RNA–Protein interactions for RNA: ENST00000439160.6

TCOF1-205, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,644 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-205ENST00000439160 ZADH2Q8N4Q0 377 aa11.13□□□□□ -0.63
TCOF1-205ENST00000439160 OR2G2Q8NGZ5 317 aa11.13□□□□□ -0.63
TCOF1-205ENST00000439160 PSMF1Q92530 271 aa11.13□□□□□ -0.63
TCOF1-205ENST00000439160 SLC35B4Q969S0 331 aa11.13□□□□□ -0.63
TCOF1-205ENST00000439160 VSTM2LQ96N03 204 aa11.13□□□□□ -0.63
TCOF1-205ENST00000439160 PSD2Q9BQI7 771 aa11.13□□□□□ -0.63
TCOF1-205ENST00000439160 ABHD6Q9BV23 337 aa11.13□□□□□ -0.63
TCOF1-205ENST00000439160 KLF13Q9Y2Y9 288 aaPredicted RBP11.13□□□□□ -0.63
TCOF1-205ENST00000439160 ANKUB1A6NFN9 424 aa11.12□□□□□ -0.63
TCOF1-205ENST00000439160 ALG1L2C9J202 215 aa11.12□□□□□ -0.63
TCOF1-205ENST00000439160 ITGB2P05107 769 aa11.12□□□□□ -0.63
TCOF1-205ENST00000439160 DBPQ10586 325 aaPredicted RBP11.12□□□□□ -0.63
TCOF1-205ENST00000439160 PMPCAQ10713 525 aa11.12□□□□□ -0.63
TCOF1-205ENST00000439160 MYBPHQ13203 477 aa11.12□□□□□ -0.63
TCOF1-205ENST00000439160 IKZF1Q13422 519 aa11.12□□□□□ -0.63
TCOF1-205ENST00000439160 CD226Q15762 336 aa11.12□□□□□ -0.63
TCOF1-205ENST00000439160 LINC00299Q6ZSB3 139 aa11.12□□□□□ -0.63
TCOF1-205ENST00000439160 PGAP1Q75T13 922 aa11.12□□□□□ -0.63
TCOF1-205ENST00000439160 GDPD3Q7L5L3 318 aa11.12□□□□□ -0.63
TCOF1-205ENST00000439160 ADGRE4PQ86SQ3 457 aa11.12□□□□□ -0.63
TCOF1-205ENST00000439160 NKAIN3Q8N8D7 197 aa11.12□□□□□ -0.63
TCOF1-205ENST00000439160 CCDC71LQ8N9Z2 235 aa11.12□□□□□ -0.63
TCOF1-205ENST00000439160 DCUN1D4Q92564 292 aa11.12□□□□□ -0.63
TCOF1-205ENST00000439160 ISYNA1Q9NPH2 558 aa11.12□□□□□ -0.63
TCOF1-205ENST00000439160 FBXO8Q9NRD0 319 aa11.12□□□□□ -0.63
TCOF1-205ENST00000439160 PLA2G3Q9NZ20 509 aa11.12□□□□□ -0.63
TCOF1-205ENST00000439160 ETV7Q9Y603 341 aa11.12□□□□□ -0.63
TCOF1-205ENST00000439160 RLFQ13129 1914 aa11.12□□□□□ -0.63
TCOF1-205ENST00000439160 OTOFQ9HC10 1997 aa11.12□□□□□ -0.63
TCOF1-205ENST00000439160 A0A1B0GV50 99 aa11.12□□□□□ -0.63
TCOF1-205ENST00000439160 STMND1H3BQB6 276 aa11.12□□□□□ -0.63
TCOF1-205ENST00000439160 SLC33A1O00400 549 aaPredicted RBP11.12□□□□□ -0.63
TCOF1-205ENST00000439160 BET1O15155 118 aa11.12□□□□□ -0.63
TCOF1-205ENST00000439160 APOC3P02656 99 aa11.12□□□□□ -0.63
TCOF1-205ENST00000439160 ACHEP22303 614 aa11.12□□□□□ -0.63
TCOF1-205ENST00000439160 HTR2AP28223 471 aa11.12□□□□□ -0.63
TCOF1-205ENST00000439160 PTPN6P29350 595 aa11.12□□□□□ -0.63
TCOF1-205ENST00000439160 ZFP36L2P47974 494 aaKnown RBP11.12□□□□□ -0.63
TCOF1-205ENST00000439160 GZMMP51124 257 aa11.12□□□□□ -0.63
TCOF1-205ENST00000439160 NOVA1P51513 510 aaKnown RBP11.12□□□□□ -0.63
TCOF1-205ENST00000439160 TAS2R31P59538 309 aa11.12□□□□□ -0.63
TCOF1-205ENST00000439160 PPIAP62937 165 aaKnown RBP11.12□□□□□ -0.63
TCOF1-205ENST00000439160 STEAP1BQ6NZ63 245 aa11.12□□□□□ -0.63
TCOF1-205ENST00000439160 FAM198BQ6UWH4 519 aa11.12□□□□□ -0.63
TCOF1-205ENST00000439160 ZNF695Q8IW36 515 aa11.12□□□□□ -0.63
TCOF1-205ENST00000439160 SPAG16Q8N0X2 631 aa11.12□□□□□ -0.63
TCOF1-205ENST00000439160 ZNF321PQ8N8H1 164 aa11.12□□□□□ -0.63
TCOF1-205ENST00000439160 OR52N5Q8NH56 324 aa11.12□□□□□ -0.63
TCOF1-205ENST00000439160 FYTTD1Q96QD9 318 aaKnown RBP11.12□□□□□ -0.63
TCOF1-205ENST00000439160 OR2M2Q96R28 347 aa11.12□□□□□ -0.63
TCOF1-205ENST00000439160 TMEM43Q9BTV4 400 aa11.12□□□□□ -0.63
TCOF1-205ENST00000439160 EXO1Q9UQ84 846 aaKnown RBP11.12□□□□□ -0.63
TCOF1-205ENST00000439160 RFPL3O75679 317 aa11.12□□□□□ -0.63
TCOF1-205ENST00000439160 LIMS3P0CW19 117 aa11.12□□□□□ -0.63
TCOF1-205ENST00000439160 LIMS4P0CW20 117 aa11.12□□□□□ -0.63
TCOF1-205ENST00000439160 CDAP32320 146 aa11.12□□□□□ -0.63
TCOF1-205ENST00000439160 CYCSP99999 105 aaKnown RBP11.12□□□□□ -0.63
TCOF1-205ENST00000439160 FAPQ12884 760 aa11.12□□□□□ -0.63
TCOF1-205ENST00000439160 SLC17A1Q14916 467 aa11.12□□□□□ -0.63
TCOF1-205ENST00000439160 TCEAL3Q969E4 200 aa11.12□□□□□ -0.63
TCOF1-205ENST00000439160 IP6K3Q96PC2 410 aa11.12□□□□□ -0.63
TCOF1-205ENST00000439160 MOGAT1Q96PD6 335 aa11.12□□□□□ -0.63
TCOF1-205ENST00000439160 PPA2Q9H2U2 334 aa11.12□□□□□ -0.63
TCOF1-205ENST00000439160 GPR84Q9NQS5 396 aa11.12□□□□□ -0.63
TCOF1-205ENST00000439160 A0A1B0GTQ1 180 aa11.12□□□□□ -0.63
TCOF1-205ENST00000439160 OR6C68A6NDL8 312 aa11.12□□□□□ -0.63
TCOF1-205ENST00000439160 ZNF254O75437 659 aa11.12□□□□□ -0.63
TCOF1-205ENST00000439160 SNAPC5O75971 98 aa11.12□□□□□ -0.63
TCOF1-205ENST00000439160 MT-CO3P00414 261 aa11.12□□□□□ -0.63
TCOF1-205ENST00000439160 TRA2AQ13595 282 aaKnown RBP eCLIP11.12□□□□□ -0.631e-7■■■■■ 31.7
TCOF1-205ENST00000439160 INSL4Q14641 139 aa11.12□□□□□ -0.63
TCOF1-205ENST00000439160 WIPI1Q5MNZ9 446 aaPredicted RBP11.12□□□□□ -0.63
TCOF1-205ENST00000439160 OR10K2Q6IF99 312 aa11.12□□□□□ -0.63
TCOF1-205ENST00000439160 PPP1R35Q8TAP8 253 aa11.12□□□□□ -0.63
TCOF1-205ENST00000439160 SCGB1C1Q8TD33 95 aa11.12□□□□□ -0.63
TCOF1-205ENST00000439160 ALKBH3Q96Q83 286 aaPredicted RBP11.12□□□□□ -0.63
TCOF1-205ENST00000439160 SLA2Q9H6Q3 261 aa11.12□□□□□ -0.63
TCOF1-205ENST00000439160 HDGFL3Q9Y3E1 203 aa11.12□□□□□ -0.63
TCOF1-205ENST00000439160 PCDHGA5Q9Y5G8 931 aa11.12□□□□□ -0.63
TCOF1-205ENST00000439160 M0R135 149 aa11.11□□□□□ -0.63
TCOF1-205ENST00000439160 NUPL2O15504 423 aaKnown RBP11.11□□□□□ -0.63
TCOF1-205ENST00000439160 FOXS1O43638 330 aa11.11□□□□□ -0.63
TCOF1-205ENST00000439160 RAF1P04049 648 aa11.11□□□□□ -0.63
TCOF1-205ENST00000439160 CPT2P23786 658 aa11.11□□□□□ -0.63
TCOF1-205ENST00000439160 SUMO3P55854 103 aaPredicted RBP11.11□□□□□ -0.63
TCOF1-205ENST00000439160 DGCR2P98153 550 aa11.11□□□□□ -0.63
TCOF1-205ENST00000439160 BDH1Q02338 343 aa11.11□□□□□ -0.63
TCOF1-205ENST00000439160 FMODQ06828 376 aa11.11□□□□□ -0.63
TCOF1-205ENST00000439160 ZNF616Q08AN1 781 aa11.11□□□□□ -0.63
TCOF1-205ENST00000439160 GPR176Q14439 515 aa11.11□□□□□ -0.63
TCOF1-205ENST00000439160 GPR155Q7Z3F1 870 aa11.11□□□□□ -0.63
TCOF1-205ENST00000439160 KIF18BQ86Y91 864 aa11.11□□□□□ -0.63
TCOF1-205ENST00000439160 CARFQ8N187 725 aa11.11□□□□□ -0.63
TCOF1-205ENST00000439160 ZNF709Q8N972 641 aa11.11□□□□□ -0.63
TCOF1-205ENST00000439160 APH1BQ8WW43 257 aa11.11□□□□□ -0.63
TCOF1-205ENST00000439160 ZNF799Q96GE5 643 aa11.11□□□□□ -0.63
TCOF1-205ENST00000439160 RNF170Q96K19 258 aa11.11□□□□□ -0.63
TCOF1-205ENST00000439160 DERL3Q96Q80 235 aa11.11□□□□□ -0.63
TCOF1-205ENST00000439160 SLC52A3Q9NQ40 469 aa11.11□□□□□ -0.63
TCOF1-205ENST00000439160 IGHV3-64DA0A0J9YX35 117 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms