RNA–Protein interactions for RNA: ENST00000441602.5

VPS50-205, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-205ENST00000441602 AK6Q9Y3D8 172 aaKnown RBP5.35□□□□□ -1.55
VPS50-205ENST00000441602 hCG_2014768A0A024R1R8 64 aa5.35□□□□□ -1.55
VPS50-205ENST00000441602 TRBV5-7A0A0A0MS05 114 aa5.35□□□□□ -1.55
VPS50-205ENST00000441602 TRGV5A0A0B4J1U4 118 aa5.35□□□□□ -1.55
VPS50-205ENST00000441602 CENPXA8MT69 81 aa5.35□□□□□ -1.55
VPS50-205ENST00000441602 AIPO00170 330 aa5.35□□□□□ -1.55
VPS50-205ENST00000441602 TFECO14948 347 aaPredicted RBP5.35□□□□□ -1.55
VPS50-205ENST00000441602 MRPL33O75394 65 aaKnown RBP5.35□□□□□ -1.55
VPS50-205ENST00000441602 AZGP1P25311 298 aaKnown RBP5.35□□□□□ -1.55
VPS50-205ENST00000441602 GNALP38405 381 aa5.35□□□□□ -1.55
VPS50-205ENST00000441602 RPS27P42677 84 aaKnown RBP5.35□□□□□ -1.55
VPS50-205ENST00000441602 KIR3DL2P43630 455 aa5.35□□□□□ -1.55
VPS50-205ENST00000441602 MMP16P51512 607 aa5.35□□□□□ -1.55
VPS50-205ENST00000441602 CAV3P56539 151 aa5.35□□□□□ -1.55
VPS50-205ENST00000441602 NANOS3P60323 173 aaKnown RBP5.35□□□□□ -1.55
VPS50-205ENST00000441602 TGIF1Q15583 401 aa5.35□□□□□ -1.55
VPS50-205ENST00000441602 RAB11BQ15907 218 aa5.35□□□□□ -1.55
VPS50-205ENST00000441602 CEP78Q5JTW2 689 aa5.35□□□□□ -1.55
VPS50-205ENST00000441602 UBE2NLQ5JXB2 153 aa5.35□□□□□ -1.55
VPS50-205ENST00000441602 RIPPLY2Q5TAB7 128 aa5.35□□□□□ -1.55
VPS50-205ENST00000441602 NHLRC1Q6VVB1 395 aa5.35□□□□□ -1.55
VPS50-205ENST00000441602 LYSMD2Q8IV50 215 aa5.35□□□□□ -1.55
VPS50-205ENST00000441602 ZADH2Q8N4Q0 377 aa5.35□□□□□ -1.55
VPS50-205ENST00000441602 ZFP62Q8NB50 900 aaPredicted RBP5.35□□□□□ -1.55
VPS50-205ENST00000441602 RAB40AQ8WXH6 277 aa5.35□□□□□ -1.55
VPS50-205ENST00000441602 UCN2Q96RP3 112 aa5.35□□□□□ -1.55
VPS50-205ENST00000441602 SMAD5Q99717 465 aaKnown RBP5.35□□□□□ -1.55
VPS50-205ENST00000441602 SRXN1Q9BYN0 137 aa5.35□□□□□ -1.55
VPS50-205ENST00000441602 SRRQ9GZT4 340 aa5.35□□□□□ -1.55
VPS50-205ENST00000441602 SLC22A4Q9H015 551 aa5.35□□□□□ -1.55
VPS50-205ENST00000441602 CYB5R1Q9UHQ9 305 aa5.35□□□□□ -1.55
VPS50-205ENST00000441602 ING1Q9UK53 422 aaPredicted RBP5.35□□□□□ -1.55
VPS50-205ENST00000441602 SPATA2Q9UM82 520 aa5.35□□□□□ -1.55
VPS50-205ENST00000441602 NOSIPQ9Y314 301 aaKnown RBP5.35□□□□□ -1.55
VPS50-205ENST00000441602 EMC9Q9Y3B6 208 aa5.35□□□□□ -1.55
VPS50-205ENST00000441602 FLVCR1Q9Y5Y0 555 aa5.35□□□□□ -1.55
VPS50-205ENST00000441602 KNTC1P50748 2209 aa5.35□□□□□ -1.55
VPS50-205ENST00000441602 IGHV3-15A0A0B4J1V0 119 aa5.35□□□□□ -1.55
VPS50-205ENST00000441602 A0A1W2PPK0 400 aa5.35□□□□□ -1.55
VPS50-205ENST00000441602 TPPPO94811 219 aa5.35□□□□□ -1.55
VPS50-205ENST00000441602 RFPL3SP0C7P2 107 aa5.35□□□□□ -1.55
VPS50-205ENST00000441602 SLC2A2P11168 524 aaPredicted RBP5.35□□□□□ -1.55
VPS50-205ENST00000441602 EPXP11678 715 aa5.35□□□□□ -1.55
VPS50-205ENST00000441602 EIF2S3P41091 472 aaKnown RBP5.35□□□□□ -1.55
VPS50-205ENST00000441602 STARP49675 285 aa5.35□□□□□ -1.55
VPS50-205ENST00000441602 GFRA1P56159 465 aa5.35□□□□□ -1.55
VPS50-205ENST00000441602 CLDN20P56880 219 aa5.35□□□□□ -1.55
VPS50-205ENST00000441602 MRPS10P82664 201 aaKnown RBP5.35□□□□□ -1.55
VPS50-205ENST00000441602 FAM189A2Q15884 450 aa5.35□□□□□ -1.55
VPS50-205ENST00000441602 HIST3H3Q16695 136 aa5.35□□□□□ -1.55
VPS50-205ENST00000441602 DEFB109BQ30KR1 87 aa5.35□□□□□ -1.55
VPS50-205ENST00000441602 FOXL2NBQ6ZUU3 175 aa5.35□□□□□ -1.55
VPS50-205ENST00000441602 P4HA3Q7Z4N8 544 aa5.35□□□□□ -1.55
VPS50-205ENST00000441602 GGNQ86UU5 652 aa5.35□□□□□ -1.55
VPS50-205ENST00000441602 TMEM123Q8N131 208 aa5.35□□□□□ -1.55
VPS50-205ENST00000441602 NKAIN3Q8N8D7 197 aa5.35□□□□□ -1.55
VPS50-205ENST00000441602 ST7LQ8TDW4 575 aa5.35□□□□□ -1.55
VPS50-205ENST00000441602 TMEM106AQ96A25 262 aa5.35□□□□□ -1.55
VPS50-205ENST00000441602 SCMH1Q96GD3 660 aa5.35□□□□□ -1.55
VPS50-205ENST00000441602 PGAM5Q96HS1 289 aa5.35□□□□□ -1.55
VPS50-205ENST00000441602 MAP6Q96JE9 813 aa5.35□□□□□ -1.55
VPS50-205ENST00000441602 ADGRG7Q96K78 797 aa5.35□□□□□ -1.55
VPS50-205ENST00000441602 DCLRE1CQ96SD1 692 aaKnown RBP5.35□□□□□ -1.55
VPS50-205ENST00000441602 COL25A1Q9BXS0 654 aaPredicted RBP5.35□□□□□ -1.55
VPS50-205ENST00000441602 SLC25A18Q9H1K4 315 aa5.35□□□□□ -1.55
VPS50-205ENST00000441602 SLC6A15Q9H2J7 730 aa5.35□□□□□ -1.55
VPS50-205ENST00000441602 MIXL1Q9H2W2 232 aa5.35□□□□□ -1.55
VPS50-205ENST00000441602 RNF122Q9H9V4 155 aa5.35□□□□□ -1.55
VPS50-205ENST00000441602 NUFIP1Q9UHK0 495 aaKnown RBP5.35□□□□□ -1.55
VPS50-205ENST00000441602 ZNF318Q5VUA4 2279 aa5.34□□□□□ -1.55
VPS50-205ENST00000441602 C5orf42Q9H799 3197 aa5.34□□□□□ -1.55
VPS50-205ENST00000441602 LOC107986453A0A1B0GWG9 222 aa5.34□□□□□ -1.55
VPS50-205ENST00000441602 PINLYPA6NC86 204 aa5.34□□□□□ -1.55
VPS50-205ENST00000441602 NKX2-8O15522 239 aa5.34□□□□□ -1.55
VPS50-205ENST00000441602 SYT7O43581 403 aa5.34□□□□□ -1.55
VPS50-205ENST00000441602 GLSO94925 669 aaPredicted RBP5.34□□□□□ -1.55
VPS50-205ENST00000441602 MPZL1O95297 269 aa5.34□□□□□ -1.55
VPS50-205ENST00000441602 ISG15P05161 165 aa5.34□□□□□ -1.55
VPS50-205ENST00000441602 CST2P09228 141 aa5.34□□□□□ -1.55
VPS50-205ENST00000441602 FSTP19883 344 aa5.34□□□□□ -1.55
VPS50-205ENST00000441602 MAGEA5P43359 124 aa5.34□□□□□ -1.55
VPS50-205ENST00000441602 PITPNBP48739 271 aa5.34□□□□□ -1.55
VPS50-205ENST00000441602 TPTEP56180 551 aa5.34□□□□□ -1.55
VPS50-205ENST00000441602 SRYQ05066 204 aa5.34□□□□□ -1.55
VPS50-205ENST00000441602 C19orf57Q0VDD7 668 aa5.34□□□□□ -1.55
VPS50-205ENST00000441602 DBPQ10586 325 aaPredicted RBP5.34□□□□□ -1.55
VPS50-205ENST00000441602 RIN1Q13671 783 aa5.34□□□□□ -1.55
VPS50-205ENST00000441602 OXA1LQ15070 435 aa5.34□□□□□ -1.55
VPS50-205ENST00000441602 FAM27D1Q5T7N8 215 aa5.34□□□□□ -1.55
VPS50-205ENST00000441602 STAC2Q6ZMT1 411 aa5.34□□□□□ -1.55
VPS50-205ENST00000441602 DPPA2Q7Z7J5 298 aa5.34□□□□□ -1.55
VPS50-205ENST00000441602 LSRQ86X29 649 aaPredicted RBP5.34□□□□□ -1.55
VPS50-205ENST00000441602 ELMOD2Q8IZ81 293 aa5.34□□□□□ -1.55
VPS50-205ENST00000441602 ENKURQ8TC29 256 aa5.34□□□□□ -1.55
VPS50-205ENST00000441602 ROBO4Q8WZ75 1007 aa5.34□□□□□ -1.55
VPS50-205ENST00000441602 S100A16Q96FQ6 103 aaKnown RBP5.34□□□□□ -1.55
VPS50-205ENST00000441602 ZNF385AQ96PM9 386 aaKnown RBP5.34□□□□□ -1.55
VPS50-205ENST00000441602 AMELYQ99218 206 aa5.34□□□□□ -1.55
VPS50-205ENST00000441602 KCNJ15Q99712 375 aa5.34□□□□□ -1.55
VPS50-205ENST00000441602 LINC00470Q9BZP3 86 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms