RNA–Protein interactions for RNA: ENST00000444237.2

SCN11A-202, Transcript of sodium voltage-gated channel alpha subunit 11, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SCN11A, Length 5,729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11A-202ENST00000444237 OR4B1Q8NGF8 309 aa4.72□□□□□ -1.65
SCN11A-202ENST00000444237 SLC38A5Q8WUX1 472 aa4.72□□□□□ -1.65
SCN11A-202ENST00000444237 HOXB13Q92826 284 aaPredicted RBP4.72□□□□□ -1.65
SCN11A-202ENST00000444237 MRPL37Q9BZE1 423 aaKnown RBP4.72□□□□□ -1.65
SCN11A-202ENST00000444237 RAB18Q9NP72 206 aa4.72□□□□□ -1.65
SCN11A-202ENST00000444237 MARCH5Q9NX47 278 aa4.72□□□□□ -1.65
SCN11A-202ENST00000444237 DHCR7Q9UBM7 475 aaKnown RBP4.72□□□□□ -1.65
SCN11A-202ENST00000444237 FOXJ3Q9UPW0 622 aa4.72□□□□□ -1.65
SCN11A-202ENST00000444237 B3GALT5Q9Y2C3 310 aa4.72□□□□□ -1.65
SCN11A-202ENST00000444237 IER3IP1Q9Y5U9 82 aa4.72□□□□□ -1.65
SCN11A-202ENST00000444237 TRAV34A0A0B4J273 112 aa4.72□□□□□ -1.65
SCN11A-202ENST00000444237 A0A0G2JN53 185 aa4.72□□□□□ -1.65
SCN11A-202ENST00000444237 SOWAHBA6NEL2 793 aa4.72□□□□□ -1.65
SCN11A-202ENST00000444237 PRKRAO75569 313 aaKnown RBP4.72□□□□□ -1.65
SCN11A-202ENST00000444237 GLSO94925 669 aaPredicted RBP4.72□□□□□ -1.65
SCN11A-202ENST00000444237 ATF1P18846 271 aa4.72□□□□□ -1.65
SCN11A-202ENST00000444237 DUSP1P28562 367 aa4.72□□□□□ -1.65
SCN11A-202ENST00000444237 CHRNB4P30926 498 aa4.72□□□□□ -1.65
SCN11A-202ENST00000444237 CSNK1A1P48729 337 aa4.72□□□□□ -1.65
SCN11A-202ENST00000444237 ARRB1P49407 418 aaPredicted RBP4.72□□□□□ -1.65
SCN11A-202ENST00000444237 SIGLEC14Q08ET2 396 aa4.72□□□□□ -1.65
SCN11A-202ENST00000444237 DUSP28Q4G0W2 176 aa4.72□□□□□ -1.65
SCN11A-202ENST00000444237 ARSJQ5FYB0 599 aaPredicted RBP4.72□□□□□ -1.65
SCN11A-202ENST00000444237 SLC35D3Q5M8T2 416 aa4.72□□□□□ -1.65
SCN11A-202ENST00000444237 YOD1Q5VVQ6 348 aaPredicted RBP4.72□□□□□ -1.65
SCN11A-202ENST00000444237 OR4A47Q6IF82 309 aa4.72□□□□□ -1.65
SCN11A-202ENST00000444237 TPRG1Q6ZUI0 275 aa4.72□□□□□ -1.65
SCN11A-202ENST00000444237 MEX3DQ86XN8 651 aaKnown RBP4.72□□□□□ -1.65
SCN11A-202ENST00000444237 LGI3Q8N145 548 aa4.72□□□□□ -1.65
SCN11A-202ENST00000444237 ZNF511Q8NB15 262 aa4.72□□□□□ -1.65
SCN11A-202ENST00000444237 OR10AD1Q8NGE0 317 aa4.72□□□□□ -1.65
SCN11A-202ENST00000444237 PPTC7Q8NI37 304 aa4.72□□□□□ -1.65
SCN11A-202ENST00000444237 MR1Q95460 341 aa4.72□□□□□ -1.65
SCN11A-202ENST00000444237 ISG20Q96AZ6 181 aaKnown RBP4.72□□□□□ -1.65
SCN11A-202ENST00000444237 ACY3Q96HD9 319 aa4.72□□□□□ -1.65
SCN11A-202ENST00000444237 OR1F2PQ96R84 312 aa4.72□□□□□ -1.65
SCN11A-202ENST00000444237 PLEKHA3Q9HB20 300 aa4.72□□□□□ -1.65
SCN11A-202ENST00000444237 CA10Q9NS85 328 aa4.72□□□□□ -1.65
SCN11A-202ENST00000444237 CD84Q9UIB8 345 aa4.72□□□□□ -1.65
SCN11A-202ENST00000444237 ZDHHC8Q9ULC8 765 aa4.72□□□□□ -1.65
SCN11A-202ENST00000444237 MOKQ9UQ07 419 aa4.72□□□□□ -1.65
SCN11A-202ENST00000444237 A0A1W2PPV4 95 aa4.71□□□□□ -1.65
SCN11A-202ENST00000444237 DUSP11O75319 330 aaKnown RBP4.71□□□□□ -1.65
SCN11A-202ENST00000444237 IGHA2P01877 340 aa4.71□□□□□ -1.65
SCN11A-202ENST00000444237 GYPBP06028 91 aa4.71□□□□□ -1.65
SCN11A-202ENST00000444237 SDHBP21912 280 aa4.71□□□□□ -1.65
SCN11A-202ENST00000444237 CORO1AP31146 461 aaKnown RBP4.71□□□□□ -1.65
SCN11A-202ENST00000444237 CD200P41217 278 aa4.71□□□□□ -1.65
SCN11A-202ENST00000444237 CDC34P49427 236 aaPredicted RBP4.71□□□□□ -1.65
SCN11A-202ENST00000444237 THBS3P49746 956 aa4.71□□□□□ -1.65
SCN11A-202ENST00000444237 KLF3P57682 345 aaPredicted RBP4.71□□□□□ -1.65
SCN11A-202ENST00000444237 FXYD4P59646 89 aa4.71□□□□□ -1.65
SCN11A-202ENST00000444237 ZNF90Q03938 601 aa4.71□□□□□ -1.65
SCN11A-202ENST00000444237 ZP2Q05996 745 aa4.71□□□□□ -1.65
SCN11A-202ENST00000444237 CDK5R1Q15078 307 aa4.71□□□□□ -1.65
SCN11A-202ENST00000444237 RAB35Q15286 201 aa4.71□□□□□ -1.65
SCN11A-202ENST00000444237 PRRT3Q5FWE3 981 aa4.71□□□□□ -1.65
SCN11A-202ENST00000444237 HMGN2P46Q86SG4 172 aa4.71□□□□□ -1.65
SCN11A-202ENST00000444237 TMEM99Q8N816 258 aa4.71□□□□□ -1.65
SCN11A-202ENST00000444237 MYADMQ96S97 322 aa4.71□□□□□ -1.65
SCN11A-202ENST00000444237 C1orf198Q9H425 327 aa4.71□□□□□ -1.65
SCN11A-202ENST00000444237 TUBA4BQ9H853 241 aa4.71□□□□□ -1.65
SCN11A-202ENST00000444237 MED20Q9H944 212 aa4.71□□□□□ -1.65
SCN11A-202ENST00000444237 SERTAD4Q9NUC0 356 aa4.71□□□□□ -1.65
SCN11A-202ENST00000444237 SIDT1Q9NXL6 827 aaKnown RBP4.71□□□□□ -1.65
SCN11A-202ENST00000444237 OR5V1Q9UGF6 321 aa4.71□□□□□ -1.65
SCN11A-202ENST00000444237 MAP1LC3B2A6NCE7 125 aa4.71□□□□□ -1.66
SCN11A-202ENST00000444237 ZNF749O43361 778 aa4.71□□□□□ -1.66
SCN11A-202ENST00000444237 KLK8O60259 260 aa4.71□□□□□ -1.66
SCN11A-202ENST00000444237 SEMA7AO75326 666 aa4.71□□□□□ -1.66
SCN11A-202ENST00000444237 CLDN7O95471 211 aa4.71□□□□□ -1.66
SCN11A-202ENST00000444237 OR5H8P0DN80 308 aa4.71□□□□□ -1.66
SCN11A-202ENST00000444237 ACRP10323 421 aa4.71□□□□□ -1.66
SCN11A-202ENST00000444237 OMGP23515 440 aa4.71□□□□□ -1.66
SCN11A-202ENST00000444237 FOXK2Q01167 660 aa4.71□□□□□ -1.66
SCN11A-202ENST00000444237 SDHAF4Q5VUM1 108 aa4.71□□□□□ -1.66
SCN11A-202ENST00000444237 ZNF787Q6DD87 383 aa4.71□□□□□ -1.66
SCN11A-202ENST00000444237 NXPE4Q6UWF7 544 aa4.71□□□□□ -1.66
SCN11A-202ENST00000444237 ZNF440Q8IYI8 595 aa4.71□□□□□ -1.66
SCN11A-202ENST00000444237 PRSS35Q8N3Z0 413 aa4.71□□□□□ -1.66
SCN11A-202ENST00000444237 CSNK1A1LQ8N752 337 aa4.71□□□□□ -1.66
SCN11A-202ENST00000444237 ZSCAN4Q8NAM6 433 aaPredicted RBP4.71□□□□□ -1.66
SCN11A-202ENST00000444237 BEND2Q8NDZ0 799 aa4.71□□□□□ -1.66
SCN11A-202ENST00000444237 NUDT10Q8NFP7 164 aa4.71□□□□□ -1.66
SCN11A-202ENST00000444237 OR51A4Q8NGJ6 313 aa4.71□□□□□ -1.66
SCN11A-202ENST00000444237 OR1P1Q8NH06 330 aa4.71□□□□□ -1.66
SCN11A-202ENST00000444237 TCTN2Q96GX1 697 aa4.71□□□□□ -1.66
SCN11A-202ENST00000444237 RBM18Q96H35 190 aaKnown RBP4.71□□□□□ -1.66
SCN11A-202ENST00000444237 SMOQ99835 787 aa4.71□□□□□ -1.66
SCN11A-202ENST00000444237 ALKBH7Q9BT30 221 aaPredicted RBP4.71□□□□□ -1.66
SCN11A-202ENST00000444237 NMES1Q9C002 83 aa4.71□□□□□ -1.66
SCN11A-202ENST00000444237 MAP1LC3BQ9GZQ8 125 aa4.71□□□□□ -1.66
SCN11A-202ENST00000444237 ZNF286AQ9HBT8 521 aa4.71□□□□□ -1.66
SCN11A-202ENST00000444237 Q9N2J8 555 aa4.71□□□□□ -1.66
SCN11A-202ENST00000444237 SLC17A5Q9NRA2 495 aa4.71□□□□□ -1.66
SCN11A-202ENST00000444237 GPR55Q9Y2T6 319 aaPredicted RBP4.71□□□□□ -1.66
SCN11A-202ENST00000444237 RBFOX3A6NFN3 312 aa4.71□□□□□ -1.66
SCN11A-202ENST00000444237 C17orf112F2Z3M2 114 aa4.71□□□□□ -1.66
SCN11A-202ENST00000444237 TRAPPC6AO75865 159 aa4.71□□□□□ -1.66
SCN11A-202ENST00000444237 TTRP02766 147 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms