RNA–Protein interactions for RNA: ENST00000433762.1

COL6A3-207, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL6A3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-207ENST00000433762 SLCO1B1Q9Y6L6 691 aa12.26□□□□□ -0.45
COL6A3-207ENST00000433762 PCDH15Q96QU1 1955 aa12.26□□□□□ -0.45
COL6A3-207ENST00000433762 A0A1B0GX78 115 aa12.26□□□□□ -0.45
COL6A3-207ENST00000433762 TMEM82A0PJX8 343 aa12.26□□□□□ -0.45
COL6A3-207ENST00000433762 C2CD4DB7Z1M9 353 aa12.26□□□□□ -0.45
COL6A3-207ENST00000433762 ETV2O00321 342 aaPredicted RBP12.26□□□□□ -0.45
COL6A3-207ENST00000433762 ADAM10O14672 748 aa12.26□□□□□ -0.45
COL6A3-207ENST00000433762 ZNF208O43345 1280 aa12.26□□□□□ -0.45
COL6A3-207ENST00000433762 ZNF35P13682 527 aa12.26□□□□□ -0.45
COL6A3-207ENST00000433762 ZNF250P15622 560 aa12.26□□□□□ -0.45
COL6A3-207ENST00000433762 NAGAP17050 411 aa12.26□□□□□ -0.45
COL6A3-207ENST00000433762 APOBEC1P41238 236 aaKnown RBP12.26□□□□□ -0.45
COL6A3-207ENST00000433762 RPS27P42677 84 aaKnown RBP12.26□□□□□ -0.45
COL6A3-207ENST00000433762 OR1D4P47884 311 aa12.26□□□□□ -0.45
COL6A3-207ENST00000433762 MMP16P51512 607 aa12.26□□□□□ -0.45
COL6A3-207ENST00000433762 MFGE8Q08431 387 aaPredicted RBP12.26□□□□□ -0.45
COL6A3-207ENST00000433762 ZNF345Q14585 488 aa12.26□□□□□ -0.45
COL6A3-207ENST00000433762 NSDHLQ15738 373 aa12.26□□□□□ -0.45
COL6A3-207ENST00000433762 KIF26BQ2KJY2 2108 aa12.26□□□□□ -0.45
COL6A3-207ENST00000433762 NHLRC1Q6VVB1 395 aa12.26□□□□□ -0.45
COL6A3-207ENST00000433762 SLC35D2Q76EJ3 337 aa12.26□□□□□ -0.45
COL6A3-207ENST00000433762 OR4D10Q8NGI6 311 aa12.26□□□□□ -0.45
COL6A3-207ENST00000433762 OR52B4Q8NGK2 314 aa12.26□□□□□ -0.45
COL6A3-207ENST00000433762 SLC25A36Q96CQ1 311 aa12.26□□□□□ -0.45
COL6A3-207ENST00000433762 TGIF2Q9GZN2 237 aa12.26□□□□□ -0.45
COL6A3-207ENST00000433762 G6PC2Q9NQR9 355 aa12.26□□□□□ -0.45
COL6A3-207ENST00000433762 ZNF224Q9NZL3 707 aa12.26□□□□□ -0.45
COL6A3-207ENST00000433762 PFDN2Q9UHV9 154 aa12.26□□□□□ -0.45
COL6A3-207ENST00000433762 PLEKHA6Q9Y2H5 1048 aa12.26□□□□□ -0.45
COL6A3-207ENST00000433762 A0A0D9SG52 128 aa12.25□□□□□ -0.45
COL6A3-207ENST00000433762 A0A1B0GTI1 187 aa12.25□□□□□ -0.45
COL6A3-207ENST00000433762 A8MXK9 166 aa12.25□□□□□ -0.45
COL6A3-207ENST00000433762 SOX1O00570 391 aaPredicted RBP12.25□□□□□ -0.45
COL6A3-207ENST00000433762 GOSR2O14653 212 aa12.25□□□□□ -0.45
COL6A3-207ENST00000433762 PRKNO60260 465 aaPredicted RBP12.25□□□□□ -0.45
COL6A3-207ENST00000433762 CYB5AP00167 134 aa12.25□□□□□ -0.45
COL6A3-207ENST00000433762 ZNF823P16415 610 aa12.25□□□□□ -0.45
COL6A3-207ENST00000433762 TBPP20226 339 aa12.25□□□□□ -0.45
COL6A3-207ENST00000433762 CD96P40200 585 aa12.25□□□□□ -0.45
COL6A3-207ENST00000433762 DNASE1L1P49184 302 aa12.25□□□□□ -0.45
COL6A3-207ENST00000433762 ARL4DP49703 201 aa12.25□□□□□ -0.45
COL6A3-207ENST00000433762 GUCA2AQ02747 115 aa12.25□□□□□ -0.45
COL6A3-207ENST00000433762 ZP2Q05996 745 aa12.25□□□□□ -0.45
COL6A3-207ENST00000433762 FAHD2BQ6P2I3 314 aaPredicted RBP12.25□□□□□ -0.45
COL6A3-207ENST00000433762 C12orf45Q8N5I9 185 aaPredicted RBP12.25□□□□□ -0.45
COL6A3-207ENST00000433762 ST7LQ8TDW4 575 aa12.25□□□□□ -0.45
COL6A3-207ENST00000433762 FAHD2AQ96GK7 314 aa12.25□□□□□ -0.45
COL6A3-207ENST00000433762 TAS2R4Q9NYW5 299 aa12.25□□□□□ -0.45
COL6A3-207ENST00000433762 RAB22AQ9UL26 194 aa12.25□□□□□ -0.45
COL6A3-207ENST00000433762 ADAMTS20P59510 1910 aa12.25□□□□□ -0.45
COL6A3-207ENST00000433762 METTL21EPA6NDL7 271 aa12.25□□□□□ -0.45
COL6A3-207ENST00000433762 ARPC5O15511 151 aa12.25□□□□□ -0.45
COL6A3-207ENST00000433762 GPANK1O95872 356 aa12.25□□□□□ -0.45
COL6A3-207ENST00000433762 OR4E1P0C645 316 aa12.25□□□□□ -0.45
COL6A3-207ENST00000433762 UBBP0CG47 229 aa12.25□□□□□ -0.45
COL6A3-207ENST00000433762 SDHBP21912 280 aa12.25□□□□□ -0.45
COL6A3-207ENST00000433762 HSD11B1P28845 292 aa12.25□□□□□ -0.45
COL6A3-207ENST00000433762 RPS27AP62979 156 aaKnown RBP12.25□□□□□ -0.45
COL6A3-207ENST00000433762 UBA52P62987 128 aaKnown RBP12.25□□□□□ -0.45
COL6A3-207ENST00000433762 GLYATL3Q5SZD4 288 aa12.25□□□□□ -0.45
COL6A3-207ENST00000433762 OR7E24Q6IFN5 339 aa12.25□□□□□ -0.45
COL6A3-207ENST00000433762 Q6ZS52 159 aa12.25□□□□□ -0.45
COL6A3-207ENST00000433762 OR5M9Q8NGP3 310 aa12.25□□□□□ -0.45
COL6A3-207ENST00000433762 OR13C3Q8NGS6 347 aa12.25□□□□□ -0.45
COL6A3-207ENST00000433762 OR1L3Q8NH93 324 aa12.25□□□□□ -0.45
COL6A3-207ENST00000433762 RNF138Q8WVD3 245 aa12.25□□□□□ -0.45
COL6A3-207ENST00000433762 PRRT1Q99946 306 aa12.25□□□□□ -0.45
COL6A3-207ENST00000433762 UQCC2Q9BRT2 126 aa12.25□□□□□ -0.45
COL6A3-207ENST00000433762 SLC25A32Q9H2D1 315 aa12.25□□□□□ -0.45
COL6A3-207ENST00000433762 OR52A1Q9UKL2 312 aa12.25□□□□□ -0.45
COL6A3-207ENST00000433762 RHBDD3Q9Y3P4 386 aa12.25□□□□□ -0.45
COL6A3-207ENST00000433762 IGHV1OR21-1A0A087WYE8 117 aa12.24□□□□□ -0.45
COL6A3-207ENST00000433762 DISC1C4P0D8 188 aa12.24□□□□□ -0.45
COL6A3-207ENST00000433762 DUX1O43812 170 aa12.24□□□□□ -0.45
COL6A3-207ENST00000433762 ZNF735P0CB33 412 aa12.24□□□□□ -0.45
COL6A3-207ENST00000433762 SLC25A4P12235 298 aa12.24□□□□□ -0.45
COL6A3-207ENST00000433762 MAOBP27338 520 aa12.24□□□□□ -0.45
COL6A3-207ENST00000433762 MPGP29372 298 aa12.24□□□□□ -0.45
COL6A3-207ENST00000433762 C17orf67Q0P5P2 114 aa12.24□□□□□ -0.45
COL6A3-207ENST00000433762 C4orf46Q504U0 113 aa12.24□□□□□ -0.45
COL6A3-207ENST00000433762 H1FNTQ75WM6 255 aaPredicted RBP12.24□□□□□ -0.45
COL6A3-207ENST00000433762 RHOUQ7L0Q8 258 aa12.24□□□□□ -0.45
COL6A3-207ENST00000433762 CHMP1BQ7LBR1 199 aa12.24□□□□□ -0.45
COL6A3-207ENST00000433762 ZDHHC22Q8N966 263 aa12.24□□□□□ -0.45
COL6A3-207ENST00000433762 PLPP7Q8NBV4 271 aa12.24□□□□□ -0.45
COL6A3-207ENST00000433762 ADPRHL1Q8NDY3 354 aa12.24□□□□□ -0.45
COL6A3-207ENST00000433762 RNF133Q8WVZ7 376 aa12.24□□□□□ -0.45
COL6A3-207ENST00000433762 AQP3Q92482 292 aa12.24□□□□□ -0.45
COL6A3-207ENST00000433762 KCNK17Q96T54 332 aa12.24□□□□□ -0.45
COL6A3-207ENST00000433762 VN1R1Q9GZP7 353 aa12.24□□□□□ -0.45
COL6A3-207ENST00000433762 ARL6Q9H0F7 186 aa12.24□□□□□ -0.45
COL6A3-207ENST00000433762 DNTTIP1Q9H147 329 aa12.24□□□□□ -0.45
COL6A3-207ENST00000433762 TMEM138Q9NPI0 162 aa12.24□□□□□ -0.45
COL6A3-207ENST00000433762 KLHL13Q9P2N7 655 aa12.24□□□□□ -0.45
COL6A3-207ENST00000433762 KCNMB2Q9Y691 235 aa12.24□□□□□ -0.45
COL6A3-207ENST00000433762 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.23□□□□□ -0.45
COL6A3-207ENST00000433762 LOC107986453A0A1B0GWG9 222 aa12.23□□□□□ -0.45
COL6A3-207ENST00000433762 ZNF736B4DX44 427 aaPredicted RBP12.23□□□□□ -0.45
COL6A3-207ENST00000433762 PLGP00747 810 aaPredicted RBP12.23□□□□□ -0.45
COL6A3-207ENST00000433762 MGMTP16455 207 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms