RNA–Protein interactions for RNA: ENST00000444983.6

CCNE1-203, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-203ENST00000444983 MYDGFQ969H8 173 aa13.2□□□□□ -0.3
CCNE1-203ENST00000444983 ABHD6Q9BV23 337 aa13.2□□□□□ -0.3
CCNE1-203ENST00000444983 OR10A4Q9H209 315 aa13.2□□□□□ -0.3
CCNE1-203ENST00000444983 CCNB1IP1Q9NPC3 277 aa13.2□□□□□ -0.3
CCNE1-203ENST00000444983 PNRC2Q9NPJ4 139 aaKnown RBP13.2□□□□□ -0.3
CCNE1-203ENST00000444983 SLC17A5Q9NRA2 495 aa13.2□□□□□ -0.3
CCNE1-203ENST00000444983 INPP5EQ9NRR6 644 aa13.2□□□□□ -0.3
CCNE1-203ENST00000444983 ERVK13-1Q9NX77 482 aa13.2□□□□□ -0.3
CCNE1-203ENST00000444983 ERVK-18Q9QC07 812 aa13.2□□□□□ -0.3
CCNE1-203ENST00000444983 GDF2Q9UK05 429 aaPredicted RBP13.2□□□□□ -0.3
CCNE1-203ENST00000444983 TMEM14AQ9Y6G1 99 aa13.2□□□□□ -0.3
CCNE1-203ENST00000444983 NKX2-6A6NCS4 301 aa13.19□□□□□ -0.3
CCNE1-203ENST00000444983 RER1O15258 196 aa13.19□□□□□ -0.3
CCNE1-203ENST00000444983 MRPS14O60783 128 aaKnown RBP13.19□□□□□ -0.3
CCNE1-203ENST00000444983 TMCC2O75069 709 aa13.19□□□□□ -0.3
CCNE1-203ENST00000444983 HLA-HP01893 362 aa13.19□□□□□ -0.3
CCNE1-203ENST00000444983 PATE4P0C8F1 98 aa13.19□□□□□ -0.3
CCNE1-203ENST00000444983 ZNF32P17041 273 aa13.19□□□□□ -0.3
CCNE1-203ENST00000444983 IRF3Q14653 427 aa13.19□□□□□ -0.3
CCNE1-203ENST00000444983 SLC36A2Q495M3 483 aa13.19□□□□□ -0.3
CCNE1-203ENST00000444983 TIMM23BQ5SRD1 257 aa13.19□□□□□ -0.3
CCNE1-203ENST00000444983 C1QTNF12Q5T7M4 302 aa13.19□□□□□ -0.3
CCNE1-203ENST00000444983 CFAP77Q6ZQR2 320 aa13.19□□□□□ -0.3
CCNE1-203ENST00000444983 DCXRQ7Z4W1 244 aa13.19□□□□□ -0.3
CCNE1-203ENST00000444983 DPPA2Q7Z7J5 298 aa13.19□□□□□ -0.3
CCNE1-203ENST00000444983 P2RY8Q86VZ1 359 aa13.19□□□□□ -0.3
CCNE1-203ENST00000444983 GJC3Q8NFK1 279 aa13.19□□□□□ -0.3
CCNE1-203ENST00000444983 OR10H4Q8NGA5 316 aa13.19□□□□□ -0.3
CCNE1-203ENST00000444983 S100PBPQ96BU1 408 aa13.19□□□□□ -0.3
CCNE1-203ENST00000444983 CDADC1Q9BWV3 514 aa13.19□□□□□ -0.3
CCNE1-203ENST00000444983 NOX3Q9HBY0 568 aa13.19□□□□□ -0.3
CCNE1-203ENST00000444983 OBP2BQ9NPH6 170 aa13.19□□□□□ -0.3
CCNE1-203ENST00000444983 KCNJ16Q9NPI9 418 aa13.19□□□□□ -0.3
CCNE1-203ENST00000444983 TIMM10BQ9Y5J6 103 aa13.19□□□□□ -0.3
CCNE1-203ENST00000444983 PRR14LQ5THK1 2151 aa13.19□□□□□ -0.3
CCNE1-203ENST00000444983 FAM90A27PA6NNH2 459 aa13.18□□□□□ -0.3
CCNE1-203ENST00000444983 C16orf97H3BN30 126 aa13.18□□□□□ -0.3
CCNE1-203ENST00000444983 PYCARD-AS1I3L0S3 204 aa13.18□□□□□ -0.3
CCNE1-203ENST00000444983 RGS10O43665 173 aa13.18□□□□□ -0.3
CCNE1-203ENST00000444983 CLDN14O95500 239 aa13.18□□□□□ -0.3
CCNE1-203ENST00000444983 WNT11O96014 354 aa13.18□□□□□ -0.3
CCNE1-203ENST00000444983 LYNP07948 512 aa13.18□□□□□ -0.3
CCNE1-203ENST00000444983 PLA2G2AP14555 144 aa13.18□□□□□ -0.3
CCNE1-203ENST00000444983 ETV1P50549 477 aa13.18□□□□□ -0.3
CCNE1-203ENST00000444983 PCBD1P61457 104 aa13.18□□□□□ -0.3
CCNE1-203ENST00000444983 PSG4Q00888 419 aa13.18□□□□□ -0.3
CCNE1-203ENST00000444983 ROM1Q03395 351 aa13.18□□□□□ -0.3
CCNE1-203ENST00000444983 GALEQ14376 348 aa13.18□□□□□ -0.3
CCNE1-203ENST00000444983 CCDC92Q53HC0 331 aaPredicted RBP13.18□□□□□ -0.3
CCNE1-203ENST00000444983 STX19Q8N4C7 294 aa13.18□□□□□ -0.3
CCNE1-203ENST00000444983 ZNF485Q8NCK3 441 aa13.18□□□□□ -0.3
CCNE1-203ENST00000444983 STEAP2Q8NFT2 490 aa13.18□□□□□ -0.3
CCNE1-203ENST00000444983 RNF133Q8WVZ7 376 aa13.18□□□□□ -0.3
CCNE1-203ENST00000444983 RNASE6Q93091 150 aaKnown RBP13.18□□□□□ -0.3
CCNE1-203ENST00000444983 USB1Q9BQ65 265 aaKnown RBP13.18□□□□□ -0.3
CCNE1-203ENST00000444983 OR2H1Q9GZK4 316 aa13.18□□□□□ -0.3
CCNE1-203ENST00000444983 C1orf198Q9H425 327 aa13.18□□□□□ -0.3
CCNE1-203ENST00000444983 CLEC2DQ9UHP7 191 aa13.18□□□□□ -0.3
CCNE1-203ENST00000444983 LAMP5Q9UJQ1 280 aa13.18□□□□□ -0.3
CCNE1-203ENST00000444983 RTTNQ86VV8 2226 aa13.18□□□□□ -0.3
CCNE1-203ENST00000444983 CLEC18AA5D8T8 446 aa13.18□□□□□ -0.3
CCNE1-203ENST00000444983 UBL3O95164 117 aa13.18□□□□□ -0.3
CCNE1-203ENST00000444983 IL32P24001 234 aa13.18□□□□□ -0.3
CCNE1-203ENST00000444983 CDH15P55291 814 aa13.18□□□□□ -0.3
CCNE1-203ENST00000444983 RAB1AP62820 205 aa13.18□□□□□ -0.3
CCNE1-203ENST00000444983 EGR3Q06889 387 aa13.18□□□□□ -0.3
CCNE1-203ENST00000444983 EIF2B1Q14232 305 aaKnown RBP13.18□□□□□ -0.3
CCNE1-203ENST00000444983 CDONQ4KMG0 1287 aa13.18□□□□□ -0.3
CCNE1-203ENST00000444983 SEZ6L2Q6UXD5 910 aa13.18□□□□□ -0.3
CCNE1-203ENST00000444983 CLEC18BQ6UXF7 455 aa13.18□□□□□ -0.3
CCNE1-203ENST00000444983 LHFPL3Q86UP9 236 aa13.18□□□□□ -0.3
CCNE1-203ENST00000444983 EGFL6Q8IUX8 553 aa13.18□□□□□ -0.3
CCNE1-203ENST00000444983 ZNF584Q8IVC4 421 aa13.18□□□□□ -0.3
CCNE1-203ENST00000444983 CLEC18CQ8NCF0 446 aa13.18□□□□□ -0.3
CCNE1-203ENST00000444983 OR52N5Q8NH56 324 aa13.18□□□□□ -0.3
CCNE1-203ENST00000444983 ASB17Q8WXJ9 295 aa13.18□□□□□ -0.3
CCNE1-203ENST00000444983 TBX5Q99593 518 aa13.18□□□□□ -0.3
CCNE1-203ENST00000444983 ACTR6Q9GZN1 396 aa13.18□□□□□ -0.3
CCNE1-203ENST00000444983 WNT5BQ9H1J7 359 aa13.18□□□□□ -0.3
CCNE1-203ENST00000444983 DDX28Q9NUL7 540 aaKnown RBP13.18□□□□□ -0.3
CCNE1-203ENST00000444983 EXOSC1Q9Y3B2 195 aaKnown RBP13.18□□□□□ -0.3
CCNE1-203ENST00000444983 SLC25A15Q9Y619 301 aa13.18□□□□□ -0.3
CCNE1-203ENST00000444983 TMEM129A0AVI4 362 aa13.17□□□□□ -0.3
CCNE1-203ENST00000444983 DAPL1A0PJW8 107 aa13.17□□□□□ -0.3
CCNE1-203ENST00000444983 TRIM64CA6NLI5 447 aa13.17□□□□□ -0.3
CCNE1-203ENST00000444983 PHYHO14832 338 aa13.17□□□□□ -0.3
CCNE1-203ENST00000444983 SYNGR3O43761 229 aa13.17□□□□□ -0.3
CCNE1-203ENST00000444983 IGKV3-15P01624 115 aa13.17□□□□□ -0.3
CCNE1-203ENST00000444983 MT-ND2P03891 347 aa13.17□□□□□ -0.3
CCNE1-203ENST00000444983 EEF1B2P24534 225 aaKnown RBP13.17□□□□□ -0.3
CCNE1-203ENST00000444983 ARR3P36575 388 aa13.17□□□□□ -0.3
CCNE1-203ENST00000444983 TUBA1BP68363 451 aa13.17□□□□□ -0.3
CCNE1-203ENST00000444983 TUBA4AP68366 448 aa13.17□□□□□ -0.3
CCNE1-203ENST00000444983 SCRN3Q0VDG4 424 aa13.17□□□□□ -0.3
CCNE1-203ENST00000444983 TAB1Q15750 504 aa13.17□□□□□ -0.3
CCNE1-203ENST00000444983 RSPO1Q2MKA7 263 aaPredicted RBP13.17□□□□□ -0.3
CCNE1-203ENST00000444983 ZNF322Q6U7Q0 402 aaPredicted RBP13.17□□□□□ -0.3
CCNE1-203ENST00000444983 TUBA1AQ71U36 451 aa13.17□□□□□ -0.3
CCNE1-203ENST00000444983 FAM169BQ8N8A8 192 aa13.17□□□□□ -0.3
CCNE1-203ENST00000444983 CPEB3Q8NE35 698 aaKnown RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms