RNA–Protein interactions for RNA: ENST00000433892.6

CD44-209, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,292 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-209ENST00000433892 RP2O75695 350 aa10.58□□□□□ -0.72
CD44-209ENST00000433892 RAB3DO95716 219 aa10.58□□□□□ -0.72
CD44-209ENST00000433892 LPLP06858 475 aa10.58□□□□□ -0.72
CD44-209ENST00000433892 DNASE1L1P49184 302 aa10.58□□□□□ -0.72
CD44-209ENST00000433892 MOGAT2Q3SYC2 334 aa10.58□□□□□ -0.72
CD44-209ENST00000433892 OGFOD3Q6PK18 319 aa10.58□□□□□ -0.72
CD44-209ENST00000433892 CORO6Q6QEF8 472 aa10.58□□□□□ -0.72
CD44-209ENST00000433892 GLRX5Q86SX6 157 aa10.58□□□□□ -0.72
CD44-209ENST00000433892 GALNT16Q8N428 558 aa10.58□□□□□ -0.72
CD44-209ENST00000433892 ZNF441Q8N8Z8 693 aa10.58□□□□□ -0.72
CD44-209ENST00000433892 ZNF248Q8NDW4 579 aa10.58□□□□□ -0.72
CD44-209ENST00000433892 THAP3Q8WTV1 239 aaPredicted RBP10.58□□□□□ -0.72
CD44-209ENST00000433892 PMEPA1Q969W9 287 aa10.58□□□□□ -0.72
CD44-209ENST00000433892 SLC41A2Q96JW4 573 aa10.58□□□□□ -0.72
CD44-209ENST00000433892 ARL5BQ96KC2 179 aa10.58□□□□□ -0.72
CD44-209ENST00000433892 CXorf58Q96LI9 332 aa10.58□□□□□ -0.72
CD44-209ENST00000433892 HHLA2Q9UM44 414 aa10.58□□□□□ -0.72
CD44-209ENST00000433892 R4GMQ9 66 aa10.58□□□□□ -0.72
CD44-209ENST00000433892 LOC101059948A0A1B0GTJ6 334 aa10.58□□□□□ -0.72
CD44-209ENST00000433892 LOC105371267A0A1B0GV96 52 aa10.58□□□□□ -0.72
CD44-209ENST00000433892 hCG_1807616A0A1W2PRN6 198 aa10.58□□□□□ -0.72
CD44-209ENST00000433892 FTCDNL1E5RQL4 147 aa10.58□□□□□ -0.72
CD44-209ENST00000433892 MS4A18H0YCH9 400 aa10.58□□□□□ -0.72
CD44-209ENST00000433892 OR2T1O43869 369 aa10.58□□□□□ -0.72
CD44-209ENST00000433892 SRSF10O75494 262 aaKnown RBP10.58□□□□□ -0.72
CD44-209ENST00000433892 IGHMP01871 453 aa10.58□□□□□ -0.72
CD44-209ENST00000433892 ITGB2P05107 769 aa10.58□□□□□ -0.72
CD44-209ENST00000433892 ZNF823P16415 610 aa10.58□□□□□ -0.72
CD44-209ENST00000433892 TAS2R19P59542 299 aa10.58□□□□□ -0.72
CD44-209ENST00000433892 MS4A18Q3C1V0 323 aa10.58□□□□□ -0.72
CD44-209ENST00000433892 ZNF454Q8N9F8 522 aa10.58□□□□□ -0.72
CD44-209ENST00000433892 OR6M1Q8NGM8 313 aa10.58□□□□□ -0.72
CD44-209ENST00000433892 STK35Q8TDR2 534 aa10.58□□□□□ -0.72
CD44-209ENST00000433892 SDHAF2Q9NX18 166 aa10.58□□□□□ -0.72
CD44-209ENST00000433892 OR52A1Q9UKL2 312 aa10.58□□□□□ -0.72
CD44-209ENST00000433892 CABIN1Q9Y6J0 2220 aa10.58□□□□□ -0.72
CD44-209ENST00000433892 FER1L5A0AVI2 2057 aa10.57□□□□□ -0.72
CD44-209ENST00000433892 IGKV1D-43A0A0B4J1Z2 117 aa10.57□□□□□ -0.72
CD44-209ENST00000433892 TMEM269A0A1B0GVZ9 245 aa10.57□□□□□ -0.72
CD44-209ENST00000433892 TUBAL3A6NHL2 446 aa10.57□□□□□ -0.72
CD44-209ENST00000433892 EIF1AYO14602 144 aaKnown RBP10.57□□□□□ -0.72
CD44-209ENST00000433892 ADAM10O14672 748 aa10.57□□□□□ -0.72
CD44-209ENST00000433892 ALOX12BO75342 701 aa10.57□□□□□ -0.72
CD44-209ENST00000433892 AMY2AP04746 511 aa10.57□□□□□ -0.72
CD44-209ENST00000433892 NMBP08949 121 aa10.57□□□□□ -0.72
CD44-209ENST00000433892 OR4E1P0C645 316 aa10.57□□□□□ -0.72
CD44-209ENST00000433892 CSNK1EP49674 416 aaKnown RBP10.57□□□□□ -0.72
CD44-209ENST00000433892 SORDQ00796 357 aa10.57□□□□□ -0.72
CD44-209ENST00000433892 PMPCAQ10713 525 aa10.57□□□□□ -0.72
CD44-209ENST00000433892 OR7A5Q15622 319 aa10.57□□□□□ -0.72
CD44-209ENST00000433892 HDDC2Q7Z4H3 204 aa10.57□□□□□ -0.72
CD44-209ENST00000433892 ADGRE4PQ86SQ3 457 aa10.57□□□□□ -0.72
CD44-209ENST00000433892 GPAT4Q86UL3 456 aa10.57□□□□□ -0.72
CD44-209ENST00000433892 SLC26A10Q8NG04 563 aa10.57□□□□□ -0.72
CD44-209ENST00000433892 NKD1Q969G9 470 aa10.57□□□□□ -0.72
CD44-209ENST00000433892 REG4Q9BYZ8 158 aa10.57□□□□□ -0.72
CD44-209ENST00000433892 B3GNT4Q9C0J1 378 aa10.57□□□□□ -0.72
CD44-209ENST00000433892 DUSP15Q9H1R2 295 aaPredicted RBP10.57□□□□□ -0.72
CD44-209ENST00000433892 G6PC2Q9NQR9 355 aa10.57□□□□□ -0.72
CD44-209ENST00000433892 CENPMQ9NSP4 180 aa10.57□□□□□ -0.72
CD44-209ENST00000433892 MED29Q9NX70 200 aa10.57□□□□□ -0.72
CD44-209ENST00000433892 FARSAQ9Y285 508 aaKnown RBP10.57□□□□□ -0.72
CD44-209ENST00000433892 CPAMD8Q8IZJ3 1885 aa10.57□□□□□ -0.72
CD44-209ENST00000433892 A0A1B0GX78 115 aa10.56□□□□□ -0.72
CD44-209ENST00000433892 TMEM82A0PJX8 343 aa10.56□□□□□ -0.72
CD44-209ENST00000433892 TMEM235A6NFC5 223 aa10.56□□□□□ -0.72
CD44-209ENST00000433892 NPIPA5E9PKD4 350 aa10.56□□□□□ -0.72
CD44-209ENST00000433892 TEX46H3BTG2 121 aa10.56□□□□□ -0.72
CD44-209ENST00000433892 SMAD9O15198 467 aaKnown RBP10.56□□□□□ -0.72
CD44-209ENST00000433892 ZNF354AO60765 605 aaPredicted RBP10.56□□□□□ -0.72
CD44-209ENST00000433892 SNAPC5O75971 98 aa10.56□□□□□ -0.72
CD44-209ENST00000433892 CYB5AP00167 134 aa10.56□□□□□ -0.72
CD44-209ENST00000433892 CSN2P05814 226 aa10.56□□□□□ -0.72
CD44-209ENST00000433892 GABRA1P14867 456 aa10.56□□□□□ -0.72
CD44-209ENST00000433892 PPP3CBP16298 524 aa10.56□□□□□ -0.72
CD44-209ENST00000433892 ZNF28P17035 718 aa10.56□□□□□ -0.72
CD44-209ENST00000433892 FSTP19883 344 aa10.56□□□□□ -0.72
CD44-209ENST00000433892 ARRB1P49407 418 aaPredicted RBP10.56□□□□□ -0.72
CD44-209ENST00000433892 FBXW4P57775 412 aa10.56□□□□□ -0.72
CD44-209ENST00000433892 GMFBP60983 142 aa10.56□□□□□ -0.72
CD44-209ENST00000433892 SSBP1Q04837 148 aaKnown RBP10.56□□□□□ -0.72
CD44-209ENST00000433892 TOMM20Q15388 145 aa10.56□□□□□ -0.72
CD44-209ENST00000433892 NR0B2Q15466 257 aa10.56□□□□□ -0.72
CD44-209ENST00000433892 B3GNTL1Q67FW5 361 aaPredicted RBP10.56□□□□□ -0.72
CD44-209ENST00000433892 RGS7BPQ6MZT1 257 aaPredicted RBP10.56□□□□□ -0.72
CD44-209ENST00000433892 PLXDC1Q8IUK5 500 aa10.56□□□□□ -0.72
CD44-209ENST00000433892 D2HGDHQ8N465 521 aa10.56□□□□□ -0.72
CD44-209ENST00000433892 TMEM229BQ8NBD8 167 aa10.56□□□□□ -0.72
CD44-209ENST00000433892 GALNT11Q8NCW6 608 aa10.56□□□□□ -0.72
CD44-209ENST00000433892 OR4D6Q8NGJ1 314 aa10.56□□□□□ -0.72
CD44-209ENST00000433892 ST7LQ8TDW4 575 aa10.56□□□□□ -0.72
CD44-209ENST00000433892 POTEKPQ9BYX7 375 aa10.56□□□□□ -0.72
CD44-209ENST00000433892 MED11Q9P086 117 aa10.56□□□□□ -0.72
CD44-209ENST00000433892 SUSD2Q9UGT4 822 aa10.56□□□□□ -0.72
CD44-209ENST00000433892 NPIPA1Q9UND3 350 aa10.56□□□□□ -0.72
CD44-209ENST00000433892 VDAC3Q9Y277 283 aa10.56□□□□□ -0.72
CD44-209ENST00000433892 KCNMB2Q9Y691 235 aa10.56□□□□□ -0.72
CD44-209ENST00000433892 MFSD2BA6NFX1 497 aa10.56□□□□□ -0.72
CD44-209ENST00000433892 OR6C76A6NM76 312 aa10.56□□□□□ -0.72
CD44-209ENST00000433892 SULT1C2O00338 296 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms