RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 ITLN1Q8WWA0 313 aa13.93□□□□□ -0.18
VARS-216ENST00000428445 SLC7A6Q92536 515 aa13.93□□□□□ -0.18
VARS-216ENST00000428445 RBP7Q96R05 134 aa13.93□□□□□ -0.18
VARS-216ENST00000428445 DIRC2Q96SL1 478 aa13.93□□□□□ -0.18
VARS-216ENST00000428445 PATZ1Q9HBE1 687 aaKnown RBP13.93□□□□□ -0.18
VARS-216ENST00000428445 TUBG2Q9NRH3 451 aa13.93□□□□□ -0.18
VARS-216ENST00000428445 RHCGQ9UBD6 479 aa13.93□□□□□ -0.18
VARS-216ENST00000428445 ZDHHC8Q9ULC8 765 aa13.93□□□□□ -0.18
VARS-216ENST00000428445 ICMTO60725 284 aa13.92□□□□□ -0.18
VARS-216ENST00000428445 ZNF12P17014 697 aa13.92□□□□□ -0.18
VARS-216ENST00000428445 PCBD1P61457 104 aa13.92□□□□□ -0.18
VARS-216ENST00000428445 FHL1Q13642 323 aa13.92□□□□□ -0.18
VARS-216ENST00000428445 ZMYND11Q15326 602 aa13.92□□□□□ -0.18
VARS-216ENST00000428445 C1orf94Q6P1W5 598 aa13.92□□□□□ -0.18
VARS-216ENST00000428445 SHISA2Q6UWI4 295 aa13.92□□□□□ -0.18
VARS-216ENST00000428445 LRRC28Q86X40 367 aaPredicted RBP13.92□□□□□ -0.18
VARS-216ENST00000428445 POP5Q969H6 163 aaKnown RBP13.92□□□□□ -0.18
VARS-216ENST00000428445 CMBLQ96DG6 245 aa13.92□□□□□ -0.18
VARS-216ENST00000428445 BPIFA2Q96DR5 249 aa13.92□□□□□ -0.18
VARS-216ENST00000428445 TPD52L3Q96J77 140 aa13.92□□□□□ -0.18
VARS-216ENST00000428445 SIGLEC11Q96RL6 698 aa13.92□□□□□ -0.18
VARS-216ENST00000428445 ALG12Q9BV10 488 aa13.92□□□□□ -0.18
VARS-216ENST00000428445 VIPAS39Q9H9C1 493 aa13.92□□□□□ -0.18
VARS-216ENST00000428445 UNKLQ9H9P5 680 aaKnown RBP13.92□□□□□ -0.18
VARS-216ENST00000428445 GMPR2Q9P2T1 348 aaKnown RBP13.92□□□□□ -0.18
VARS-216ENST00000428445 A4GNTQ9UNA3 340 aa13.92□□□□□ -0.18
VARS-216ENST00000428445 HIF3AQ9Y2N7 669 aa13.92□□□□□ -0.18
VARS-216ENST00000428445 STARD10Q9Y365 291 aa13.92□□□□□ -0.18
VARS-216ENST00000428445 INSIG2Q9Y5U4 225 aa13.92□□□□□ -0.18
VARS-216ENST00000428445 IGHV3-64DA0A0J9YX35 117 aa13.91□□□□□ -0.18
VARS-216ENST00000428445 BBIP1A8MTZ0 92 aa13.91□□□□□ -0.18
VARS-216ENST00000428445 J3KTA2 159 aa13.91□□□□□ -0.18
VARS-216ENST00000428445 ABHD16AO95870 558 aa13.91□□□□□ -0.18
VARS-216ENST00000428445 GPANK1O95872 356 aa13.91□□□□□ -0.18
VARS-216ENST00000428445 IGHMP01871 453 aa13.91□□□□□ -0.18
VARS-216ENST00000428445 IGHV4-38-2P0DP08 117 aa13.91□□□□□ -0.18
VARS-216ENST00000428445 ARHGDIAP52565 204 aa13.91□□□□□ -0.18
VARS-216ENST00000428445 ST3GAL3Q11203 375 aa13.91□□□□□ -0.18
VARS-216ENST00000428445 FAM205BPQ63HN1 556 aa13.91□□□□□ -0.18
VARS-216ENST00000428445 ARL9Q6T311 187 aa13.91□□□□□ -0.18
VARS-216ENST00000428445 FOXL2NBQ6ZUU3 175 aa13.91□□□□□ -0.18
VARS-216ENST00000428445 SYT9Q86SS6 491 aa13.91□□□□□ -0.18
VARS-216ENST00000428445 OR5AS1Q8N127 324 aa13.91□□□□□ -0.18
VARS-216ENST00000428445 KLHL36Q8N4N3 616 aa13.91□□□□□ -0.18
VARS-216ENST00000428445 ZNF283Q8N7M2 679 aa13.91□□□□□ -0.18
VARS-216ENST00000428445 ZNF420Q8TAQ5 688 aaPredicted RBP13.91□□□□□ -0.18
VARS-216ENST00000428445 ZNF583Q96ND8 569 aa13.91□□□□□ -0.18
VARS-216ENST00000428445 ZNF696Q9H7X3 374 aa13.91□□□□□ -0.18
VARS-216ENST00000428445 ELOVL3Q9HB03 270 aa13.91□□□□□ -0.18
VARS-216ENST00000428445 GID8Q9NWU2 228 aa13.91□□□□□ -0.18
VARS-216ENST00000428445 PLEK2Q9NYT0 353 aa13.91□□□□□ -0.18
VARS-216ENST00000428445 SNX13Q9Y5W8 968 aa13.91□□□□□ -0.18
VARS-216ENST00000428445 PPIAL4EA0A075B759 164 aa13.9□□□□□ -0.18
VARS-216ENST00000428445 PPIAL4CA0A0B4J2A2 164 aa13.9□□□□□ -0.18
VARS-216ENST00000428445 A0A0G2JND7 137 aa13.9□□□□□ -0.18
VARS-216ENST00000428445 MDFIC2A0A1B0GVS7 189 aa13.9□□□□□ -0.18
VARS-216ENST00000428445 PPIAL4DF5H284 164 aa13.9□□□□□ -0.18
VARS-216ENST00000428445 FXYD1O00168 92 aa13.9□□□□□ -0.18
VARS-216ENST00000428445 IMPA2O14732 288 aa13.9□□□□□ -0.18
VARS-216ENST00000428445 PPIAL4FP0DN26 164 aa13.9□□□□□ -0.18
VARS-216ENST00000428445 OMGP23515 440 aa13.9□□□□□ -0.18
VARS-216ENST00000428445 CD80P33681 288 aa13.9□□□□□ -0.18
VARS-216ENST00000428445 BTG1P62324 171 aa13.9□□□□□ -0.18
VARS-216ENST00000428445 SELENOWP63302 87 aa13.9□□□□□ -0.18
VARS-216ENST00000428445 MAPRE2Q15555 327 aa13.9□□□□□ -0.18
VARS-216ENST00000428445 LRRC23Q53EV4 343 aaPredicted RBP13.9□□□□□ -0.18
VARS-216ENST00000428445 CYBRD1Q53TN4 286 aa13.9□□□□□ -0.18
VARS-216ENST00000428445 TBPL2Q6SJ96 375 aa13.9□□□□□ -0.18
VARS-216ENST00000428445 HDXQ7Z353 690 aa13.9□□□□□ -0.18
VARS-216ENST00000428445 ZER1Q7Z7L7 766 aa13.9□□□□□ -0.18
VARS-216ENST00000428445 PCYOX1LQ8NBM8 494 aa13.9□□□□□ -0.18
VARS-216ENST00000428445 OR13C2Q8NGS9 318 aa13.9□□□□□ -0.18
VARS-216ENST00000428445 C10orf82Q8WW14 230 aa13.9□□□□□ -0.18
VARS-216ENST00000428445 SAMD8Q96LT4 415 aa13.9□□□□□ -0.18
VARS-216ENST00000428445 POLE4Q9NR33 117 aa13.9□□□□□ -0.18
VARS-216ENST00000428445 AP3M1Q9Y2T2 418 aa13.9□□□□□ -0.18
VARS-216ENST00000428445 DOCK11Q5JSL3 2073 aa13.9□□□□□ -0.18
VARS-216ENST00000428445 F5H0A9 414 aaPredicted RBP13.89□□□□□ -0.19
VARS-216ENST00000428445 MSR1P21757 451 aa13.89□□□□□ -0.19
VARS-216ENST00000428445 KDELR2P33947 212 aa13.89□□□□□ -0.19
VARS-216ENST00000428445 HTR5AP47898 357 aa13.89□□□□□ -0.19
VARS-216ENST00000428445 DEFA6Q01524 100 aa13.89□□□□□ -0.19
VARS-216ENST00000428445 SRSF4Q08170 494 aaKnown RBP13.89□□□□□ -0.19
VARS-216ENST00000428445 HLXQ14774 488 aaPredicted RBP13.89□□□□□ -0.19
VARS-216ENST00000428445 SLC9A3R2Q15599 337 aa13.89□□□□□ -0.19
VARS-216ENST00000428445 ZMAT1Q5H9K5 638 aa13.89□□□□□ -0.19
VARS-216ENST00000428445 NRMQ8IXM6 262 aa13.89□□□□□ -0.19
VARS-216ENST00000428445 RNF113BQ8IZP6 322 aaKnown RBP13.89□□□□□ -0.19
VARS-216ENST00000428445 SPICQ8N5J4 248 aa13.89□□□□□ -0.19
VARS-216ENST00000428445 LZICQ8WZA0 190 aa13.89□□□□□ -0.19
VARS-216ENST00000428445 OR2V2Q96R30 315 aa13.89□□□□□ -0.19
VARS-216ENST00000428445 MS4A7Q9GZW8 240 aaPredicted RBP13.89□□□□□ -0.19
VARS-216ENST00000428445 PPP1R3CQ9UQK1 317 aa13.89□□□□□ -0.19
VARS-216ENST00000428445 POLR3KQ9Y2Y1 108 aaPredicted RBP13.89□□□□□ -0.19
VARS-216ENST00000428445 ADAM18Q9Y3Q7 739 aa13.89□□□□□ -0.19
VARS-216ENST00000428445 TGP01266 2768 aa13.88□□□□□ -0.19
VARS-216ENST00000428445 A6NIZ1 184 aa13.88□□□□□ -0.19
VARS-216ENST00000428445 CEACAM18A8MTB9 384 aa13.88□□□□□ -0.19
VARS-216ENST00000428445 C12orf71A8MTZ7 269 aa13.88□□□□□ -0.19
VARS-216ENST00000428445 H0YL77 283 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms