RNA–Protein interactions for RNA: ENST00000438629.2

LSM1P1-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 1, humanhuman

BASIC

Gene LSM1P1, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P1-201ENST00000438629 ERFP50548 548 aa2.63□□□□□ -1.99
LSM1P1-201ENST00000438629 NUP107P57740 925 aa2.63□□□□□ -1.99
LSM1P1-201ENST00000438629 AP3S2P59780 193 aa2.63□□□□□ -1.99
LSM1P1-201ENST00000438629 VSNL1P62760 191 aa2.63□□□□□ -1.99
LSM1P1-201ENST00000438629 CDK16Q00536 496 aa2.63□□□□□ -1.99
LSM1P1-201ENST00000438629 IRF8Q02556 426 aa2.63□□□□□ -1.99
LSM1P1-201ENST00000438629 C2orf54Q08AI8 447 aa2.63□□□□□ -1.99
LSM1P1-201ENST00000438629 CDH17Q12864 832 aa2.63□□□□□ -1.99
LSM1P1-201ENST00000438629 KLRB1Q12918 225 aa2.63□□□□□ -1.99
LSM1P1-201ENST00000438629 TSPAN31Q12999 210 aa2.63□□□□□ -1.99
LSM1P1-201ENST00000438629 SLAMF1Q13291 335 aa2.63□□□□□ -1.99
LSM1P1-201ENST00000438629 C1orf61Q13536 156 aa2.63□□□□□ -1.99
LSM1P1-201ENST00000438629 C18orf21Q32NC0 220 aaPredicted RBP2.63□□□□□ -1.99
LSM1P1-201ENST00000438629 TIGITQ495A1 244 aa2.63□□□□□ -1.99
LSM1P1-201ENST00000438629 PTPN20Q4JDL3 420 aa2.63□□□□□ -1.99
LSM1P1-201ENST00000438629 TMEM52BQ4KMG9 183 aa2.63□□□□□ -1.99
LSM1P1-201ENST00000438629 C2orf83Q53S99 150 aa2.63□□□□□ -1.99
LSM1P1-201ENST00000438629 C22orf42Q6IC83 251 aa2.63□□□□□ -1.99
LSM1P1-201ENST00000438629 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.63□□□□□ -1.99
LSM1P1-201ENST00000438629 ULK3Q6PHR2 472 aa2.63□□□□□ -1.99
LSM1P1-201ENST00000438629 SLC16A14Q7RTX9 510 aa2.63□□□□□ -1.99
LSM1P1-201ENST00000438629 GID4Q8IVV7 300 aa2.63□□□□□ -1.99
LSM1P1-201ENST00000438629 SVOPLQ8N434 492 aa2.63□□□□□ -1.99
LSM1P1-201ENST00000438629 C17orf78Q8N4C9 275 aa2.63□□□□□ -1.99
LSM1P1-201ENST00000438629 JAGN1Q8N5M9 183 aa2.63□□□□□ -1.99
LSM1P1-201ENST00000438629 TRAM1L1Q8N609 369 aa2.63□□□□□ -1.99
LSM1P1-201ENST00000438629 CYB561A3Q8NBI2 242 aa2.63□□□□□ -1.99
LSM1P1-201ENST00000438629 C19orf18Q8NEA5 215 aa2.63□□□□□ -1.99
LSM1P1-201ENST00000438629 B3GNT7Q8NFL0 401 aa2.63□□□□□ -1.99
LSM1P1-201ENST00000438629 OR5D18Q8NGL1 313 aa2.63□□□□□ -1.99
LSM1P1-201ENST00000438629 OR9G4Q8NGQ1 327 aa2.63□□□□□ -1.99
LSM1P1-201ENST00000438629 OR6Q1Q8NGQ2 317 aa2.63□□□□□ -1.99
LSM1P1-201ENST00000438629 PYDC1Q8WXC3 89 aa2.63□□□□□ -1.99
LSM1P1-201ENST00000438629 NRGNQ92686 78 aa2.63□□□□□ -1.99
LSM1P1-201ENST00000438629 GTF2H4Q92759 462 aa2.63□□□□□ -1.99
LSM1P1-201ENST00000438629 NTAN1Q96AB6 310 aa2.63□□□□□ -1.99
LSM1P1-201ENST00000438629 C9orf72Q96LT7 481 aa2.63□□□□□ -1.99
LSM1P1-201ENST00000438629 ZNF641Q96N77 438 aaPredicted RBP2.63□□□□□ -1.99
LSM1P1-201ENST00000438629 CNN2Q99439 309 aaKnown RBP2.63□□□□□ -1.99
LSM1P1-201ENST00000438629 FMO2Q99518 471 aa2.63□□□□□ -1.99
LSM1P1-201ENST00000438629 MCHR1Q99705 422 aa2.63□□□□□ -1.99
LSM1P1-201ENST00000438629 CTRCQ99895 268 aa2.63□□□□□ -1.99
LSM1P1-201ENST00000438629 C7orf50Q9BRJ6 194 aaKnown RBP2.63□□□□□ -1.99
LSM1P1-201ENST00000438629 CHIAQ9BZP6 476 aa2.63□□□□□ -1.99
LSM1P1-201ENST00000438629 SLC22A4Q9H015 551 aa2.63□□□□□ -1.99
LSM1P1-201ENST00000438629 PPA2Q9H2U2 334 aa2.63□□□□□ -1.99
LSM1P1-201ENST00000438629 SLC38A10Q9HBR0 1119 aa2.63□□□□□ -1.99
LSM1P1-201ENST00000438629 POPDC2Q9HBU9 364 aa2.63□□□□□ -1.99
LSM1P1-201ENST00000438629 MYOZ2Q9NPC6 264 aa2.63□□□□□ -1.99
LSM1P1-201ENST00000438629 DIABLOQ9NR28 239 aa2.63□□□□□ -1.99
LSM1P1-201ENST00000438629 CMTM6Q9NX76 183 aa2.63□□□□□ -1.99
LSM1P1-201ENST00000438629 B3GNT2Q9NY97 397 aa2.63□□□□□ -1.99
LSM1P1-201ENST00000438629 PTTG3PQ9NZH4 202 aa2.63□□□□□ -1.99
LSM1P1-201ENST00000438629 BTNL2Q9UIR0 455 aa2.63□□□□□ -1.99
LSM1P1-201ENST00000438629 C3orf18Q9UK00 162 aa2.63□□□□□ -1.99
LSM1P1-201ENST00000438629 SCML2Q9UQR0 700 aa2.63□□□□□ -1.99
LSM1P1-201ENST00000438629 FAM32AQ9Y421 112 aaKnown RBP2.63□□□□□ -1.99
LSM1P1-201ENST00000438629 FADS3Q9Y5Q0 445 aa2.63□□□□□ -1.99
LSM1P1-201ENST00000438629 MROH7-TTC4A0A0A0MT08 1334 aa2.63□□□□□ -1.99
LSM1P1-201ENST00000438629 UBN2Q6ZU65 1347 aa2.63□□□□□ -1.99
LSM1P1-201ENST00000438629 CCNB3Q8WWL7 1395 aa2.62□□□□□ -1.99
LSM1P1-201ENST00000438629 MAP3K5Q99683 1374 aa2.62□□□□□ -1.99
LSM1P1-201ENST00000438629 KCNE1BA0A087WTH5 132 aa2.62□□□□□ -1.99
LSM1P1-201ENST00000438629 A0A1B0GW15 77 aa2.62□□□□□ -1.99
LSM1P1-201ENST00000438629 GNG14A0A1W2PPG7 69 aa2.62□□□□□ -1.99
LSM1P1-201ENST00000438629 FAM231BA6NCW3 169 aa2.62□□□□□ -1.99
LSM1P1-201ENST00000438629 ZNF705EA8MWA4 302 aaPredicted RBP2.62□□□□□ -1.99
LSM1P1-201ENST00000438629 TRIM49D1C9J1S8 452 aa2.62□□□□□ -1.99
LSM1P1-201ENST00000438629 G3V4G9 280 aa2.62□□□□□ -1.99
LSM1P1-201ENST00000438629 SMLR1H3BR10 107 aa2.62□□□□□ -1.99
LSM1P1-201ENST00000438629 H7C0C1 242 aa2.62□□□□□ -1.99
LSM1P1-201ENST00000438629 M0R3G1 203 aa2.62□□□□□ -1.99
LSM1P1-201ENST00000438629 SIRPB1O00241 398 aa2.62□□□□□ -1.99
LSM1P1-201ENST00000438629 LAD1O00515 517 aa2.62□□□□□ -1.99
LSM1P1-201ENST00000438629 DLGAP1O14490 977 aa2.62□□□□□ -1.99
LSM1P1-201ENST00000438629 SLC9A3R1O14745 358 aaPredicted RBP2.62□□□□□ -1.99
LSM1P1-201ENST00000438629 LIN7AO14910 233 aaPredicted RBP2.62□□□□□ -1.99
LSM1P1-201ENST00000438629 SOX15O60248 233 aa2.62□□□□□ -1.99
LSM1P1-201ENST00000438629 RAMP3O60896 148 aa2.62□□□□□ -1.99
LSM1P1-201ENST00000438629 SUPT3HO75486 399 aa2.62□□□□□ -1.99
LSM1P1-201ENST00000438629 BRI3O95415 125 aa2.62□□□□□ -1.99
LSM1P1-201ENST00000438629 TMEM50AO95807 157 aa2.62□□□□□ -1.99
LSM1P1-201ENST00000438629 IGHV3-48P01763 117 aa2.62□□□□□ -1.99
LSM1P1-201ENST00000438629 P04436 131 aa2.62□□□□□ -1.99
LSM1P1-201ENST00000438629 UBCP0CG48 685 aaKnown RBP2.62□□□□□ -1.99
LSM1P1-201ENST00000438629 MGMTP16455 207 aa2.62□□□□□ -1.99
LSM1P1-201ENST00000438629 IL12AP29459 219 aa2.62□□□□□ -1.99
LSM1P1-201ENST00000438629 SERPINB1P30740 379 aa2.62□□□□□ -1.99
LSM1P1-201ENST00000438629 HNRNPH3P31942 346 aaKnown RBP2.62□□□□□ -1.99
LSM1P1-201ENST00000438629 PCK1P35558 622 aa2.62□□□□□ -1.99
LSM1P1-201ENST00000438629 P2RY2P41231 377 aa2.62□□□□□ -1.99
LSM1P1-201ENST00000438629 SLC1A2P43004 574 aa2.62□□□□□ -1.99
LSM1P1-201ENST00000438629 CAPZBP47756 277 aa2.62□□□□□ -1.99
LSM1P1-201ENST00000438629 CXCR4P61073 352 aa2.62□□□□□ -1.99
LSM1P1-201ENST00000438629 EGFEM1PQ0D2K5 195 aa2.62□□□□□ -1.99
LSM1P1-201ENST00000438629 GRB7Q14451 532 aa2.62□□□□□ -1.99
LSM1P1-201ENST00000438629 ARL6IP1Q15041 203 aa2.62□□□□□ -1.99
LSM1P1-201ENST00000438629 C5orf64Q2M2E5 130 aa2.62□□□□□ -1.99
LSM1P1-201ENST00000438629 SLC25A52Q3SY17 297 aa2.62□□□□□ -1.99
LSM1P1-201ENST00000438629 TP53I3Q53FA7 332 aa2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms