RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 TAAR3PQ9P1P4 343 aa21.22■□□□□ 0.99
RAPGEF1-206ENST00000438647 MYEF2Q9P2K5 600 aaKnown RBP21.22■□□□□ 0.99
RAPGEF1-206ENST00000438647 POLR1DQ9Y2S0 133 aa21.22■□□□□ 0.99
RAPGEF1-206ENST00000438647 CR1P17927 2039 aa21.21■□□□□ 0.99
RAPGEF1-206ENST00000438647 ICMTO60725 284 aa21.21■□□□□ 0.99
RAPGEF1-206ENST00000438647 CST1P01037 141 aa21.21■□□□□ 0.99
RAPGEF1-206ENST00000438647 IGFBP1P08833 259 aaPredicted RBP21.21■□□□□ 0.99
RAPGEF1-206ENST00000438647 USF1P22415 310 aaPredicted RBP21.21■□□□□ 0.99
RAPGEF1-206ENST00000438647 WNT5AP41221 380 aa21.21■□□□□ 0.99
RAPGEF1-206ENST00000438647 CENPAP49450 140 aa21.21■□□□□ 0.99
RAPGEF1-206ENST00000438647 RASSF2P50749 326 aa21.21■□□□□ 0.99
RAPGEF1-206ENST00000438647 ARHGDIAP52565 204 aa21.21■□□□□ 0.99
RAPGEF1-206ENST00000438647 ERVS71-1P61550 626 aa21.21■□□□□ 0.99
RAPGEF1-206ENST00000438647 GLO1Q04760 184 aa21.21■□□□□ 0.99
RAPGEF1-206ENST00000438647 PPP1R8Q12972 351 aaKnown RBP21.21■□□□□ 0.99
RAPGEF1-206ENST00000438647 KCNMB1Q16558 191 aa21.21■□□□□ 0.99
RAPGEF1-206ENST00000438647 ZNF718Q3SXZ3 478 aa21.21■□□□□ 0.99
RAPGEF1-206ENST00000438647 CLEC12AQ5QGZ9 265 aa21.21■□□□□ 0.99
RAPGEF1-206ENST00000438647 ZNF101Q8IZC7 436 aa21.21■□□□□ 0.99
RAPGEF1-206ENST00000438647 UBASH3BQ8TF42 649 aa21.21■□□□□ 0.99
RAPGEF1-206ENST00000438647 CANT1Q8WVQ1 401 aa21.21■□□□□ 0.99
RAPGEF1-206ENST00000438647 TSSK2Q96PF2 358 aa21.21■□□□□ 0.99
RAPGEF1-206ENST00000438647 DGCR6LQ9BY27 220 aa21.21■□□□□ 0.99
RAPGEF1-206ENST00000438647 YY1AP1Q9H869 796 aa21.21■□□□□ 0.99
RAPGEF1-206ENST00000438647 VNN3Q9NY84 501 aa21.21■□□□□ 0.99
RAPGEF1-206ENST00000438647 PLEK2Q9NYT0 353 aa21.21■□□□□ 0.99
RAPGEF1-206ENST00000438647 ASH2LQ9UBL3 628 aa21.21■□□□□ 0.99
RAPGEF1-206ENST00000438647 B9D1Q9UPM9 204 aa21.21■□□□□ 0.99
RAPGEF1-206ENST00000438647 MT-ND5P03915 603 aa21.2■□□□□ 0.98
RAPGEF1-206ENST00000438647 GCH1P30793 250 aa21.2■□□□□ 0.98
RAPGEF1-206ENST00000438647 NR4A2P43354 598 aa21.2■□□□□ 0.98
RAPGEF1-206ENST00000438647 HTR5AP47898 357 aa21.2■□□□□ 0.98
RAPGEF1-206ENST00000438647 KRTAP1-1Q07627 177 aa21.2■□□□□ 0.98
RAPGEF1-206ENST00000438647 MAD2L1BPQ15013 274 aaPredicted RBP21.2■□□□□ 0.98
RAPGEF1-206ENST00000438647 SPATA24Q86W54 205 aa21.2■□□□□ 0.98
RAPGEF1-206ENST00000438647 ZNF786Q8N393 782 aa21.2■□□□□ 0.98
RAPGEF1-206ENST00000438647 SDR9C7Q8NEX9 313 aa21.2■□□□□ 0.98
RAPGEF1-206ENST00000438647 OR52E2Q8NGJ4 325 aa21.2■□□□□ 0.98
RAPGEF1-206ENST00000438647 C4orf45Q96LM5 186 aa21.2■□□□□ 0.98
RAPGEF1-206ENST00000438647 SRA1Q9HD15 236 aaKnown RBP21.2■□□□□ 0.98
RAPGEF1-206ENST00000438647 RPRD1BQ9NQG5 326 aaKnown RBP21.2■□□□□ 0.98
RAPGEF1-206ENST00000438647 TBC1D23Q9NUY8 699 aa21.2■□□□□ 0.98
RAPGEF1-206ENST00000438647 ABCA1O95477 2261 aa21.2■□□□□ 0.98
RAPGEF1-206ENST00000438647 IGLV1-36A0A0B4J1U3 117 aa21.19■□□□□ 0.98
RAPGEF1-206ENST00000438647 VWC2LB2RUY7 222 aa21.19■□□□□ 0.98
RAPGEF1-206ENST00000438647 H3BSA7 217 aa21.19■□□□□ 0.98
RAPGEF1-206ENST00000438647 DCTN6O00399 190 aa21.19■□□□□ 0.98
RAPGEF1-206ENST00000438647 BHLHE40O14503 412 aa21.19■□□□□ 0.98
RAPGEF1-206ENST00000438647 GNGT2O14610 69 aa21.19■□□□□ 0.98
RAPGEF1-206ENST00000438647 CD5LO43866 347 aa21.19■□□□□ 0.98
RAPGEF1-206ENST00000438647 MPZL1O95297 269 aa21.19■□□□□ 0.98
RAPGEF1-206ENST00000438647 CLPTM1O96005 669 aa21.19■□□□□ 0.98
RAPGEF1-206ENST00000438647 KHDRBS1Q07666 443 aaKnown RBP eCLIP21.19■□□□□ 0.98
RAPGEF1-206ENST00000438647 BNIP1Q12981 228 aa21.19■□□□□ 0.98
RAPGEF1-206ENST00000438647 TMEM249Q2WGJ8 235 aa21.19■□□□□ 0.98
RAPGEF1-206ENST00000438647 SLC35F1Q5T1Q4 408 aa21.19■□□□□ 0.98
RAPGEF1-206ENST00000438647 VASH1Q7L8A9 365 aaPredicted RBP21.19■□□□□ 0.98
RAPGEF1-206ENST00000438647 ZBTB46Q86UZ6 589 aa21.19■□□□□ 0.98
RAPGEF1-206ENST00000438647 OR6V1Q8N148 313 aa21.19■□□□□ 0.98
RAPGEF1-206ENST00000438647 OR10G2Q8NGC3 310 aa21.19■□□□□ 0.98
RAPGEF1-206ENST00000438647 ABHD4Q8TB40 342 aa21.19■□□□□ 0.98
RAPGEF1-206ENST00000438647 ATPIF1Q9UII2 106 aa21.19■□□□□ 0.98
RAPGEF1-206ENST00000438647 BAIAP2Q9UQB8 552 aa21.19■□□□□ 0.98
RAPGEF1-206ENST00000438647 POMPQ9Y244 141 aa21.19■□□□□ 0.98
RAPGEF1-206ENST00000438647 TLX2O43763 284 aaPredicted RBP21.18■□□□□ 0.98
RAPGEF1-206ENST00000438647 ATP5HO75947 161 aa21.18■□□□□ 0.98
RAPGEF1-206ENST00000438647 ABHD16AO95870 558 aa21.18■□□□□ 0.98
RAPGEF1-206ENST00000438647 IGHV3-13P01766 116 aa21.18■□□□□ 0.98
RAPGEF1-206ENST00000438647 GAAP10253 952 aa21.18■□□□□ 0.98
RAPGEF1-206ENST00000438647 NAT2P11245 290 aa21.18■□□□□ 0.98
RAPGEF1-206ENST00000438647 HOXB4P17483 251 aaPredicted RBP21.18■□□□□ 0.98
RAPGEF1-206ENST00000438647 COX10Q12887 443 aa21.18■□□□□ 0.98
RAPGEF1-206ENST00000438647 SLC36A3Q495N2 470 aa21.18■□□□□ 0.98
RAPGEF1-206ENST00000438647 TMEM154Q6P9G4 183 aa21.18■□□□□ 0.98
RAPGEF1-206ENST00000438647 RFPL4BQ6ZWI9 263 aa21.18■□□□□ 0.98
RAPGEF1-206ENST00000438647 GJC3Q8NFK1 279 aa21.18■□□□□ 0.98
RAPGEF1-206ENST00000438647 POM121Q96HA1 1249 aa21.18■□□□□ 0.98
RAPGEF1-206ENST00000438647 PLA2G12AQ9BZM1 189 aa21.18■□□□□ 0.98
RAPGEF1-206ENST00000438647 HINT3Q9NQE9 182 aaKnown RBP21.18■□□□□ 0.98
RAPGEF1-206ENST00000438647 TBCCD1Q9NVR7 557 aa21.18■□□□□ 0.98
RAPGEF1-206ENST00000438647 OR6C68A6NDL8 312 aa21.17■□□□□ 0.98
RAPGEF1-206ENST00000438647 ARRDC5A6NEK1 342 aa21.17■□□□□ 0.98
RAPGEF1-206ENST00000438647 TUBG1P23258 451 aa21.17■□□□□ 0.98
RAPGEF1-206ENST00000438647 GIFP27352 417 aa21.17■□□□□ 0.98
RAPGEF1-206ENST00000438647 PPP1CBP62140 327 aa21.17■□□□□ 0.98
RAPGEF1-206ENST00000438647 GGTLC2Q14390 218 aa21.17■□□□□ 0.98
RAPGEF1-206ENST00000438647 PCGF3Q3KNV8 242 aa21.17■□□□□ 0.98
RAPGEF1-206ENST00000438647 MBNL2Q5VZF2 373 aaKnown RBP21.17■□□□□ 0.98
RAPGEF1-206ENST00000438647 NPEPL1Q8NDH3 523 aa21.17■□□□□ 0.98
RAPGEF1-206ENST00000438647 OR2T33Q8NG76 320 aa21.17■□□□□ 0.98
RAPGEF1-206ENST00000438647 SLC25A40Q8TBP6 338 aa21.17■□□□□ 0.98
RAPGEF1-206ENST00000438647 GIPC3Q8TF64 312 aa21.17■□□□□ 0.98
RAPGEF1-206ENST00000438647 MARS2Q96GW9 593 aaKnown RBP21.17■□□□□ 0.98
RAPGEF1-206ENST00000438647 TSSK6Q9BXA6 273 aa21.17■□□□□ 0.98
RAPGEF1-206ENST00000438647 BPESC1Q9GZL8 116 aa21.17■□□□□ 0.98
RAPGEF1-206ENST00000438647 TUBG2Q9NRH3 451 aa21.17■□□□□ 0.98
RAPGEF1-206ENST00000438647 FN1P02751 2386 aaKnown RBP21.16■□□□□ 0.98
RAPGEF1-206ENST00000438647 C17orf100A8MU93 164 aa21.16■□□□□ 0.98
RAPGEF1-206ENST00000438647 GSC2O15499 205 aa21.16■□□□□ 0.98
RAPGEF1-206ENST00000438647 ALKBH6Q3KRA9 238 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms