RNA–Protein interactions for RNA: ENST00000433822.1

COL17A1-204, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-204ENST00000433822 ITPKBP27987 946 aa6.66□□□□□ -1.34
COL17A1-204ENST00000433822 GRPRP30550 384 aa6.66□□□□□ -1.34
COL17A1-204ENST00000433822 RIDAP52758 137 aaKnown RBP6.66□□□□□ -1.34
COL17A1-204ENST00000433822 EFNA3P52797 238 aa6.66□□□□□ -1.34
COL17A1-204ENST00000433822 GNG2P59768 71 aa6.66□□□□□ -1.34
COL17A1-204ENST00000433822 DHODHQ02127 395 aa6.66□□□□□ -1.34
COL17A1-204ENST00000433822 PUDPQ08623 228 aa6.66□□□□□ -1.34
COL17A1-204ENST00000433822 SRSF5Q13243 272 aaKnown RBP6.66□□□□□ -1.34
COL17A1-204ENST00000433822 KCNAB1Q14722 419 aa6.66□□□□□ -1.34
COL17A1-204ENST00000433822 UBXN2BQ14CS0 331 aa6.66□□□□□ -1.34
COL17A1-204ENST00000433822 WDR38Q5JTN6 314 aa6.66□□□□□ -1.34
COL17A1-204ENST00000433822 TMEM69Q5SWH9 247 aa6.66□□□□□ -1.34
COL17A1-204ENST00000433822 BCL2L15Q5TBC7 163 aa6.66□□□□□ -1.34
COL17A1-204ENST00000433822 LAMTOR1Q6IAA8 161 aa6.66□□□□□ -1.34
COL17A1-204ENST00000433822 ZNF704Q6ZNC4 412 aaPredicted RBP6.66□□□□□ -1.34
COL17A1-204ENST00000433822 FCRLAQ7L513 359 aa6.66□□□□□ -1.34
COL17A1-204ENST00000433822 DPY19L4Q7Z388 723 aa6.66□□□□□ -1.34
COL17A1-204ENST00000433822 MARCH3Q86UD3 253 aa6.66□□□□□ -1.34
COL17A1-204ENST00000433822 CATSPERDQ86XM0 798 aa6.66□□□□□ -1.34
COL17A1-204ENST00000433822 UBE2J2Q8N2K1 259 aa6.66□□□□□ -1.34
COL17A1-204ENST00000433822 SLC25A45Q8N413 288 aa6.66□□□□□ -1.34
COL17A1-204ENST00000433822 C9orf62Q8N4C0 152 aa6.66□□□□□ -1.34
COL17A1-204ENST00000433822 METTL27Q8N6F8 245 aaPredicted RBP6.66□□□□□ -1.34
COL17A1-204ENST00000433822 ZNF676Q8N7Q3 588 aa6.66□□□□□ -1.34
COL17A1-204ENST00000433822 Q8N9G6 341 aaPredicted RBP6.66□□□□□ -1.34
COL17A1-204ENST00000433822 OR52N5Q8NH56 324 aa6.66□□□□□ -1.34
COL17A1-204ENST00000433822 SYNPRQ8TBG9 265 aa6.66□□□□□ -1.34
COL17A1-204ENST00000433822 STT3BQ8TCJ2 826 aa6.66□□□□□ -1.34
COL17A1-204ENST00000433822 SMAP2Q8WU79 429 aaPredicted RBP6.66□□□□□ -1.34
COL17A1-204ENST00000433822 SLC25A43Q8WUT9 341 aaPredicted RBP6.66□□□□□ -1.34
COL17A1-204ENST00000433822 ZDHHC19Q8WVZ1 309 aaPredicted RBP6.66□□□□□ -1.34
COL17A1-204ENST00000433822 NAT6Q93015 286 aa6.66□□□□□ -1.34
COL17A1-204ENST00000433822 TMEM106AQ96A25 262 aa6.66□□□□□ -1.34
COL17A1-204ENST00000433822 ZNF524Q96C55 264 aa6.66□□□□□ -1.34
COL17A1-204ENST00000433822 C8orf44Q96CB5 159 aa6.66□□□□□ -1.34
COL17A1-204ENST00000433822 FOXRED1Q96CU9 486 aaPredicted RBP6.66□□□□□ -1.34
COL17A1-204ENST00000433822 MRGPRX4Q96LA9 322 aa6.66□□□□□ -1.34
COL17A1-204ENST00000433822 ELF4Q99607 663 aaPredicted RBP6.66□□□□□ -1.34
COL17A1-204ENST00000433822 NUDT16L1Q9BRJ7 211 aaKnown RBP6.66□□□□□ -1.34
COL17A1-204ENST00000433822 RTN4RQ9BZR6 473 aa6.66□□□□□ -1.34
COL17A1-204ENST00000433822 ALX4Q9H161 411 aaPredicted RBP6.66□□□□□ -1.34
COL17A1-204ENST00000433822 C20orf85Q9H1P6 137 aa6.66□□□□□ -1.34
COL17A1-204ENST00000433822 GPN1Q9HCN4 374 aaPredicted RBP6.66□□□□□ -1.34
COL17A1-204ENST00000433822 GALNT9Q9HCQ5 603 aa6.66□□□□□ -1.34
COL17A1-204ENST00000433822 MYOZ1Q9NP98 299 aaPredicted RBP6.66□□□□□ -1.34
COL17A1-204ENST00000433822 SDHAF3Q9NRP4 125 aa6.66□□□□□ -1.34
COL17A1-204ENST00000433822 ALKBH4Q9NXW9 302 aa6.66□□□□□ -1.34
COL17A1-204ENST00000433822 B3GNT2Q9NY97 397 aa6.66□□□□□ -1.34
COL17A1-204ENST00000433822 C19orf25Q9UFG5 118 aaPredicted RBP6.66□□□□□ -1.34
COL17A1-204ENST00000433822 SUSD2Q9UGT4 822 aa6.66□□□□□ -1.34
COL17A1-204ENST00000433822 NXT1Q9UKK6 140 aaKnown RBP6.66□□□□□ -1.34
COL17A1-204ENST00000433822 IKZF2Q9UKS7 526 aa6.66□□□□□ -1.34
COL17A1-204ENST00000433822 SDK1Q7Z5N4 2213 aa6.66□□□□□ -1.34
COL17A1-204ENST00000433822 KNL1Q8NG31 2342 aa6.66□□□□□ -1.34
COL17A1-204ENST00000433822 LAMA5O15230 3695 aa6.65□□□□□ -1.34
COL17A1-204ENST00000433822 A0A1B0GVT2 93 aa6.65□□□□□ -1.34
COL17A1-204ENST00000433822 OR2W5A6NFC9 320 aa6.65□□□□□ -1.34
COL17A1-204ENST00000433822 GGT3PA6NGU5 568 aa6.65□□□□□ -1.34
COL17A1-204ENST00000433822 A8MUA0 341 aa6.65□□□□□ -1.34
COL17A1-204ENST00000433822 A8MV72 311 aaPredicted RBP6.65□□□□□ -1.34
COL17A1-204ENST00000433822 IDSB3KWA1 339 aa6.65□□□□□ -1.34
COL17A1-204ENST00000433822 ICMTO60725 284 aa6.65□□□□□ -1.34
COL17A1-204ENST00000433822 ALOX12BO75342 701 aa6.65□□□□□ -1.34
COL17A1-204ENST00000433822 KHDRBS3O75525 346 aaKnown RBP6.65□□□□□ -1.34
COL17A1-204ENST00000433822 NDUFB6O95139 128 aa6.65□□□□□ -1.34
COL17A1-204ENST00000433822 TPOP07202 933 aa6.65□□□□□ -1.34
COL17A1-204ENST00000433822 CSF1P09603 554 aa6.65□□□□□ -1.34
COL17A1-204ENST00000433822 UBCP0CG48 685 aaKnown RBP6.65□□□□□ -1.34
COL17A1-204ENST00000433822 NR2C1P13056 603 aa6.65□□□□□ -1.34
COL17A1-204ENST00000433822 GABRA1P14867 456 aa6.65□□□□□ -1.34
COL17A1-204ENST00000433822 CDK2P24941 298 aa6.65□□□□□ -1.34
COL17A1-204ENST00000433822 EPHA8P29322 1005 aaPredicted RBP6.65□□□□□ -1.34
COL17A1-204ENST00000433822 KIR3DL2P43630 455 aa6.65□□□□□ -1.34
COL17A1-204ENST00000433822 CXCL12P48061 93 aa6.65□□□□□ -1.34
COL17A1-204ENST00000433822 SRP9P49458 86 aaKnown RBP6.65□□□□□ -1.34
COL17A1-204ENST00000433822 TAS2R20P59543 309 aa6.65□□□□□ -1.34
COL17A1-204ENST00000433822 ACTBP60709 375 aa6.65□□□□□ -1.34
COL17A1-204ENST00000433822 ACTG1P63261 375 aa6.65□□□□□ -1.34
COL17A1-204ENST00000433822 SNTA1Q13424 505 aa6.65□□□□□ -1.34
COL17A1-204ENST00000433822 ZMYND11Q15326 602 aa6.65□□□□□ -1.34
COL17A1-204ENST00000433822 RBMS2Q15434 407 aaKnown RBP6.65□□□□□ -1.34
COL17A1-204ENST00000433822 NR0B2Q15466 257 aa6.65□□□□□ -1.34
COL17A1-204ENST00000433822 FCN2Q15485 313 aa6.65□□□□□ -1.34
COL17A1-204ENST00000433822 MPPED2Q15777 294 aa6.65□□□□□ -1.34
COL17A1-204ENST00000433822 GXYLT1Q4G148 440 aa6.65□□□□□ -1.34
COL17A1-204ENST00000433822 NKAIN1Q4KMZ8 207 aa6.65□□□□□ -1.34
COL17A1-204ENST00000433822 Q5BKY6 102 aa6.65□□□□□ -1.34
COL17A1-204ENST00000433822 VWA2Q5GFL6 755 aa6.65□□□□□ -1.34
COL17A1-204ENST00000433822 C1orf100Q5SVJ3 147 aa6.65□□□□□ -1.34
COL17A1-204ENST00000433822 TMEM244Q5VVB8 128 aa6.65□□□□□ -1.34
COL17A1-204ENST00000433822 NKAIN2Q5VXU1 208 aa6.65□□□□□ -1.34
COL17A1-204ENST00000433822 GLT8D1Q68CQ7 371 aa6.65□□□□□ -1.34
COL17A1-204ENST00000433822 TMEM205Q6UW68 189 aa6.65□□□□□ -1.34
COL17A1-204ENST00000433822 H1FNTQ75WM6 255 aaPredicted RBP6.65□□□□□ -1.34
COL17A1-204ENST00000433822 ANKRD37Q7Z713 158 aa6.65□□□□□ -1.34
COL17A1-204ENST00000433822 GLCCI1Q86VQ1 547 aa6.65□□□□□ -1.34
COL17A1-204ENST00000433822 TMPRSS12Q86WS5 348 aa6.65□□□□□ -1.34
COL17A1-204ENST00000433822 GLB1L2Q8IW92 636 aa6.65□□□□□ -1.34
COL17A1-204ENST00000433822 PM20D2Q8IYS1 436 aa6.65□□□□□ -1.34
COL17A1-204ENST00000433822 PRSS35Q8N3Z0 413 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms