RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 C19orf12Q9NSK7 152 aa6.77□□□□□ -1.33
CPSF6-202ENST00000435070 KCNG2Q9UJ96 466 aa6.77□□□□□ -1.33
CPSF6-202ENST00000435070 CA14Q9ULX7 337 aa6.77□□□□□ -1.33
CPSF6-202ENST00000435070 ZNF726A6NNF4 738 aa6.77□□□□□ -1.33
CPSF6-202ENST00000435070 B4DGG1 531 aa6.77□□□□□ -1.33
CPSF6-202ENST00000435070 NPIPB9F8W1W9 429 aa6.77□□□□□ -1.33
CPSF6-202ENST00000435070 IFNA6P05013 189 aa6.77□□□□□ -1.33
CPSF6-202ENST00000435070 CSNK2A2P19784 350 aaPredicted RBP6.77□□□□□ -1.33
CPSF6-202ENST00000435070 CSNK1EP49674 416 aaKnown RBP6.77□□□□□ -1.33
CPSF6-202ENST00000435070 TAS2R19P59542 299 aa6.77□□□□□ -1.33
CPSF6-202ENST00000435070 MRPL2Q5T653 305 aaKnown RBP6.77□□□□□ -1.33
CPSF6-202ENST00000435070 OR2L13Q8N349 312 aa6.77□□□□□ -1.33
CPSF6-202ENST00000435070 ADAD2Q8NCV1 583 aaKnown RBP6.77□□□□□ -1.33
CPSF6-202ENST00000435070 GPR148Q8TDV2 347 aa6.77□□□□□ -1.33
CPSF6-202ENST00000435070 RASD2Q96D21 266 aa6.77□□□□□ -1.33
CPSF6-202ENST00000435070 SOX7Q9BT81 388 aa6.77□□□□□ -1.33
CPSF6-202ENST00000435070 A0A1B0GTI1 187 aa6.76□□□□□ -1.33
CPSF6-202ENST00000435070 NPIPA2E9PIF3 369 aa6.76□□□□□ -1.33
CPSF6-202ENST00000435070 NPIPA5E9PKD4 350 aa6.76□□□□□ -1.33
CPSF6-202ENST00000435070 NPIPA3F8WFD2 350 aa6.76□□□□□ -1.33
CPSF6-202ENST00000435070 H0YIZ8 118 aa6.76□□□□□ -1.33
CPSF6-202ENST00000435070 K7ESM1 405 aa6.76□□□□□ -1.33
CPSF6-202ENST00000435070 CCKBRP32239 447 aa6.76□□□□□ -1.33
CPSF6-202ENST00000435070 SULT1A1P50225 295 aa6.76□□□□□ -1.33
CPSF6-202ENST00000435070 ZNF136P52737 540 aa6.76□□□□□ -1.33
CPSF6-202ENST00000435070 SPCS3P61009 180 aa6.76□□□□□ -1.33
CPSF6-202ENST00000435070 GAS6Q14393 721 aa6.76□□□□□ -1.33
CPSF6-202ENST00000435070 Q499Y3 187 aa6.76□□□□□ -1.33
CPSF6-202ENST00000435070 C14orf28Q4W4Y0 310 aa6.76□□□□□ -1.33
CPSF6-202ENST00000435070 C4orf17Q53FE4 359 aa6.76□□□□□ -1.33
CPSF6-202ENST00000435070 VITQ6UXI7 678 aa6.76□□□□□ -1.33
CPSF6-202ENST00000435070 OR7G2Q8NG99 324 aa6.76□□□□□ -1.33
CPSF6-202ENST00000435070 OR13C8Q8NGS7 320 aa6.76□□□□□ -1.33
CPSF6-202ENST00000435070 OR13C9Q8NGT0 318 aa6.76□□□□□ -1.33
CPSF6-202ENST00000435070 C15orf40Q8WUR7 153 aa6.76□□□□□ -1.33
CPSF6-202ENST00000435070 CMTM3Q96MX0 182 aa6.76□□□□□ -1.33
CPSF6-202ENST00000435070 KLF16Q9BXK1 252 aaPredicted RBP6.76□□□□□ -1.33
CPSF6-202ENST00000435070 EGLN1Q9GZT9 426 aa6.76□□□□□ -1.33
CPSF6-202ENST00000435070 NPIPA1Q9UND3 350 aa6.76□□□□□ -1.33
CPSF6-202ENST00000435070 FBXO7Q9Y3I1 522 aa6.76□□□□□ -1.33
CPSF6-202ENST00000435070 DCDC2BA2VCK2 349 aa6.76□□□□□ -1.33
CPSF6-202ENST00000435070 ZNF727A8MUV8 499 aa6.76□□□□□ -1.33
CPSF6-202ENST00000435070 H0Y8G0 127 aa6.76□□□□□ -1.33
CPSF6-202ENST00000435070 GPRIN2O60269 458 aa6.76□□□□□ -1.33
CPSF6-202ENST00000435070 CD14P08571 375 aa6.76□□□□□ -1.33
CPSF6-202ENST00000435070 HOXC4P09017 264 aaPredicted RBP6.76□□□□□ -1.33
CPSF6-202ENST00000435070 NSUN5P2Q63ZY6 315 aa6.76□□□□□ -1.33
CPSF6-202ENST00000435070 GVQW1Q8N7I0 195 aa6.76□□□□□ -1.33
CPSF6-202ENST00000435070 SLC30A7Q8NEW0 376 aa6.76□□□□□ -1.33
CPSF6-202ENST00000435070 OR2A12Q8NGT7 310 aa6.76□□□□□ -1.33
CPSF6-202ENST00000435070 ZNF689Q96CS4 500 aaPredicted RBP6.76□□□□□ -1.33
CPSF6-202ENST00000435070 PRSS16Q9NQE7 514 aa6.76□□□□□ -1.33
CPSF6-202ENST00000435070 CGGBP1Q9UFW8 167 aaPredicted RBP6.76□□□□□ -1.33
CPSF6-202ENST00000435070 LEFTY2O00292 366 aa6.76□□□□□ -1.33
CPSF6-202ENST00000435070 COX5BP10606 129 aa6.76□□□□□ -1.33
CPSF6-202ENST00000435070 FABP4P15090 132 aa6.76□□□□□ -1.33
CPSF6-202ENST00000435070 MAOAP21397 527 aa6.76□□□□□ -1.33
CPSF6-202ENST00000435070 SLC2A5P22732 501 aa6.76□□□□□ -1.33
CPSF6-202ENST00000435070 RNF4P78317 190 aa6.76□□□□□ -1.33
CPSF6-202ENST00000435070 ANKRD16Q6P6B7 361 aa6.76□□□□□ -1.33
CPSF6-202ENST00000435070 NRROSQ86YC3 692 aa6.76□□□□□ -1.33
CPSF6-202ENST00000435070 TMEM104Q8NE00 496 aa6.76□□□□□ -1.33
CPSF6-202ENST00000435070 OR51F2Q8NH61 342 aa6.76□□□□□ -1.33
CPSF6-202ENST00000435070 THOC3Q96J01 351 aaKnown RBP6.76□□□□□ -1.33
CPSF6-202ENST00000435070 CMKLR1Q99788 373 aa6.76□□□□□ -1.33
CPSF6-202ENST00000435070 OR5AC2Q9NZP5 309 aa6.76□□□□□ -1.33
CPSF6-202ENST00000435070 ITGA5P08648 1049 aa6.76□□□□□ -1.33
CPSF6-202ENST00000435070 SLC8B1Q6J4K2 584 aa6.76□□□□□ -1.33
CPSF6-202ENST00000435070 GDPD4Q6W3E5 623 aa6.76□□□□□ -1.33
CPSF6-202ENST00000435070 SPNS3Q6ZMD2 512 aa6.76□□□□□ -1.33
CPSF6-202ENST00000435070 RTN4RL1Q86UN2 441 aaPredicted RBP6.76□□□□□ -1.33
CPSF6-202ENST00000435070 ZNF611Q8N823 705 aa6.76□□□□□ -1.33
CPSF6-202ENST00000435070 FAM3DQ96BQ1 224 aa6.76□□□□□ -1.33
CPSF6-202ENST00000435070 SEH1LQ96EE3 360 aa6.76□□□□□ -1.33
CPSF6-202ENST00000435070 SLC25A21Q9BQT8 299 aaPredicted RBP6.76□□□□□ -1.33
CPSF6-202ENST00000435070 CYTL1Q9NRR1 136 aa6.76□□□□□ -1.33
CPSF6-202ENST00000435070 CRHP06850 196 aa6.76□□□□□ -1.33
CPSF6-202ENST00000435070 OR8G1Q15617 311 aa6.76□□□□□ -1.33
CPSF6-202ENST00000435070 RNASE10Q5GAN6 216 aaKnown RBP6.76□□□□□ -1.33
CPSF6-202ENST00000435070 DBX2Q6ZNG2 339 aa6.76□□□□□ -1.33
CPSF6-202ENST00000435070 SYS1Q8N2H4 156 aa6.76□□□□□ -1.33
CPSF6-202ENST00000435070 PAQR4Q8N4S7 273 aaPredicted RBP6.76□□□□□ -1.33
CPSF6-202ENST00000435070 ACBD4Q8NC06 268 aa6.76□□□□□ -1.33
CPSF6-202ENST00000435070 OR56A1Q8NGH5 318 aa6.76□□□□□ -1.33
CPSF6-202ENST00000435070 KXD1Q9BQD3 176 aa6.76□□□□□ -1.33
CPSF6-202ENST00000435070 DEC1Q9P2X7 70 aa6.76□□□□□ -1.33
CPSF6-202ENST00000435070 COL4A4P53420 1690 aaPredicted RBP6.76□□□□□ -1.33
CPSF6-202ENST00000435070 H7C1C5 153 aa6.76□□□□□ -1.33
CPSF6-202ENST00000435070 CYTIPO60759 359 aa6.76□□□□□ -1.33
CPSF6-202ENST00000435070 TSPAN15O95858 294 aa6.76□□□□□ -1.33
CPSF6-202ENST00000435070 SELPP16109 830 aa6.76□□□□□ -1.33
CPSF6-202ENST00000435070 PRLHRP49683 370 aa6.76□□□□□ -1.33
CPSF6-202ENST00000435070 ACTBP60709 375 aa6.76□□□□□ -1.33
CPSF6-202ENST00000435070 LCN6P62502 163 aa6.76□□□□□ -1.33
CPSF6-202ENST00000435070 ACTG1P63261 375 aa6.76□□□□□ -1.33
CPSF6-202ENST00000435070 AKR1C8PQ5T2L2 129 aa6.76□□□□□ -1.33
CPSF6-202ENST00000435070 OR14K1Q8NGZ2 314 aa6.76□□□□□ -1.33
CPSF6-202ENST00000435070 MITD1Q8WV92 249 aa6.76□□□□□ -1.33
CPSF6-202ENST00000435070 TFGQ92734 400 aaPredicted RBP6.76□□□□□ -1.33
CPSF6-202ENST00000435070 TMEM100Q9NV29 134 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms