RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 NRASP01111 189 aa10.25□□□□□ -0.77
SCN4A-201ENST00000435607 GCSHP23434 173 aa10.25□□□□□ -0.77
SCN4A-201ENST00000435607 ELLP55199 621 aaPredicted RBP10.25□□□□□ -0.77
SCN4A-201ENST00000435607 GLYATL3Q5SZD4 288 aa10.25□□□□□ -0.77
SCN4A-201ENST00000435607 GALMQ96C23 342 aa10.25□□□□□ -0.77
SCN4A-201ENST00000435607 TMEM231Q9H6L2 316 aa10.25□□□□□ -0.77
SCN4A-201ENST00000435607 FBXO34Q9NWN3 711 aa10.25□□□□□ -0.77
SCN4A-201ENST00000435607 SYT5O00445 386 aa10.25□□□□□ -0.77
SCN4A-201ENST00000435607 ADAM11O75078 769 aa10.25□□□□□ -0.77
SCN4A-201ENST00000435607 FAM157BP0CG42 384 aa10.25□□□□□ -0.77
SCN4A-201ENST00000435607 BRS3P32247 399 aa10.25□□□□□ -0.77
SCN4A-201ENST00000435607 CSNK1G2P78368 415 aa10.25□□□□□ -0.77
SCN4A-201ENST00000435607 TAS1R1Q7RTX1 841 aa10.25□□□□□ -0.77
SCN4A-201ENST00000435607 TMEM40Q8WWA1 233 aa10.25□□□□□ -0.77
SCN4A-201ENST00000435607 BCL2L2Q92843 193 aaPredicted RBP10.25□□□□□ -0.77
SCN4A-201ENST00000435607 RYDENQ9NUL5 291 aaKnown RBP10.25□□□□□ -0.77
SCN4A-201ENST00000435607 CCDC88CQ9P219 2028 aa10.25□□□□□ -0.77
SCN4A-201ENST00000435607 STRAPQ9Y3F4 350 aaKnown RBP10.25□□□□□ -0.77
SCN4A-201ENST00000435607 IGKV6-21A0A0C4DH24 114 aa10.25□□□□□ -0.77
SCN4A-201ENST00000435607 A0A1B0GWA3 101 aa10.25□□□□□ -0.77
SCN4A-201ENST00000435607 F5H697 171 aa10.25□□□□□ -0.77
SCN4A-201ENST00000435607 NME4O00746 187 aa10.25□□□□□ -0.77
SCN4A-201ENST00000435607 QDPRP09417 244 aa10.25□□□□□ -0.77
SCN4A-201ENST00000435607 PTGER1P34995 402 aa10.25□□□□□ -0.77
SCN4A-201ENST00000435607 ZNF385BQ569K4 471 aa10.25□□□□□ -0.77
SCN4A-201ENST00000435607 CBLL1Q75N03 491 aa10.25□□□□□ -0.77
SCN4A-201ENST00000435607 SPEM1Q8N4L4 309 aa10.25□□□□□ -0.77
SCN4A-201ENST00000435607 ARHGEF39Q8N4T4 335 aa10.25□□□□□ -0.77
SCN4A-201ENST00000435607 SFT2D1Q8WV19 159 aa10.25□□□□□ -0.77
SCN4A-201ENST00000435607 RAB1CQ92928 201 aa10.25□□□□□ -0.77
SCN4A-201ENST00000435607 AQP7P3A6NL99 342 aa10.25□□□□□ -0.77
SCN4A-201ENST00000435607 FAM90A27PA6NNH2 459 aa10.25□□□□□ -0.77
SCN4A-201ENST00000435607 NFATC3Q12968 1075 aa10.25□□□□□ -0.77
SCN4A-201ENST00000435607 PRTGQ2VWP7 1150 aa10.25□□□□□ -0.77
SCN4A-201ENST00000435607 HIST2H3AQ71DI3 136 aa10.25□□□□□ -0.77
SCN4A-201ENST00000435607 ENDOVQ8N8Q3 282 aaKnown RBP10.25□□□□□ -0.77
SCN4A-201ENST00000435607 ST8SIA1Q92185 356 aa10.25□□□□□ -0.77
SCN4A-201ENST00000435607 SEBOXQ9HB31 216 aaPredicted RBP10.25□□□□□ -0.77
SCN4A-201ENST00000435607 DCAF16Q9NXF7 216 aa10.25□□□□□ -0.77
SCN4A-201ENST00000435607 SLC17A4Q9Y2C5 497 aa10.25□□□□□ -0.77
SCN4A-201ENST00000435607 KIAA0100Q14667 2235 aaKnown RBP10.25□□□□□ -0.77
SCN4A-201ENST00000435607 ARNTLO00327 626 aa10.24□□□□□ -0.77
SCN4A-201ENST00000435607 SSTR4P31391 388 aa10.24□□□□□ -0.77
SCN4A-201ENST00000435607 GPR3P46089 330 aa10.24□□□□□ -0.77
SCN4A-201ENST00000435607 CDK5Q00535 292 aa10.24□□□□□ -0.77
SCN4A-201ENST00000435607 LRRC26Q2I0M4 334 aa10.24□□□□□ -0.77
SCN4A-201ENST00000435607 B3GNTL1Q67FW5 361 aaPredicted RBP10.24□□□□□ -0.77
SCN4A-201ENST00000435607 TMEM108Q6UXF1 575 aa10.24□□□□□ -0.77
SCN4A-201ENST00000435607 TMPRSS11FQ6ZWK6 438 aa10.24□□□□□ -0.77
SCN4A-201ENST00000435607 OR2G3Q8NGZ4 309 aa10.24□□□□□ -0.77
SCN4A-201ENST00000435607 LRRC15Q8TF66 581 aa10.24□□□□□ -0.77
SCN4A-201ENST00000435607 ELF4Q99607 663 aaPredicted RBP10.24□□□□□ -0.77
SCN4A-201ENST00000435607 TMEM147Q9BVK8 224 aa10.24□□□□□ -0.77
SCN4A-201ENST00000435607 TRGV5A0A0B4J1U4 118 aa10.24□□□□□ -0.77
SCN4A-201ENST00000435607 ACOD1A6NK06 481 aa10.24□□□□□ -0.77
SCN4A-201ENST00000435607 PPP5D1E7EU14 171 aa10.24□□□□□ -0.77
SCN4A-201ENST00000435607 BMP5P22003 454 aa10.24□□□□□ -0.77
SCN4A-201ENST00000435607 ACHEP22303 614 aa10.24□□□□□ -0.77
SCN4A-201ENST00000435607 ENDOGQ14249 297 aaKnown RBP10.24□□□□□ -0.77
SCN4A-201ENST00000435607 LILRB1Q8NHL6 650 aaPredicted RBP10.24□□□□□ -0.77
SCN4A-201ENST00000435607 DYNLRB2Q8TF09 96 aa10.24□□□□□ -0.77
SCN4A-201ENST00000435607 GNPNAT1Q96EK6 184 aaPredicted RBP10.24□□□□□ -0.77
SCN4A-201ENST00000435607 ZNF778Q96MU6 729 aa10.24□□□□□ -0.77
SCN4A-201ENST00000435607 LHX3Q9UBR4 397 aa10.24□□□□□ -0.77
SCN4A-201ENST00000435607 FAM208AQ9UK61 1670 aaKnown RBP10.24□□□□□ -0.77
SCN4A-201ENST00000435607 DRAM2Q6UX65 266 aa10.24□□□□□ -0.77
SCN4A-201ENST00000435607 ETFBKMTQ8IXQ9 262 aa10.24□□□□□ -0.77
SCN4A-201ENST00000435607 C11orf42Q8N5U0 333 aa10.24□□□□□ -0.77
SCN4A-201ENST00000435607 FAM3DQ96BQ1 224 aa10.24□□□□□ -0.77
SCN4A-201ENST00000435607 FCRL1Q96LA6 429 aa10.24□□□□□ -0.77
SCN4A-201ENST00000435607 ZBP1Q9H171 429 aa10.24□□□□□ -0.77
SCN4A-201ENST00000435607 NINQ8N4C6 2090 aa10.24□□□□□ -0.77
SCN4A-201ENST00000435607 SNED1Q8TER0 1413 aa10.24□□□□□ -0.77
SCN4A-201ENST00000435607 CRXO43186 299 aaPredicted RBP10.24□□□□□ -0.77
SCN4A-201ENST00000435607 HPP00738 406 aa10.24□□□□□ -0.77
SCN4A-201ENST00000435607 PAFAH1B2P68402 229 aa10.24□□□□□ -0.77
SCN4A-201ENST00000435607 ACSM5Q6NUN0 579 aa10.24□□□□□ -0.77
SCN4A-201ENST00000435607 TMEM64Q6YI46 380 aa10.24□□□□□ -0.77
SCN4A-201ENST00000435607 GTF2H5Q6ZYL4 71 aa10.24□□□□□ -0.77
SCN4A-201ENST00000435607 DYNC2LI1Q8TCX1 351 aa10.24□□□□□ -0.77
SCN4A-201ENST00000435607 YIPF5Q969M3 257 aa10.24□□□□□ -0.77
SCN4A-201ENST00000435607 RBM14Q96PK6 669 aaKnown RBP10.24□□□□□ -0.77
SCN4A-201ENST00000435607 GPR173Q9NS66 373 aa10.24□□□□□ -0.77
SCN4A-201ENST00000435607 ASIC5Q9NY37 505 aa10.24□□□□□ -0.77
SCN4A-201ENST00000435607 KCNMB2Q9Y691 235 aa10.24□□□□□ -0.77
SCN4A-201ENST00000435607 PRRC2BQ5JSZ5 2229 aaKnown RBP10.24□□□□□ -0.77
SCN4A-201ENST00000435607 PMS2P2O95744 297 aa10.24□□□□□ -0.77
SCN4A-201ENST00000435607 DEFA6Q01524 100 aa10.24□□□□□ -0.77
SCN4A-201ENST00000435607 WDTC1Q8N5D0 677 aa10.24□□□□□ -0.77
SCN4A-201ENST00000435607 PNPLA1Q8N8W4 532 aa10.24□□□□□ -0.77
SCN4A-201ENST00000435607 FBXO27Q8NI29 283 aa10.24□□□□□ -0.77
SCN4A-201ENST00000435607 RPL3LQ92901 407 aaKnown RBP10.24□□□□□ -0.77
SCN4A-201ENST00000435607 COL3A1P02461 1466 aaPredicted RBP10.24□□□□□ -0.77
SCN4A-201ENST00000435607 ZNF816-ZNF321PA0A0X1KG74 233 aa10.24□□□□□ -0.77
SCN4A-201ENST00000435607 CDX4O14627 284 aaPredicted RBP10.24□□□□□ -0.77
SCN4A-201ENST00000435607 ST8SIA3O43173 380 aa10.24□□□□□ -0.77
SCN4A-201ENST00000435607 DHRS4L1P0CG22 281 aa10.24□□□□□ -0.77
SCN4A-201ENST00000435607 KCNRGQ8N5I3 272 aa10.24□□□□□ -0.77
SCN4A-201ENST00000435607 OXGR1Q96P68 337 aa10.24□□□□□ -0.77
SCN4A-201ENST00000435607 KCNG2Q9UJ96 466 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms