RNA–Protein interactions for RNA: ENST00000435823.1

COL28A1-203, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL28A1, Length 678 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-203ENST00000435823 OR51B6Q9H340 312 aa9.87□□□□□ -0.83
COL28A1-203ENST00000435823 FN3KQ9H479 309 aa9.87□□□□□ -0.83
COL28A1-203ENST00000435823 PLEK2Q9NYT0 353 aa9.87□□□□□ -0.83
COL28A1-203ENST00000435823 ASH2LQ9UBL3 628 aa9.87□□□□□ -0.83
COL28A1-203ENST00000435823 AP4S1Q9Y587 144 aa9.87□□□□□ -0.83
COL28A1-203ENST00000435823 F8P00451 2351 aa9.87□□□□□ -0.83
COL28A1-203ENST00000435823 RIIAD1A6NNX1 92 aa9.86□□□□□ -0.83
COL28A1-203ENST00000435823 DCTN6O00399 190 aa9.86□□□□□ -0.83
COL28A1-203ENST00000435823 SGCEO43556 437 aa9.86□□□□□ -0.83
COL28A1-203ENST00000435823 SSX4O60224 188 aa9.86□□□□□ -0.83
COL28A1-203ENST00000435823 COX5BP10606 129 aa9.86□□□□□ -0.83
COL28A1-203ENST00000435823 POU1F1P28069 291 aa9.86□□□□□ -0.83
COL28A1-203ENST00000435823 GRK5P34947 590 aa9.86□□□□□ -0.83
COL28A1-203ENST00000435823 HTR5AP47898 357 aa9.86□□□□□ -0.83
COL28A1-203ENST00000435823 EVX1P49640 407 aa9.86□□□□□ -0.83
COL28A1-203ENST00000435823 EFNA4P52798 201 aa9.86□□□□□ -0.83
COL28A1-203ENST00000435823 UCP2P55851 309 aa9.86□□□□□ -0.83
COL28A1-203ENST00000435823 CCNIQ14094 377 aa9.86□□□□□ -0.83
COL28A1-203ENST00000435823 ATP6AP1Q15904 470 aa9.86□□□□□ -0.83
COL28A1-203ENST00000435823 ARL9Q6T311 187 aa9.86□□□□□ -0.83
COL28A1-203ENST00000435823 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.86□□□□□ -0.83
COL28A1-203ENST00000435823 HIPK1Q86Z02 1210 aa9.86□□□□□ -0.83
COL28A1-203ENST00000435823 C1orf174Q8IYL3 243 aa9.86□□□□□ -0.83
COL28A1-203ENST00000435823 HS3ST5Q8IZT8 346 aa9.86□□□□□ -0.83
COL28A1-203ENST00000435823 CYB561A3Q8NBI2 242 aa9.86□□□□□ -0.83
COL28A1-203ENST00000435823 OR4Q3Q8NH05 313 aa9.86□□□□□ -0.83
COL28A1-203ENST00000435823 OR5K1Q8NHB7 308 aa9.86□□□□□ -0.83
COL28A1-203ENST00000435823 DNAJC9Q8WXX5 260 aa9.86□□□□□ -0.83
COL28A1-203ENST00000435823 UTP4Q969X6 686 aaKnown RBP9.86□□□□□ -0.83
COL28A1-203ENST00000435823 DUS3LQ96G46 650 aaKnown RBP9.86□□□□□ -0.83
COL28A1-203ENST00000435823 C18orf12Q96KH6 178 aa9.86□□□□□ -0.83
COL28A1-203ENST00000435823 DOK1Q99704 481 aa9.86□□□□□ -0.83
COL28A1-203ENST00000435823 SYT3Q9BQG1 590 aa9.86□□□□□ -0.83
COL28A1-203ENST00000435823 CDADC1Q9BWV3 514 aa9.86□□□□□ -0.83
COL28A1-203ENST00000435823 TEX12Q9BXU0 123 aa9.86□□□□□ -0.83
COL28A1-203ENST00000435823 MRPL37Q9BZE1 423 aaKnown RBP9.86□□□□□ -0.83
COL28A1-203ENST00000435823 RAB1BQ9H0U4 201 aa9.86□□□□□ -0.83
COL28A1-203ENST00000435823 REV1Q9UBZ9 1251 aa9.86□□□□□ -0.83
COL28A1-203ENST00000435823 DUSP13Q9UII6 198 aa9.86□□□□□ -0.83
COL28A1-203ENST00000435823 GPR160Q9UJ42 338 aa9.86□□□□□ -0.83
COL28A1-203ENST00000435823 LOC100509620A0A075B734 347 aa9.85□□□□□ -0.83
COL28A1-203ENST00000435823 A0A1W2PPW3 197 aa9.85□□□□□ -0.83
COL28A1-203ENST00000435823 TRIM64A6NGJ6 449 aa9.85□□□□□ -0.83
COL28A1-203ENST00000435823 TRIM64BA6NI03 449 aa9.85□□□□□ -0.83
COL28A1-203ENST00000435823 FAM171A2A8MVW0 826 aa9.85□□□□□ -0.83
COL28A1-203ENST00000435823 H7C1Q1 480 aa9.85□□□□□ -0.83
COL28A1-203ENST00000435823 SYNGR3O43761 229 aa9.85□□□□□ -0.83
COL28A1-203ENST00000435823 GPANK1O95872 356 aa9.85□□□□□ -0.83
COL28A1-203ENST00000435823 TP53P04637 393 aaPredicted RBP9.85□□□□□ -0.83
COL28A1-203ENST00000435823 CSF3P09919 207 aa9.85□□□□□ -0.83
COL28A1-203ENST00000435823 OSMP13725 252 aa9.85□□□□□ -0.83
COL28A1-203ENST00000435823 ZNF823P16415 610 aa9.85□□□□□ -0.83
COL28A1-203ENST00000435823 ZNF3P17036 446 aa9.85□□□□□ -0.83
COL28A1-203ENST00000435823 PRKACGP22612 351 aa9.85□□□□□ -0.83
COL28A1-203ENST00000435823 KLF3P57682 345 aaPredicted RBP9.85□□□□□ -0.83
COL28A1-203ENST00000435823 DSCR9P59020 149 aa9.85□□□□□ -0.83
COL28A1-203ENST00000435823 TEKQ02763 1124 aa9.85□□□□□ -0.83
COL28A1-203ENST00000435823 CRMP1Q14194 572 aa9.85□□□□□ -0.83
COL28A1-203ENST00000435823 MOGQ16653 247 aa9.85□□□□□ -0.83
COL28A1-203ENST00000435823 MEP1BQ16820 701 aa9.85□□□□□ -0.83
COL28A1-203ENST00000435823 OTPQ5XKR4 325 aa9.85□□□□□ -0.83
COL28A1-203ENST00000435823 SLC27A4Q6P1M0 643 aa9.85□□□□□ -0.83
COL28A1-203ENST00000435823 CLEC2AQ6UVW9 174 aa9.85□□□□□ -0.83
COL28A1-203ENST00000435823 VASH1Q7L8A9 365 aaPredicted RBP9.85□□□□□ -0.83
COL28A1-203ENST00000435823 GJC3Q8NFK1 279 aa9.85□□□□□ -0.83
COL28A1-203ENST00000435823 SLC26A10Q8NG04 563 aa9.85□□□□□ -0.83
COL28A1-203ENST00000435823 OR1J1Q8NGS3 322 aa9.85□□□□□ -0.83
COL28A1-203ENST00000435823 OR2AJ1Q8NGZ0 328 aa9.85□□□□□ -0.83
COL28A1-203ENST00000435823 SYNPRQ8TBG9 265 aa9.85□□□□□ -0.83
COL28A1-203ENST00000435823 C4orf45Q96LM5 186 aa9.85□□□□□ -0.83
COL28A1-203ENST00000435823 SORCS2Q96PQ0 1159 aa9.85□□□□□ -0.83
COL28A1-203ENST00000435823 RHNO1Q9BSD3 238 aa9.85□□□□□ -0.83
COL28A1-203ENST00000435823 ELOVL3Q9HB03 270 aa9.85□□□□□ -0.83
COL28A1-203ENST00000435823 NTN4Q9HB63 628 aa9.85□□□□□ -0.83
COL28A1-203ENST00000435823 CMC2Q9NRP2 79 aa9.85□□□□□ -0.83
COL28A1-203ENST00000435823 KCNG2Q9UJ96 466 aa9.85□□□□□ -0.83
COL28A1-203ENST00000435823 FZR1Q9UM11 496 aa9.85□□□□□ -0.83
COL28A1-203ENST00000435823 MED13LQ71F56 2210 aa9.84□□□□□ -0.83
COL28A1-203ENST00000435823 ARFGEF3Q5TH69 2177 aa9.84□□□□□ -0.83
COL28A1-203ENST00000435823 FLNAP21333 2647 aaKnown RBP9.84□□□□□ -0.83
COL28A1-203ENST00000435823 TMEM129A0AVI4 362 aa9.84□□□□□ -0.83
COL28A1-203ENST00000435823 M0R233 179 aa9.84□□□□□ -0.83
COL28A1-203ENST00000435823 RER1O15258 196 aa9.84□□□□□ -0.83
COL28A1-203ENST00000435823 ABHD16AO95870 558 aa9.84□□□□□ -0.83
COL28A1-203ENST00000435823 F12P00748 615 aaPredicted RBP9.84□□□□□ -0.83
COL28A1-203ENST00000435823 TFP02787 698 aa9.84□□□□□ -0.83
COL28A1-203ENST00000435823 HMGN1P05114 100 aa9.84□□□□□ -0.83
COL28A1-203ENST00000435823 INHBBP09529 407 aa9.84□□□□□ -0.83
COL28A1-203ENST00000435823 ZNF23P17027 643 aa9.84□□□□□ -0.83
COL28A1-203ENST00000435823 PAICSP22234 425 aaKnown RBP9.84□□□□□ -0.83
COL28A1-203ENST00000435823 GCH1P30793 250 aa9.84□□□□□ -0.83
COL28A1-203ENST00000435823 FMO3P31513 532 aa9.84□□□□□ -0.83
COL28A1-203ENST00000435823 PYCR1P32322 319 aa9.84□□□□□ -0.83
COL28A1-203ENST00000435823 BLVRAP53004 296 aa9.84□□□□□ -0.83
COL28A1-203ENST00000435823 SLC25A1P53007 311 aa9.84□□□□□ -0.83
COL28A1-203ENST00000435823 ERVS71-1P61550 626 aa9.84□□□□□ -0.83
COL28A1-203ENST00000435823 TNK1Q13470 666 aa9.84□□□□□ -0.83
COL28A1-203ENST00000435823 GINS1Q14691 196 aa9.84□□□□□ -0.83
COL28A1-203ENST00000435823 NKPD1Q17RQ9 610 aa9.84□□□□□ -0.83
COL28A1-203ENST00000435823 ZNF718Q3SXZ3 478 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms