AP42771 156 aaKnown RBP15.06■□□□□ 0
TCOF1-206ENST00000445265 AKR1C2P52895 323 aa15.06■□□□□ 0
TCOF1-206ENST00000445265 OIT3Q8WWZ8 545 aa15.06■□□□□ 0
TCOF1-206ENST00000445265 TCEAL2Q9H3H9 227 aaPredicted RBP15.06■□□□□ 0
TCOF1-206ENST00000445265 WDR90Q96KV7 1748 aa15.06■□□□□ 0
TCOF1-206ENST00000445265 IGHV3-20A0A0C4DH32 117 aa15.06■□□□□ 0
TCOF1-206ENST00000445265 DPP4P27487 766 aa15.06■□□□□ 0
TCOF1-206ENST00000445265 THEM4Q5T1C6 240 aa15.06■□□□□ 0
TCOF1-206ENST00000445265 SIGIRRQ6IA17 410 aa15.06■□□□□ 0
TCOF1-206ENST00000445265 CDCP1Q9H5V8 836 aa15.06■□□□□ 0
TCOF1-206ENST00000445265 NSG1A0A0A6YYJ2 146 aa15.06■□□□□ 0
TCOF1-206ENST00000445265 PRAMEF27A3QJZ7 478 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms