RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 OR10H5Q8NGA6 315 aa12.97□□□□□ -0.33
CSNK1E-210ENST00000442216 AKR7LQ8NHP1 331 aa12.97□□□□□ -0.33
CSNK1E-210ENST00000442216 MRPL24Q96A35 216 aaKnown RBP12.97□□□□□ -0.33
CSNK1E-210ENST00000442216 PERPQ96FX8 193 aa12.97□□□□□ -0.33
CSNK1E-210ENST00000442216 FOXN4Q96NZ1 517 aa12.97□□□□□ -0.33
CSNK1E-210ENST00000442216 CACNG6Q9BXT2 260 aa12.97□□□□□ -0.33
CSNK1E-210ENST00000442216 FN3KQ9H479 309 aa12.97□□□□□ -0.33
CSNK1E-210ENST00000442216 PLK3Q9H4B4 646 aa12.97□□□□□ -0.33
CSNK1E-210ENST00000442216 BARX1Q9HBU1 254 aaPredicted RBP12.97□□□□□ -0.33
CSNK1E-210ENST00000442216 ASH2LQ9UBL3 628 aa12.97□□□□□ -0.33
CSNK1E-210ENST00000442216 EIF3KQ9UBQ5 218 aaKnown RBP12.97□□□□□ -0.33
CSNK1E-210ENST00000442216 OTOGQ6ZRI0 2925 aa12.96□□□□□ -0.33
CSNK1E-210ENST00000442216 LOC100509620A0A075B734 347 aa12.96□□□□□ -0.33
CSNK1E-210ENST00000442216 DOK2O60496 412 aa12.96□□□□□ -0.33
CSNK1E-210ENST00000442216 TFP02787 698 aa12.96□□□□□ -0.33
CSNK1E-210ENST00000442216 CCL2P13500 99 aa12.96□□□□□ -0.33
CSNK1E-210ENST00000442216 PAICSP22234 425 aaKnown RBP12.96□□□□□ -0.33
CSNK1E-210ENST00000442216 POU1F1P28069 291 aa12.96□□□□□ -0.33
CSNK1E-210ENST00000442216 CDKN1AP38936 164 aa12.96□□□□□ -0.33
CSNK1E-210ENST00000442216 UCP2P55851 309 aa12.96□□□□□ -0.33
CSNK1E-210ENST00000442216 HIST1H3AP68431 136 aa12.96□□□□□ -0.33
CSNK1E-210ENST00000442216 GABPB1Q06547 395 aaPredicted RBP12.96□□□□□ -0.33
CSNK1E-210ENST00000442216 HIST2H3PS2Q5TEC6 136 aa12.96□□□□□ -0.33
CSNK1E-210ENST00000442216 ACSM5Q6NUN0 579 aa12.96□□□□□ -0.33
CSNK1E-210ENST00000442216 ZNF774Q6NX45 483 aa12.96□□□□□ -0.33
CSNK1E-210ENST00000442216 ARL9Q6T311 187 aa12.96□□□□□ -0.33
CSNK1E-210ENST00000442216 HIST2H3AQ71DI3 136 aa12.96□□□□□ -0.33
CSNK1E-210ENST00000442216 VASH1Q7L8A9 365 aaPredicted RBP12.96□□□□□ -0.33
CSNK1E-210ENST00000442216 TGIF2LYQ8IUE0 185 aa12.96□□□□□ -0.33
CSNK1E-210ENST00000442216 KRTAP1-3Q8IUG1 177 aa12.96□□□□□ -0.33
CSNK1E-210ENST00000442216 PAQR4Q8N4S7 273 aaPredicted RBP12.96□□□□□ -0.33
CSNK1E-210ENST00000442216 PROKR2Q8NFJ6 384 aa12.96□□□□□ -0.33
CSNK1E-210ENST00000442216 IPCEF1Q8WWN9 437 aaPredicted RBP12.96□□□□□ -0.33
CSNK1E-210ENST00000442216 KRT84Q9NSB2 600 aa12.96□□□□□ -0.33
CSNK1E-210ENST00000442216 PLEK2Q9NYT0 353 aa12.96□□□□□ -0.33
CSNK1E-210ENST00000442216 POLR1DQ9Y2S0 133 aa12.96□□□□□ -0.33
CSNK1E-210ENST00000442216 LHFPL6Q9Y693 200 aa12.96□□□□□ -0.33
CSNK1E-210ENST00000442216 MED13LQ71F56 2210 aa12.95□□□□□ -0.34
CSNK1E-210ENST00000442216 C5orf49A4QMS7 147 aa12.95□□□□□ -0.34
CSNK1E-210ENST00000442216 H3BNX3 289 aa12.95□□□□□ -0.34
CSNK1E-210ENST00000442216 SURF4O15260 269 aa12.95□□□□□ -0.34
CSNK1E-210ENST00000442216 SYNGR3O43761 229 aa12.95□□□□□ -0.34
CSNK1E-210ENST00000442216 HLA-DQA2P01906 255 aa12.95□□□□□ -0.34
CSNK1E-210ENST00000442216 ZNF823P16415 610 aa12.95□□□□□ -0.34
CSNK1E-210ENST00000442216 SPI1P17947 270 aa12.95□□□□□ -0.34
CSNK1E-210ENST00000442216 TUBG1P23258 451 aa12.95□□□□□ -0.34
CSNK1E-210ENST00000442216 FMO3P31513 532 aa12.95□□□□□ -0.34
CSNK1E-210ENST00000442216 PPOXP50336 477 aa12.95□□□□□ -0.34
CSNK1E-210ENST00000442216 RAB35Q15286 201 aa12.95□□□□□ -0.34
CSNK1E-210ENST00000442216 MEP1BQ16820 701 aa12.95□□□□□ -0.34
CSNK1E-210ENST00000442216 CCDC92Q53HC0 331 aaPredicted RBP12.95□□□□□ -0.34
CSNK1E-210ENST00000442216 Q5PR19 223 aa12.95□□□□□ -0.34
CSNK1E-210ENST00000442216 RGS7BPQ6MZT1 257 aaPredicted RBP12.95□□□□□ -0.34
CSNK1E-210ENST00000442216 IQCF1Q8N6M8 205 aa12.95□□□□□ -0.34
CSNK1E-210ENST00000442216 DCLRE1CQ96SD1 692 aaKnown RBP12.95□□□□□ -0.34
CSNK1E-210ENST00000442216 DOK1Q99704 481 aa12.95□□□□□ -0.34
CSNK1E-210ENST00000442216 CDADC1Q9BWV3 514 aa12.95□□□□□ -0.34
CSNK1E-210ENST00000442216 HDHD2Q9H0R4 259 aa12.95□□□□□ -0.34
CSNK1E-210ENST00000442216 SEMA6AQ9H2E6 1030 aa12.95□□□□□ -0.34
CSNK1E-210ENST00000442216 ELOVL3Q9HB03 270 aa12.95□□□□□ -0.34
CSNK1E-210ENST00000442216 TUBG2Q9NRH3 451 aa12.95□□□□□ -0.34
CSNK1E-210ENST00000442216 MRPL22Q9NWU5 206 aaKnown RBP12.95□□□□□ -0.34
CSNK1E-210ENST00000442216 CYB5R1Q9UHQ9 305 aa12.95□□□□□ -0.34
CSNK1E-210ENST00000442216 CSMD1Q96PZ7 3565 aa12.95□□□□□ -0.34
CSNK1E-210ENST00000442216 TMEM129A0AVI4 362 aa12.94□□□□□ -0.34
CSNK1E-210ENST00000442216 OR6C6A6NF89 314 aa12.94□□□□□ -0.34
CSNK1E-210ENST00000442216 FAM171A2A8MVW0 826 aa12.94□□□□□ -0.34
CSNK1E-210ENST00000442216 H3BSA7 217 aa12.94□□□□□ -0.34
CSNK1E-210ENST00000442216 J3QW42 95 aa12.94□□□□□ -0.34
CSNK1E-210ENST00000442216 RER1O15258 196 aa12.94□□□□□ -0.34
CSNK1E-210ENST00000442216 GPRIN2O60269 458 aa12.94□□□□□ -0.34
CSNK1E-210ENST00000442216 GPANK1O95872 356 aa12.94□□□□□ -0.34
CSNK1E-210ENST00000442216 ZNF250P15622 560 aa12.94□□□□□ -0.34
CSNK1E-210ENST00000442216 CCNOP22674 350 aa12.94□□□□□ -0.34
CSNK1E-210ENST00000442216 PYCR1P32322 319 aa12.94□□□□□ -0.34
CSNK1E-210ENST00000442216 GGT2P36268 569 aa12.94□□□□□ -0.34
CSNK1E-210ENST00000442216 HTR5AP47898 357 aa12.94□□□□□ -0.34
CSNK1E-210ENST00000442216 PPP2R2BQ00005 443 aa12.94□□□□□ -0.34
CSNK1E-210ENST00000442216 PTGES3Q15185 160 aaKnown RBP12.94□□□□□ -0.34
CSNK1E-210ENST00000442216 TEX30Q5JUR7 227 aa12.94□□□□□ -0.34
CSNK1E-210ENST00000442216 ELFN2Q5R3F8 820 aa12.94□□□□□ -0.34
CSNK1E-210ENST00000442216 SLC18B1Q6NT16 456 aa12.94□□□□□ -0.34
CSNK1E-210ENST00000442216 OR9Q1Q8NGQ5 310 aa12.94□□□□□ -0.34
CSNK1E-210ENST00000442216 OR2AJ1Q8NGZ0 328 aa12.94□□□□□ -0.34
CSNK1E-210ENST00000442216 OR1F12Q8NHA8 337 aa12.94□□□□□ -0.34
CSNK1E-210ENST00000442216 PTP4A1Q93096 173 aa12.94□□□□□ -0.34
CSNK1E-210ENST00000442216 PLEKHA8Q96JA3 519 aa12.94□□□□□ -0.34
CSNK1E-210ENST00000442216 COQ7Q99807 217 aa12.94□□□□□ -0.34
CSNK1E-210ENST00000442216 PKP2Q99959 881 aa12.94□□□□□ -0.34
CSNK1E-210ENST00000442216 RBM4BQ9BQ04 359 aaKnown RBP12.94□□□□□ -0.34
CSNK1E-210ENST00000442216 PRRG3Q9BZD7 231 aa12.94□□□□□ -0.34
CSNK1E-210ENST00000442216 TBCCD1Q9NVR7 557 aa12.94□□□□□ -0.34
CSNK1E-210ENST00000442216 OAZ3Q9UMX2 235 aa12.94□□□□□ -0.34
CSNK1E-210ENST00000442216 IGLV3-9A0A075B6K5 115 aa12.93□□□□□ -0.34
CSNK1E-210ENST00000442216 PRR23D1E9PI22 279 aaPredicted RBP12.93□□□□□ -0.34
CSNK1E-210ENST00000442216 PRODHO43272 600 aa12.93□□□□□ -0.34
CSNK1E-210ENST00000442216 IGHV4-39P01824 125 aa12.93□□□□□ -0.34
CSNK1E-210ENST00000442216 LCKP06239 509 aa12.93□□□□□ -0.34
CSNK1E-210ENST00000442216 FAM157BP0CG42 384 aa12.93□□□□□ -0.34
CSNK1E-210ENST00000442216 PRR23D2P0DMB1 279 aaPredicted RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms