RNA–Protein interactions for RNA: ENST00000443727.1

LRCH3-208, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-208ENST00000443727 C4orf45Q96LM5 186 aa17.15■□□□□ 0.34
LRCH3-208ENST00000443727 ERMAPQ96PL5 475 aaPredicted RBP17.15■□□□□ 0.34
LRCH3-208ENST00000443727 FUZQ9BT04 418 aa17.15■□□□□ 0.34
LRCH3-208ENST00000443727 COA3Q9Y2R0 106 aaPredicted RBP17.15■□□□□ 0.34
LRCH3-208ENST00000443727 POLR1DQ9Y2S0 133 aa17.15■□□□□ 0.34
LRCH3-208ENST00000443727 SGCEO43556 437 aa17.14■□□□□ 0.33
LRCH3-208ENST00000443727 PPP1R3DO95685 299 aa17.14■□□□□ 0.33
LRCH3-208ENST00000443727 ABHD16AO95870 558 aa17.14■□□□□ 0.33
LRCH3-208ENST00000443727 SRD5A1P18405 259 aa17.14■□□□□ 0.33
LRCH3-208ENST00000443727 RRM2P31350 389 aa17.14■□□□□ 0.33
LRCH3-208ENST00000443727 SLC6A6P31641 620 aa17.14■□□□□ 0.33
LRCH3-208ENST00000443727 MPV17P39210 176 aa17.14■□□□□ 0.33
LRCH3-208ENST00000443727 TEKQ02763 1124 aa17.14■□□□□ 0.33
LRCH3-208ENST00000443727 DNM1P34Q6PK57 102 aa17.14■□□□□ 0.33
LRCH3-208ENST00000443727 IL17RELQ6ZVW7 336 aa17.14■□□□□ 0.33
LRCH3-208ENST00000443727 ZER1Q7Z7L7 766 aa17.14■□□□□ 0.33
LRCH3-208ENST00000443727 ZDHHC21Q8IVQ6 265 aa17.14■□□□□ 0.33
LRCH3-208ENST00000443727 KLF14Q8TD94 323 aaPredicted RBP17.14■□□□□ 0.33
LRCH3-208ENST00000443727 GTF3AQ92664 365 aaKnown RBP17.14■□□□□ 0.33
LRCH3-208ENST00000443727 CCT8L2Q96SF2 557 aa17.14■□□□□ 0.33
LRCH3-208ENST00000443727 GPA33Q99795 319 aa17.14■□□□□ 0.33
LRCH3-208ENST00000443727 IL1RAPQ9NPH3 570 aa17.14■□□□□ 0.33
LRCH3-208ENST00000443727 NKIRAS2Q9NYR9 191 aa17.14■□□□□ 0.33
LRCH3-208ENST00000443727 PLEK2Q9NYT0 353 aa17.14■□□□□ 0.33
LRCH3-208ENST00000443727 VSX1Q9NZR4 365 aaPredicted RBP17.14■□□□□ 0.33
LRCH3-208ENST00000443727 MALRD1Q5VYJ5 2156 aa17.13■□□□□ 0.33
LRCH3-208ENST00000443727 B2RBV5 119 aa17.13■□□□□ 0.33
LRCH3-208ENST00000443727 SPRY3O43610 288 aa17.13■□□□□ 0.33
LRCH3-208ENST00000443727 NGFP01138 241 aa17.13■□□□□ 0.33
LRCH3-208ENST00000443727 COX5BP10606 129 aa17.13■□□□□ 0.33
LRCH3-208ENST00000443727 FXYD6P3P58550 94 aa17.13■□□□□ 0.33
LRCH3-208ENST00000443727 AQP6Q13520 282 aa17.13■□□□□ 0.33
LRCH3-208ENST00000443727 RFX4Q33E94 735 aa17.13■□□□□ 0.33
LRCH3-208ENST00000443727 MBNL2Q5VZF2 373 aaKnown RBP17.13■□□□□ 0.33
LRCH3-208ENST00000443727 OTPQ5XKR4 325 aa17.13■□□□□ 0.33
LRCH3-208ENST00000443727 CYP2R1Q6VVX0 501 aa17.13■□□□□ 0.33
LRCH3-208ENST00000443727 PTCHD4Q6ZW05 846 aa17.13■□□□□ 0.33
LRCH3-208ENST00000443727 ZSCAN2Q7Z7L9 614 aaPredicted RBP17.13■□□□□ 0.33
LRCH3-208ENST00000443727 JAZF1Q86VZ6 243 aa17.13■□□□□ 0.33
LRCH3-208ENST00000443727 IFT27Q9BW83 186 aa17.13■□□□□ 0.33
LRCH3-208ENST00000443727 NUAK2Q9H093 628 aa17.13■□□□□ 0.33
LRCH3-208ENST00000443727 OR52D1Q9H346 318 aa17.13■□□□□ 0.33
LRCH3-208ENST00000443727 SAP30LQ9HAJ7 183 aa17.13■□□□□ 0.33
LRCH3-208ENST00000443727 CYSLTR2Q9NS75 346 aa17.13■□□□□ 0.33
LRCH3-208ENST00000443727 ASH2LQ9UBL3 628 aa17.13■□□□□ 0.33
LRCH3-208ENST00000443727 COL6A5A8TX70 2615 aa17.12■□□□□ 0.33
LRCH3-208ENST00000443727 IGHV1-69-2A0A0G2JMI3 117 aa17.12■□□□□ 0.33
LRCH3-208ENST00000443727 H3BSA7 217 aa17.12■□□□□ 0.33
LRCH3-208ENST00000443727 IMPA2O14732 288 aa17.12■□□□□ 0.33
LRCH3-208ENST00000443727 MPZL1O95297 269 aa17.12■□□□□ 0.33
LRCH3-208ENST00000443727 TXNDC12O95881 172 aa17.12■□□□□ 0.33
LRCH3-208ENST00000443727 GSTM3P21266 225 aa17.12■□□□□ 0.33
LRCH3-208ENST00000443727 FPR3P25089 353 aa17.12■□□□□ 0.33
LRCH3-208ENST00000443727 NOS3P29474 1203 aa17.12■□□□□ 0.33
LRCH3-208ENST00000443727 CRABP1P29762 137 aa17.12■□□□□ 0.33
LRCH3-208ENST00000443727 CDKN2AP42771 156 aaKnown RBP17.12■□□□□ 0.33
LRCH3-208ENST00000443727 CDH15P55291 814 aa17.12■□□□□ 0.33
LRCH3-208ENST00000443727 LSM6P62312 80 aaKnown RBP17.12■□□□□ 0.33
LRCH3-208ENST00000443727 CR1LQ2VPA4 569 aa17.12■□□□□ 0.33
LRCH3-208ENST00000443727 USP51Q70EK9 711 aa17.12■□□□□ 0.33
LRCH3-208ENST00000443727 VASH1Q7L8A9 365 aaPredicted RBP17.12■□□□□ 0.33
LRCH3-208ENST00000443727 CLDND2Q8NHS1 167 aa17.12■□□□□ 0.33
LRCH3-208ENST00000443727 NSL1Q96IY1 281 aa17.12■□□□□ 0.33
LRCH3-208ENST00000443727 GRIP1Q9Y3R0 1128 aa17.12■□□□□ 0.33
LRCH3-208ENST00000443727 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP17.12■□□□□ 0.33
LRCH3-208ENST00000443727 RNF212BA8MTL3 300 aa17.11■□□□□ 0.33
LRCH3-208ENST00000443727 B4DSR2 109 aa17.11■□□□□ 0.33
LRCH3-208ENST00000443727 TIMM8AO60220 97 aaPredicted RBP17.11■□□□□ 0.33
LRCH3-208ENST00000443727 ICMTO60725 284 aa17.11■□□□□ 0.33
LRCH3-208ENST00000443727 RP2O75695 350 aa17.11■□□□□ 0.33
LRCH3-208ENST00000443727 RENP00797 406 aa17.11■□□□□ 0.33
LRCH3-208ENST00000443727 LIPAP38571 399 aa17.11■□□□□ 0.33
LRCH3-208ENST00000443727 CRYBB2P43320 205 aa17.11■□□□□ 0.33
LRCH3-208ENST00000443727 HFEQ30201 348 aa17.11■□□□□ 0.33
LRCH3-208ENST00000443727 ZMAT1Q5H9K5 638 aa17.11■□□□□ 0.33
LRCH3-208ENST00000443727 FAM209AQ5JX71 171 aa17.11■□□□□ 0.33
LRCH3-208ENST00000443727 C1orf94Q6P1W5 598 aa17.11■□□□□ 0.33
LRCH3-208ENST00000443727 LEG1Q6P5S2 330 aa17.11■□□□□ 0.33
LRCH3-208ENST00000443727 CXXC5Q7LFL8 322 aaKnown RBP17.11■□□□□ 0.33
LRCH3-208ENST00000443727 FITM2Q8N6M3 262 aa17.11■□□□□ 0.33
LRCH3-208ENST00000443727 NPEPL1Q8NDH3 523 aa17.11■□□□□ 0.33
LRCH3-208ENST00000443727 GNPDA2Q8TDQ7 276 aa17.11■□□□□ 0.33
LRCH3-208ENST00000443727 SAMD8Q96LT4 415 aa17.11■□□□□ 0.33
LRCH3-208ENST00000443727 EGLN1Q9GZT9 426 aa17.11■□□□□ 0.33
LRCH3-208ENST00000443727 TREM2Q9NZC2 230 aa17.11■□□□□ 0.33
LRCH3-208ENST00000443727 ACTR3BQ9P1U1 418 aa17.11■□□□□ 0.33
LRCH3-208ENST00000443727 KRT36O76013 467 aa17.1■□□□□ 0.33
LRCH3-208ENST00000443727 IGHV1-46P01743 117 aa17.1■□□□□ 0.33
LRCH3-208ENST00000443727 TFP02787 698 aa17.1■□□□□ 0.33
LRCH3-208ENST00000443727 MMP15P51511 669 aa17.1■□□□□ 0.33
LRCH3-208ENST00000443727 MVKQ03426 396 aa17.1■□□□□ 0.33
LRCH3-208ENST00000443727 AVPI1Q5T686 147 aa17.1■□□□□ 0.33
LRCH3-208ENST00000443727 CCDC197Q8NCU1 140 aa17.1■□□□□ 0.33
LRCH3-208ENST00000443727 OR4K13Q8NH42 304 aa17.1■□□□□ 0.33
LRCH3-208ENST00000443727 OR1F12Q8NHA8 337 aa17.1■□□□□ 0.33
LRCH3-208ENST00000443727 ELMOD3Q96FG2 381 aa17.1■□□□□ 0.33
LRCH3-208ENST00000443727 TSSK2Q96PF2 358 aa17.1■□□□□ 0.33
LRCH3-208ENST00000443727 NMNAT3Q96T66 252 aa17.1■□□□□ 0.33
LRCH3-208ENST00000443727 SRA1Q9HD15 236 aaKnown RBP17.1■□□□□ 0.33
LRCH3-208ENST00000443727 TBCCD1Q9NVR7 557 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms