RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 C15orf54Q8N8G6 183 aa10.42□□□□□ -0.74
HMGCS1-202ENST00000433297 SLC25A44Q96H78 314 aaPredicted RBP10.42□□□□□ -0.74
HMGCS1-202ENST00000433297 DCBLD2Q96PD2 775 aa10.42□□□□□ -0.74
HMGCS1-202ENST00000433297 MOGAT1Q96PD6 335 aa10.42□□□□□ -0.74
HMGCS1-202ENST00000433297 PRRT1Q99946 306 aa10.42□□□□□ -0.74
HMGCS1-202ENST00000433297 METTL8Q9H825 291 aaKnown RBP10.42□□□□□ -0.74
HMGCS1-202ENST00000433297 FN3KRPQ9HA64 309 aa10.42□□□□□ -0.74
HMGCS1-202ENST00000433297 FBXL21Q9UKT6 434 aa10.42□□□□□ -0.74
HMGCS1-202ENST00000433297 C11orf98E9PRG8 122 aa10.42□□□□□ -0.74
HMGCS1-202ENST00000433297 H0YIZ8 118 aa10.42□□□□□ -0.74
HMGCS1-202ENST00000433297 ZNF432O94892 652 aa10.42□□□□□ -0.74
HMGCS1-202ENST00000433297 MDGA2Q7Z553 956 aa10.42□□□□□ -0.74
HMGCS1-202ENST00000433297 ZNF595Q8IYB9 648 aa10.42□□□□□ -0.74
HMGCS1-202ENST00000433297 FRMD1Q8N878 549 aa10.42□□□□□ -0.74
HMGCS1-202ENST00000433297 ZNF563Q8TA94 476 aa10.42□□□□□ -0.74
HMGCS1-202ENST00000433297 MCHR2Q969V1 340 aa10.42□□□□□ -0.74
HMGCS1-202ENST00000433297 KIRREL1Q96J84 757 aa10.42□□□□□ -0.74
HMGCS1-202ENST00000433297 TCEAL7Q9BRU2 100 aa10.42□□□□□ -0.74
HMGCS1-202ENST00000433297 ZNF426Q9BUY5 554 aa10.42□□□□□ -0.74
HMGCS1-202ENST00000433297 RNF126Q9BV68 326 aa10.42□□□□□ -0.74
HMGCS1-202ENST00000433297 TRPM6Q9BX84 2022 aa10.42□□□□□ -0.74
HMGCS1-202ENST00000433297 SMIM3Q9BZL3 60 aa10.42□□□□□ -0.74
HMGCS1-202ENST00000433297 CYTL1Q9NRR1 136 aa10.42□□□□□ -0.74
HMGCS1-202ENST00000433297 STARD5Q9NSY2 213 aa10.42□□□□□ -0.74
HMGCS1-202ENST00000433297 TMEM100Q9NV29 134 aa10.42□□□□□ -0.74
HMGCS1-202ENST00000433297 OR5AC2Q9NZP5 309 aa10.42□□□□□ -0.74
HMGCS1-202ENST00000433297 INSL6Q9Y581 213 aa10.42□□□□□ -0.74
HMGCS1-202ENST00000433297 TEX13DA0A0J9YY54 714 aaPredicted RBP10.41□□□□□ -0.74
HMGCS1-202ENST00000433297 ARPC3O15145 178 aa10.41□□□□□ -0.74
HMGCS1-202ENST00000433297 OR6A2O95222 327 aa10.41□□□□□ -0.74
HMGCS1-202ENST00000433297 ABHD16AO95870 558 aa10.41□□□□□ -0.74
HMGCS1-202ENST00000433297 IGKV1D-16P01601 117 aa10.41□□□□□ -0.74
HMGCS1-202ENST00000433297 CD14P08571 375 aa10.41□□□□□ -0.74
HMGCS1-202ENST00000433297 SPARCP09486 303 aa10.41□□□□□ -0.74
HMGCS1-202ENST00000433297 RNF224P0DH78 156 aa10.41□□□□□ -0.74
HMGCS1-202ENST00000433297 DNASE1L1P49184 302 aa10.41□□□□□ -0.74
HMGCS1-202ENST00000433297 RAB2AP61019 212 aa10.41□□□□□ -0.74
HMGCS1-202ENST00000433297 RASGEF1BQ0VAM2 473 aa10.41□□□□□ -0.74
HMGCS1-202ENST00000433297 ENPP2Q13822 863 aa10.41□□□□□ -0.74
HMGCS1-202ENST00000433297 ELAVL3Q14576 367 aaKnown RBP10.41□□□□□ -0.74
HMGCS1-202ENST00000433297 RPL7L1Q6DKI1 246 aaKnown RBP10.41□□□□□ -0.74
HMGCS1-202ENST00000433297 DGAT2L6Q6ZPD8 337 aa10.41□□□□□ -0.74
HMGCS1-202ENST00000433297 PPP1R3BQ86XI6 285 aa10.41□□□□□ -0.74
HMGCS1-202ENST00000433297 FAM174AQ8TBP5 190 aa10.41□□□□□ -0.74
HMGCS1-202ENST00000433297 RPS4Y2Q8TD47 263 aa10.41□□□□□ -0.74
HMGCS1-202ENST00000433297 C4orf45Q96LM5 186 aa10.41□□□□□ -0.74
HMGCS1-202ENST00000433297 RGCCQ9H4X1 137 aa10.41□□□□□ -0.74
HMGCS1-202ENST00000433297 WBP1LQ9NX94 342 aa10.41□□□□□ -0.74
HMGCS1-202ENST00000433297 YBX2Q9Y2T7 364 aaKnown RBP10.41□□□□□ -0.74
HMGCS1-202ENST00000433297 SCN5AQ14524 2016 aa10.41□□□□□ -0.74
HMGCS1-202ENST00000433297 WRBO00258 174 aa10.41□□□□□ -0.74
HMGCS1-202ENST00000433297 MBTPS2O43462 519 aa10.41□□□□□ -0.74
HMGCS1-202ENST00000433297 PNPP00491 289 aa10.41□□□□□ -0.74
HMGCS1-202ENST00000433297 INHAP05111 366 aa10.41□□□□□ -0.74
HMGCS1-202ENST00000433297 PPICP45877 212 aa10.41□□□□□ -0.74
HMGCS1-202ENST00000433297 PRPS1P60891 318 aa10.41□□□□□ -0.74
HMGCS1-202ENST00000433297 DEFA6Q01524 100 aa10.41□□□□□ -0.74
HMGCS1-202ENST00000433297 GPR18Q14330 331 aa10.41□□□□□ -0.74
HMGCS1-202ENST00000433297 PAQR4Q8N4S7 273 aaPredicted RBP10.41□□□□□ -0.74
HMGCS1-202ENST00000433297 INTS14Q96SY0 518 aa10.41□□□□□ -0.74
HMGCS1-202ENST00000433297 LRIT1Q9P2V4 623 aa10.41□□□□□ -0.74
HMGCS1-202ENST00000433297 GATCO43716 136 aaKnown RBP10.41□□□□□ -0.74
HMGCS1-202ENST00000433297 KLK3P07288 261 aaPredicted RBP10.41□□□□□ -0.74
HMGCS1-202ENST00000433297 ADH5P11766 374 aa10.41□□□□□ -0.74
HMGCS1-202ENST00000433297 ALOX5APP20292 161 aa10.41□□□□□ -0.74
HMGCS1-202ENST00000433297 EIF2S3P41091 472 aaKnown RBP10.41□□□□□ -0.74
HMGCS1-202ENST00000433297 TSFMP43897 325 aaKnown RBP10.41□□□□□ -0.74
HMGCS1-202ENST00000433297 HTRA3P83110 453 aa10.41□□□□□ -0.74
HMGCS1-202ENST00000433297 ZNHIT3Q15649 155 aaPredicted RBP10.41□□□□□ -0.74
HMGCS1-202ENST00000433297 HNRNPA1L2Q32P51 320 aaKnown RBP10.41□□□□□ -0.74
HMGCS1-202ENST00000433297 TMEM225Q6GV28 225 aa10.41□□□□□ -0.74
HMGCS1-202ENST00000433297 FBXO42Q6P3S6 717 aa10.41□□□□□ -0.74
HMGCS1-202ENST00000433297 ADAMTSL4Q6UY14 1074 aa10.41□□□□□ -0.74
HMGCS1-202ENST00000433297 MARCH3Q86UD3 253 aa10.41□□□□□ -0.74
HMGCS1-202ENST00000433297 CDC20BQ86Y33 519 aa10.41□□□□□ -0.74
HMGCS1-202ENST00000433297 OR51F2Q8NH61 342 aa10.41□□□□□ -0.74
HMGCS1-202ENST00000433297 CD99L2Q8TCZ2 262 aa10.41□□□□□ -0.74
HMGCS1-202ENST00000433297 CD300LFQ8TDQ1 290 aa10.41□□□□□ -0.74
HMGCS1-202ENST00000433297 LRFN5Q96NI6 719 aa10.41□□□□□ -0.74
HMGCS1-202ENST00000433297 PMS2P1A4D2B8 440 aa10.4□□□□□ -0.74
HMGCS1-202ENST00000433297 F8VVB4 439 aa10.4□□□□□ -0.74
HMGCS1-202ENST00000433297 F8VWA3 439 aa10.4□□□□□ -0.74
HMGCS1-202ENST00000433297 SOX1O00570 391 aaPredicted RBP10.4□□□□□ -0.74
HMGCS1-202ENST00000433297 RDH16O75452 317 aa10.4□□□□□ -0.74
HMGCS1-202ENST00000433297 YIF1AO95070 293 aa10.4□□□□□ -0.74
HMGCS1-202ENST00000433297 AWAT1Q58HT5 328 aa10.4□□□□□ -0.74
HMGCS1-202ENST00000433297 ZNF550Q7Z398 422 aa10.4□□□□□ -0.74
HMGCS1-202ENST00000433297 TMEM151BQ8IW70 566 aa10.4□□□□□ -0.74
HMGCS1-202ENST00000433297 OR4C3Q8NH37 302 aa10.4□□□□□ -0.74
HMGCS1-202ENST00000433297 SUSD6Q92537 303 aa10.4□□□□□ -0.74
HMGCS1-202ENST00000433297 RHOVQ96L33 236 aa10.4□□□□□ -0.74
HMGCS1-202ENST00000433297 SERINC2Q96SA4 455 aa10.4□□□□□ -0.74
HMGCS1-202ENST00000433297 RAB11FIP5Q9BXF6 653 aa10.4□□□□□ -0.74
HMGCS1-202ENST00000433297 EIF5A2Q9GZV4 153 aaKnown RBP10.4□□□□□ -0.74
HMGCS1-202ENST00000433297 TAF9BQ9HBM6 251 aa10.4□□□□□ -0.74
HMGCS1-202ENST00000433297 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.4□□□□□ -0.74
HMGCS1-202ENST00000433297 B9D1Q9UPM9 204 aa10.4□□□□□ -0.74
HMGCS1-202ENST00000433297 A0A087WUJ7 227 aa10.4□□□□□ -0.74
HMGCS1-202ENST00000433297 C7orf77A4D0Y5 90 aa10.4□□□□□ -0.74
HMGCS1-202ENST00000433297 EFSO43281 561 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms