RNA–Protein interactions for RNA: ENST00000437951.5

PTCH1-209, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,049 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-209ENST00000437951 FAM189BP81408 668 aa10.61□□□□□ -0.71
PTCH1-209ENST00000437951 TIMM29Q9BSF4 260 aa10.61□□□□□ -0.71
PTCH1-209ENST00000437951 BOKQ9UMX3 212 aaPredicted RBP10.61□□□□□ -0.71
PTCH1-209ENST00000437951 IGHEP01854 428 aa10.61□□□□□ -0.71
PTCH1-209ENST00000437951 RBP2P50120 134 aa10.61□□□□□ -0.71
PTCH1-209ENST00000437951 OR5I1Q13606 314 aa10.61□□□□□ -0.71
PTCH1-209ENST00000437951 LHFPL2Q6ZUX7 228 aa10.61□□□□□ -0.71
PTCH1-209ENST00000437951 RNF175Q8N4F7 328 aa10.61□□□□□ -0.71
PTCH1-209ENST00000437951 DTWD2Q8NBA8 298 aa10.61□□□□□ -0.71
PTCH1-209ENST00000437951 TMEM191AQ9H0A3 160 aa10.61□□□□□ -0.71
PTCH1-209ENST00000437951 NARFLQ9H6Q4 476 aa10.61□□□□□ -0.71
PTCH1-209ENST00000437951 SNRPEP62304 92 aaKnown RBP10.61□□□□□ -0.71
PTCH1-209ENST00000437951 KCNJ10P78508 379 aa10.61□□□□□ -0.71
PTCH1-209ENST00000437951 OR52R1Q8NGF1 315 aa10.61□□□□□ -0.71
PTCH1-209ENST00000437951 BARX1Q9HBU1 254 aaPredicted RBP10.61□□□□□ -0.71
PTCH1-209ENST00000437951 TREX1Q9NSU2 369 aa10.61□□□□□ -0.71
PTCH1-209ENST00000437951 SLCO1B1Q9Y6L6 691 aa10.61□□□□□ -0.71
PTCH1-209ENST00000437951 A0A1B0GTW7 788 aa10.61□□□□□ -0.71
PTCH1-209ENST00000437951 TCRBV21S2A2A0A5A6 115 aa10.61□□□□□ -0.71
PTCH1-209ENST00000437951 CST4P01036 141 aa10.61□□□□□ -0.71
PTCH1-209ENST00000437951 SULT1A3P0DMM9 295 aa10.61□□□□□ -0.71
PTCH1-209ENST00000437951 SULT1A4P0DMN0 295 aa10.61□□□□□ -0.71
PTCH1-209ENST00000437951 RPL29P47914 159 aaKnown RBP10.61□□□□□ -0.71
PTCH1-209ENST00000437951 SRP9P49458 86 aaKnown RBP10.61□□□□□ -0.71
PTCH1-209ENST00000437951 EXT1Q16394 746 aa10.61□□□□□ -0.71
PTCH1-209ENST00000437951 C11orf87Q6NUJ2 197 aa10.61□□□□□ -0.71
PTCH1-209ENST00000437951 TMEM184AQ6ZMB5 413 aa10.61□□□□□ -0.71
PTCH1-209ENST00000437951 LRP11Q86VZ4 500 aa10.61□□□□□ -0.71
PTCH1-209ENST00000437951 GJC3Q8NFK1 279 aa10.61□□□□□ -0.71
PTCH1-209ENST00000437951 SORBS1Q9BX66 1292 aaKnown RBP10.61□□□□□ -0.71
PTCH1-209ENST00000437951 ZNF816-ZNF321PA0A0X1KG74 233 aa10.6□□□□□ -0.71
PTCH1-209ENST00000437951 LRRC3CA6NJW4 275 aa10.6□□□□□ -0.71
PTCH1-209ENST00000437951 SEMA7AO75326 666 aa10.6□□□□□ -0.71
PTCH1-209ENST00000437951 GJA4P35212 333 aa10.6□□□□□ -0.71
PTCH1-209ENST00000437951 BMI1P35226 326 aa10.6□□□□□ -0.71
PTCH1-209ENST00000437951 HTR6P50406 440 aa10.6□□□□□ -0.71
PTCH1-209ENST00000437951 ADPRHP54922 357 aa10.6□□□□□ -0.71
PTCH1-209ENST00000437951 COL5A1-AS1Q5SY13 56 aa10.6□□□□□ -0.71
PTCH1-209ENST00000437951 OSTM1Q86WC4 334 aa10.6□□□□□ -0.71
PTCH1-209ENST00000437951 SLC38A9Q8NBW4 561 aa10.6□□□□□ -0.71
PTCH1-209ENST00000437951 TMEM9BQ9NQ34 198 aa10.6□□□□□ -0.71
PTCH1-209ENST00000437951 H0YIV9 168 aa10.6□□□□□ -0.71
PTCH1-209ENST00000437951 ENSAO43768 121 aaKnown RBP10.6□□□□□ -0.71
PTCH1-209ENST00000437951 SOD2P04179 222 aa10.6□□□□□ -0.71
PTCH1-209ENST00000437951 PMCHP20382 165 aa10.6□□□□□ -0.71
PTCH1-209ENST00000437951 HIST1H1TP22492 207 aaPredicted RBP10.6□□□□□ -0.71
PTCH1-209ENST00000437951 ABCD3P28288 659 aa10.6□□□□□ -0.71
PTCH1-209ENST00000437951 FOLR3P41439 243 aa10.6□□□□□ -0.71
PTCH1-209ENST00000437951 CARD18P57730 90 aa10.6□□□□□ -0.71
PTCH1-209ENST00000437951 HERVK_113P61574 105 aa10.6□□□□□ -0.71
PTCH1-209ENST00000437951 DLK1P80370 383 aa10.6□□□□□ -0.71
PTCH1-209ENST00000437951 GLIPR1L1Q6UWM5 242 aa10.6□□□□□ -0.71
PTCH1-209ENST00000437951 KIAA1958Q8N8K9 716 aa10.6□□□□□ -0.71
PTCH1-209ENST00000437951 UBALD1Q8TB05 177 aa10.6□□□□□ -0.71
PTCH1-209ENST00000437951 SIRT7Q9NRC8 400 aa10.6□□□□□ -0.71
PTCH1-209ENST00000437951 HSPB8Q9UJY1 196 aa10.6□□□□□ -0.71
PTCH1-209ENST00000437951 DEGS1O15121 323 aa10.6□□□□□ -0.71
PTCH1-209ENST00000437951 SOX15O60248 233 aa10.6□□□□□ -0.71
PTCH1-209ENST00000437951 NXPH2O95156 264 aa10.6□□□□□ -0.71
PTCH1-209ENST00000437951 CLDN12P56749 244 aa10.6□□□□□ -0.71
PTCH1-209ENST00000437951 OR52I2Q8NH67 350 aa10.6□□□□□ -0.71
PTCH1-209ENST00000437951 MAP1LC3CQ9BXW4 147 aa10.6□□□□□ -0.71
PTCH1-209ENST00000437951 PIGLQ9Y2B2 252 aa10.6□□□□□ -0.71
PTCH1-209ENST00000437951 ST8SIA5O15466 376 aa10.6□□□□□ -0.71
PTCH1-209ENST00000437951 ALDOCP09972 364 aaKnown RBP10.6□□□□□ -0.71
PTCH1-209ENST00000437951 HHEXQ03014 270 aa10.6□□□□□ -0.71
PTCH1-209ENST00000437951 SPRYD7Q5W111 196 aa10.6□□□□□ -0.71
PTCH1-209ENST00000437951 VRK2Q86Y07 508 aa10.6□□□□□ -0.71
PTCH1-209ENST00000437951 ARRDC2Q8TBH0 407 aa10.6□□□□□ -0.71
PTCH1-209ENST00000437951 CMBLQ96DG6 245 aa10.6□□□□□ -0.71
PTCH1-209ENST00000437951 FAM210BQ96KR6 192 aa10.6□□□□□ -0.71
PTCH1-209ENST00000437951 SFXN1Q9H9B4 322 aa10.6□□□□□ -0.71
PTCH1-209ENST00000437951 AIFM1O95831 613 aa10.6□□□□□ -0.71
PTCH1-209ENST00000437951 HNRNPA1P09651 372 aaKnown RBP eCLIP10.6□□□□□ -0.71
PTCH1-209ENST00000437951 FOXA1P55317 472 aa10.6□□□□□ -0.71
PTCH1-209ENST00000437951 MAT1AQ00266 395 aaKnown RBP10.6□□□□□ -0.71
PTCH1-209ENST00000437951 ZNF761Q86XN6 746 aaPredicted RBP10.6□□□□□ -0.71
PTCH1-209ENST00000437951 SPICQ8N5J4 248 aa10.6□□□□□ -0.71
PTCH1-209ENST00000437951 SLC38A5Q8WUX1 472 aa10.6□□□□□ -0.71
PTCH1-209ENST00000437951 OR5M11Q96RB7 305 aa10.6□□□□□ -0.71
PTCH1-209ENST00000437951 ASIC5Q9NY37 505 aa10.6□□□□□ -0.71
PTCH1-209ENST00000437951 EMCNQ9ULC0 261 aa10.6□□□□□ -0.71
PTCH1-209ENST00000437951 BMPR1BO00238 502 aa10.6□□□□□ -0.71
PTCH1-209ENST00000437951 SLC25A6P12236 298 aa10.6□□□□□ -0.71
PTCH1-209ENST00000437951 ICAM2P13598 275 aa10.6□□□□□ -0.71
PTCH1-209ENST00000437951 BMPR1AP36894 532 aa10.6□□□□□ -0.71
PTCH1-209ENST00000437951 TPBGQ13641 420 aa10.6□□□□□ -0.71
PTCH1-209ENST00000437951 GRASPQ7Z6J2 395 aaPredicted RBP10.6□□□□□ -0.71
PTCH1-209ENST00000437951 HGDQ93099 445 aa10.6□□□□□ -0.71
PTCH1-209ENST00000437951 ZNF426Q9BUY5 554 aa10.6□□□□□ -0.71
PTCH1-209ENST00000437951 ZNF552Q9H707 407 aaPredicted RBP10.6□□□□□ -0.71
PTCH1-209ENST00000437951 NXT1Q9UKK6 140 aaKnown RBP10.6□□□□□ -0.71
PTCH1-209ENST00000437951 TRAV1-2A0A0B4J238 106 aa10.59□□□□□ -0.71
PTCH1-209ENST00000437951 A0A0G2JLL6 359 aaPredicted RBP10.59□□□□□ -0.71
PTCH1-209ENST00000437951 KIR2DL3P43628 341 aa10.59□□□□□ -0.71
PTCH1-209ENST00000437951 PSMB2P49721 201 aa10.59□□□□□ -0.71
PTCH1-209ENST00000437951 HLA-BQ31612 363 aa10.59□□□□□ -0.71
PTCH1-209ENST00000437951 FCRL6Q6DN72 434 aa10.59□□□□□ -0.71
PTCH1-209ENST00000437951 PRRT2Q7Z6L0 340 aaPredicted RBP10.59□□□□□ -0.71
PTCH1-209ENST00000437951 GPR87Q9BY21 358 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms